RNA–Protein interactions for RNA: ENST00000588937.5

MBD1-217, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 1,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-217ENST00000588937 CCR3P51677 355 aa14.87□□□□□ -0.03
MBD1-217ENST00000588937 CLDN8P56748 225 aa14.87□□□□□ -0.03
MBD1-217ENST00000588937 YBX1P67809 324 aaKnown RBP14.87□□□□□ -0.03
MBD1-217ENST00000588937 PRKCQQ04759 706 aa14.87□□□□□ -0.03
MBD1-217ENST00000588937 NRF1Q16656 503 aa14.87□□□□□ -0.03
MBD1-217ENST00000588937 POM121L1PQ3SYA9 428 aa14.87□□□□□ -0.03
MBD1-217ENST00000588937 C6orf52Q5T4I8 152 aa14.87□□□□□ -0.03
MBD1-217ENST00000588937 NEK5Q6P3R8 708 aa14.87□□□□□ -0.03
MBD1-217ENST00000588937 SPRED2Q7Z698 418 aa14.87□□□□□ -0.03
MBD1-217ENST00000588937 C12orf40Q86WS4 652 aa14.87□□□□□ -0.03
MBD1-217ENST00000588937 RASGEF1AQ8N9B8 481 aa14.87□□□□□ -0.03
MBD1-217ENST00000588937 DTD2Q96FN9 168 aa14.87□□□□□ -0.03
MBD1-217ENST00000588937 CENPNQ96H22 339 aaPredicted RBP14.87□□□□□ -0.03
MBD1-217ENST00000588937 PPP1R16AQ96I34 528 aa14.87□□□□□ -0.03
MBD1-217ENST00000588937 NSMCE2Q96MF7 247 aa14.87□□□□□ -0.03
MBD1-217ENST00000588937 TRIM8Q9BZR9 551 aa14.87□□□□□ -0.03
MBD1-217ENST00000588937 LMAN2LQ9H0V9 348 aa14.87□□□□□ -0.03
MBD1-217ENST00000588937 PDE4DIPQ5VU43 2346 aa14.87□□□□□ -0.03
MBD1-217ENST00000588937 SLC5A10A0PJK1 596 aa14.86□□□□□ -0.03
MBD1-217ENST00000588937 TSPAN6O43657 245 aa14.86□□□□□ -0.03
MBD1-217ENST00000588937 FAM58BPP0C7Q3 252 aa14.86□□□□□ -0.03
MBD1-217ENST00000588937 MTHFD1P11586 935 aaKnown RBP14.86□□□□□ -0.03
MBD1-217ENST00000588937 PFN3P60673 137 aa14.86□□□□□ -0.03
MBD1-217ENST00000588937 GRIN2CQ14957 1233 aa14.86□□□□□ -0.03
MBD1-217ENST00000588937 ZXDCQ2QGD7 858 aaPredicted RBP14.86□□□□□ -0.03
MBD1-217ENST00000588937 HNRNPA1L2Q32P51 320 aaKnown RBP14.86□□□□□ -0.03
MBD1-217ENST00000588937 FRG2Q64ET8 278 aa14.86□□□□□ -0.03
MBD1-217ENST00000588937 GLYATQ6IB77 296 aa14.86□□□□□ -0.03
MBD1-217ENST00000588937 ZNF765Q7L2R6 523 aa14.86□□□□□ -0.03
MBD1-217ENST00000588937 KLHDC8AQ8IYD2 350 aa14.86□□□□□ -0.03
MBD1-217ENST00000588937 ZNF366Q8N895 744 aa14.86□□□□□ -0.03
MBD1-217ENST00000588937 GTF2H4Q92759 462 aa14.86□□□□□ -0.03
MBD1-217ENST00000588937 SMARCD2Q92925 531 aa14.86□□□□□ -0.03
MBD1-217ENST00000588937 PYCR2Q96C36 320 aa14.86□□□□□ -0.03
MBD1-217ENST00000588937 COQ10AQ96MF6 247 aa14.86□□□□□ -0.03
MBD1-217ENST00000588937 FRG2BQ96QU4 278 aa14.86□□□□□ -0.03
MBD1-217ENST00000588937 CIB1Q99828 191 aa14.86□□□□□ -0.03
MBD1-217ENST00000588937 RMND5AQ9H871 391 aa14.86□□□□□ -0.03
MBD1-217ENST00000588937 YBX2Q9Y2T7 364 aaKnown RBP14.86□□□□□ -0.03
MBD1-217ENST00000588937 ERN1O75460 977 aaKnown RBP14.85□□□□□ -0.03
MBD1-217ENST00000588937 ITPKAP23677 461 aa14.85□□□□□ -0.03
MBD1-217ENST00000588937 VIPR2P41587 438 aa14.85□□□□□ -0.03
MBD1-217ENST00000588937 IRF8Q02556 426 aa14.85□□□□□ -0.03
MBD1-217ENST00000588937 ABRQ12979 859 aa14.85□□□□□ -0.03
MBD1-217ENST00000588937 CSTF3Q12996 717 aaKnown RBP14.85□□□□□ -0.03
