RNA–Protein interactions for RNA: ENST00000590701.5

ERCC1-211, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, human

TSL 3

Gene ERCC1, Length 345 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERCC1-211	ENST00000590701	ZNF449	Q6P9G9	518 aa		13.99	□□□□□ -0.17
ERCC1-211	ENST00000590701	SNX20	Q7Z614	316 aa		13.99	□□□□□ -0.17
ERCC1-211	ENST00000590701	CCDC110	Q8TBZ0	833 aa		13.99	□□□□□ -0.17
ERCC1-211	ENST00000590701	BRIX1	Q8TDN6	353 aa	Known RBP	13.99	□□□□□ -0.17
ERCC1-211	ENST00000590701	ADAMTS18	Q8TE60	1221 aa		13.99	□□□□□ -0.17
ERCC1-211	ENST00000590701	DLG3	Q92796	817 aa		13.99	□□□□□ -0.17
ERCC1-211	ENST00000590701	HAS2	Q92819	552 aa		13.99	□□□□□ -0.17
ERCC1-211	ENST00000590701	ULK4	Q96C45	1275 aa		13.99	□□□□□ -0.17
ERCC1-211	ENST00000590701	FSD1L	Q9BXM9	530 aa		13.99	□□□□□ -0.17
ERCC1-211	ENST00000590701	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	13.99	□□□□□ -0.17
ERCC1-211	ENST00000590701	MRM3	Q9HC36	420 aa	Known RBP	13.99	□□□□□ -0.17
ERCC1-211	ENST00000590701	SEMA3G	Q9NS98	782 aa		13.99	□□□□□ -0.17
ERCC1-211	ENST00000590701	ZDHHC3	Q9NYG2	299 aa		13.99	□□□□□ -0.17
ERCC1-211	ENST00000590701	STOX2	Q9P2F5	926 aa	Predicted RBP	13.99	□□□□□ -0.17
ERCC1-211	ENST00000590701	CIDEB	Q9UHD4	219 aa		13.99	□□□□□ -0.17
ERCC1-211	ENST00000590701	RSPH14	Q9UHP6	348 aa		13.99	□□□□□ -0.17
ERCC1-211	ENST00000590701	NEU2	Q9Y3R4	380 aa		13.99	□□□□□ -0.17
ERCC1-211	ENST00000590701	C5orf60	A6NFR6	353 aa		13.98	□□□□□ -0.17
ERCC1-211	ENST00000590701	MED26	O95402	600 aa		13.98	□□□□□ -0.17
ERCC1-211	ENST00000590701	HP	P00738	406 aa		13.98	□□□□□ -0.17
ERCC1-211	ENST00000590701	CELA2A	P08217	269 aa		13.98	□□□□□ -0.17
ERCC1-211	ENST00000590701	ITGAL	P20701	1170 aa		13.98	□□□□□ -0.17
ERCC1-211	ENST00000590701	NR2C2	P49116	596 aa		13.98	□□□□□ -0.17
ERCC1-211	ENST00000590701	PMP22	Q01453	160 aa		13.98	□□□□□ -0.17
ERCC1-211	ENST00000590701	TYRO3	Q06418	890 aa		13.98	□□□□□ -0.17
ERCC1-211	ENST00000590701	KLC1	Q07866	573 aa		13.98	□□□□□ -0.17
ERCC1-211	ENST00000590701	RPA4	Q13156	261 aa		13.98	□□□□□ -0.17
ERCC1-211	ENST00000590701	C3AR1	Q16581	482 aa		13.98	□□□□□ -0.17
ERCC1-211	ENST00000590701	RANBP10	Q6VN20	620 aa		13.98	□□□□□ -0.17
ERCC1-211	ENST00000590701	RPTN	Q6XPR3	784 aa		13.98	□□□□□ -0.17
ERCC1-211	ENST00000590701	ARHGEF18	Q6ZSZ5	1173 aa		13.98	□□□□□ -0.17
ERCC1-211	ENST00000590701	NCCRP1	Q6ZVX7	275 aa	Predicted RBP	13.98	□□□□□ -0.17
ERCC1-211	ENST00000590701	TAS2R42	Q7RTR8	314 aa		13.98	□□□□□ -0.17
ERCC1-211	ENST00000590701	CDH24	Q86UP0	819 aa		13.98	□□□□□ -0.17
ERCC1-211	ENST00000590701	LAPTM4B	Q86VI4	370 aa		13.98	□□□□□ -0.17
ERCC1-211	ENST00000590701	SERPINA9	Q86WD7	417 aa		13.98	□□□□□ -0.17
ERCC1-211	ENST00000590701	VSIG1	Q86XK7	387 aa		13.98	□□□□□ -0.17
ERCC1-211	ENST00000590701	KBTBD2	Q8IY47	623 aa		13.98	□□□□□ -0.17
ERCC1-211	ENST00000590701	SLC35G2	Q8TBE7	412 aa		13.98	□□□□□ -0.17
ERCC1-211	ENST00000590701	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	13.98	□□□□□ -0.17
ERCC1-211	ENST00000590701	HAUS1	Q96CS2	278 aa		13.98	□□□□□ -0.17
ERCC1-211	ENST00000590701	MTFMT	Q96DP5	389 aa	Known RBP	13.98	□□□□□ -0.17
ERCC1-211	ENST00000590701	CRB3	Q9BUF7	120 aa		13.98	□□□□□ -0.17
ERCC1-211	ENST00000590701	OR6C2	Q9NZP2	312 aa		13.98	□□□□□ -0.17
ERCC1-211	ENST00000590701	PRSS21	Q9Y6M0	314 aa		13.98	□□□□□ -0.17
ERCC1-211	ENST00000590701	IGLV3-16	A0A075B6K0	115 aa		13.97	□□□□□ -0.17
ERCC1-211	ENST00000590701	BHMG1	C9JSJ3	638 aa	Predicted RBP	13.97	□□□□□ -0.17
ERCC1-211	ENST00000590701	ZNHIT1	O43257	154 aa		13.97	□□□□□ -0.17
ERCC1-211	ENST00000590701	RASAL1	O95294	804 aa		13.97	□□□□□ -0.17
ERCC1-211	ENST00000590701	WDPCP	O95876	746 aa		13.97	□□□□□ -0.17
ERCC1-211	ENST00000590701	PRR35	P0CG20	571 aa		13.97	□□□□□ -0.17
ERCC1-211	ENST00000590701	ESRRA	P11474	423 aa	Predicted RBP	13.97	□□□□□ -0.17
ERCC1-211	ENST00000590701	CAPN3	P20807	821 aa		13.97	□□□□□ -0.17
ERCC1-211	ENST00000590701	MC4R	P32245	332 aa		13.97	□□□□□ -0.17
ERCC1-211	ENST00000590701	SOX11	P35716	441 aa		13.97	□□□□□ -0.17
ERCC1-211	ENST00000590701	CDKN2B	P42772	138 aa		13.97	□□□□□ -0.17
ERCC1-211	ENST00000590701	ZBED6	P86452	979 aa		13.97	□□□□□ -0.17
ERCC1-211	ENST00000590701	TLE4	Q04727	773 aa		13.97	□□□□□ -0.17
ERCC1-211	ENST00000590701	ODF2	Q5BJF6	829 aa		13.97	□□□□□ -0.17
ERCC1-211	ENST00000590701	ATG9B	Q674R7	924 aa		13.97	□□□□□ -0.17
ERCC1-211	ENST00000590701	MTFR2	Q6P444	385 aa		13.97	□□□□□ -0.17
ERCC1-211	ENST00000590701	BZW1	Q7L1Q6	419 aa	Known RBP	13.97	□□□□□ -0.17
ERCC1-211	ENST00000590701	TBC1D21	Q8IYX1	336 aa		13.97	□□□□□ -0.17
ERCC1-211	ENST00000590701	STT3B	Q8TCJ2	826 aa		13.97	□□□□□ -0.17
ERCC1-211	ENST00000590701	HEXDC	Q8WVB3	486 aa		13.97	□□□□□ -0.17
ERCC1-211	ENST00000590701	ABI3	Q9P2A4	366 aa		13.97	□□□□□ -0.17