MBD1-217ENST00000588937 CHIT1Q13231 466 aa14.85□□□□□ -0.03
MBD1-217ENST00000588937 ELAVL3Q14576 367 aaKnown RBP14.85□□□□□ -0.03
MBD1-217ENST00000588937 SPANXN4Q5MJ08 99 aa14.85□□□□□ -0.03
MBD1-217ENST00000588937 TMTC4Q5T4D3 741 aa14.85□□□□□ -0.03
MBD1-217ENST00000588937 ZNF648Q5T619 568 aaPredicted RBP14.85□□□□□ -0.03
MBD1-217ENST00000588937 TMEM220Q6QAJ8 160 aa14.85□□□□□ -0.03
MBD1-217ENST00000588937 SUSD1Q6UWL2 747 aa14.85□□□□□ -0.03
MBD1-217ENST00000588937 CSGALNACT1Q8TDX6 532 aa14.85□□□□□ -0.03
MBD1-217ENST00000588937 RSPRY1Q96DX4 576 aa14.85□□□□□ -0.03
MBD1-217ENST00000588937 ASB16Q96NS5 453 aa14.85□□□□□ -0.03
MBD1-217ENST00000588937 CCDC115Q96NT0 180 aa14.85□□□□□ -0.03
MBD1-217ENST00000588937 OR52E6Q96RD3 313 aa14.85□□□□□ -0.03
MBD1-217ENST00000588937 ATG10Q9H0Y0 220 aa14.85□□□□□ -0.03
MBD1-217ENST00000588937 SFXN1Q9H9B4 322 aa14.85□□□□□ -0.03
MBD1-217ENST00000588937 THG1LQ9NWX6 298 aaKnown RBP14.85□□□□□ -0.03
MBD1-217ENST00000588937 OBP2AQ9NY56 170 aa14.85□□□□□ -0.03
MBD1-217ENST00000588937 UBAP1Q9NZ09 502 aa14.85□□□□□ -0.03
MBD1-217ENST00000588937 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.85□□□□□ -0.03
MBD1-217ENST00000588937 TRANK1O15050 2925 aa14.85□□□□□ -0.03
MBD1-217ENST00000588937 RANBP2P49792 3224 aaKnown RBP14.85□□□□□ -0.03
MBD1-217ENST00000588937 C7orf72A4D263 438 aa14.85□□□□□ -0.03
MBD1-217ENST00000588937 ARHGEF33A8MVX0 844 aa14.85□□□□□ -0.03
MBD1-217ENST00000588937 PRRT4C9JH25 899 aa14.85□□□□□ -0.03
MBD1-217ENST00000588937 KIF1CO43896 1103 aaKnown RBP14.85□□□□□ -0.03
MBD1-217ENST00000588937 C7P10643 843 aa14.85□□□□□ -0.03
MBD1-217ENST00000588937 NCK1P16333 377 aa14.85□□□□□ -0.03
MBD1-217ENST00000588937 S100A3P33764 101 aa14.85□□□□□ -0.03
MBD1-217ENST00000588937 CTSCP53634 463 aa14.85□□□□□ -0.03
MBD1-217ENST00000588937 MTPNP58546 118 aa14.85□□□□□ -0.03
MBD1-217ENST00000588937 TXNL4AP83876 142 aaKnown RBP14.85□□□□□ -0.03
MBD1-217ENST00000588937 PDGFRLQ15198 375 aa14.85□□□□□ -0.03
MBD1-217ENST00000588937 RAB30Q15771 203 aa14.85□□□□□ -0.03
MBD1-217ENST00000588937 FAM78AQ5JUQ0 283 aa14.85□□□□□ -0.03
MBD1-217ENST00000588937 C9orf64Q5T6V5 341 aa14.85□□□□□ -0.03
MBD1-217ENST00000588937 RNF220Q5VTB9 566 aa14.85□□□□□ -0.03
MBD1-217ENST00000588937 TMC5Q6UXY8 1006 aa14.85□□□□□ -0.03
MBD1-217ENST00000588937 MSANTD1Q6ZTZ1 278 aa14.85□□□□□ -0.03
MBD1-217ENST00000588937 NLRP8Q86W28 1048 aa14.85□□□□□ -0.03
MBD1-217ENST00000588937 THOC6Q86W42 341 aaKnown RBP14.85□□□□□ -0.03
MBD1-217ENST00000588937 RALGPS2Q86X27 583 aaPredicted RBP14.85□□□□□ -0.03
MBD1-217ENST00000588937 SLC22A15Q8IZD6 547 aa14.85□□□□□ -0.03
MBD1-217ENST00000588937 POP5Q969H6 163 aaKnown RBP14.85□□□□□ -0.03
MBD1-217ENST00000588937 NXPE3Q969Y0 559 aa14.85□□□□□ -0.03
MBD1-217ENST00000588937 BIRC7Q96CA5 298 aa14.85□□□□□ -0.03
MBD1-217ENST00000588937 METTL2AQ96IZ6 378 aaKnown RBP14.85□□□□□ -0.03
MBD1-217ENST00000588937 WRAP53Q9BUR4 548 aaKnown RBP14.85□□□□□ -0.03