ERCC1-211	ENST00000590701	POLG2	Q9UHN1	485 aa		13.97	□□□□□ -0.17
ERCC1-211	ENST00000590701	TINAG	Q9UJW2	476 aa		13.97	□□□□□ -0.17
ERCC1-211	ENST00000590701	CPAMD8	Q8IZJ3	1885 aa		13.97	□□□□□ -0.17
ERCC1-211	ENST00000590701	SMTNL1	A8MU46	457 aa		13.96	□□□□□ -0.17
ERCC1-211	ENST00000590701	SERPINC1	P01008	464 aa		13.96	□□□□□ -0.17
ERCC1-211	ENST00000590701	ACPP	P15309	386 aa		13.96	□□□□□ -0.17
ERCC1-211	ENST00000590701	ACRV1	P26436	265 aa		13.96	□□□□□ -0.17
ERCC1-211	ENST00000590701	ADRA1A	P35348	466 aa		13.96	□□□□□ -0.17
ERCC1-211	ENST00000590701	ZNF140	P52738	457 aa	Predicted RBP	13.96	□□□□□ -0.17
ERCC1-211	ENST00000590701	GEM	P55040	296 aa		13.96	□□□□□ -0.17
ERCC1-211	ENST00000590701	CSE1L	P55060	971 aa	Known RBP	13.96	□□□□□ -0.17
ERCC1-211	ENST00000590701	FANCC	Q00597	558 aa		13.96	□□□□□ -0.17
ERCC1-211	ENST00000590701	SPARCL1	Q14515	664 aa		13.96	□□□□□ -0.17
ERCC1-211	ENST00000590701	KIR2DS3	Q14952	304 aa		13.96	□□□□□ -0.17
ERCC1-211	ENST00000590701	TFDP3	Q5H9I0	405 aa		13.96	□□□□□ -0.17
ERCC1-211	ENST00000590701	FIGLA	Q6QHK4	219 aa		13.96	□□□□□ -0.17
ERCC1-211	ENST00000590701	TAX1BP1	Q86VP1	789 aa		13.96	□□□□□ -0.17
ERCC1-211	ENST00000590701	CEP97	Q8IW35	865 aa		13.96	□□□□□ -0.17
ERCC1-211	ENST00000590701	LINC01555	Q8NAE3	123 aa		13.96	□□□□□ -0.17
ERCC1-211	ENST00000590701	OR5K2	Q8NHB8	316 aa		13.96	□□□□□ -0.17
ERCC1-211	ENST00000590701	DNAJB8	Q8NHS0	232 aa		13.96	□□□□□ -0.17
ERCC1-211	ENST00000590701	ELMO1	Q92556	727 aa		13.96	□□□□□ -0.17
ERCC1-211	ENST00000590701	VPS50	Q96JG6	964 aa		13.96	□□□□□ -0.17
ERCC1-211	ENST00000590701	VPS37B	Q9H9H4	285 aa		13.96	□□□□□ -0.17
ERCC1-211	ENST00000590701	CAMSAP3	Q9P1Y5	1249 aa	Predicted RBP	13.96	□□□□□ -0.17
ERCC1-211	ENST00000590701	C3orf18	Q9UK00	162 aa		13.96	□□□□□ -0.17
ERCC1-211	ENST00000590701	NXT1	Q9UKK6	140 aa	Known RBP	13.96	□□□□□ -0.17
ERCC1-211	ENST00000590701	CAPN11	Q9UMQ6	739 aa		13.96	□□□□□ -0.17
ERCC1-211	ENST00000590701	NSG1	A0A0A6YYJ2	146 aa		13.95	□□□□□ -0.18
ERCC1-211	ENST00000590701	TRBV5-4	A0A0C4DH59	114 aa		13.95	□□□□□ -0.18
ERCC1-211	ENST00000590701	MAP2K7	O14733	419 aa		13.95	□□□□□ -0.18
ERCC1-211	ENST00000590701	FFAR3	O14843	346 aa		13.95	□□□□□ -0.18
ERCC1-211	ENST00000590701	GPR42	O15529	346 aa		13.95	□□□□□ -0.18
ERCC1-211	ENST00000590701	SLC19A2	O60779	497 aa		13.95	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms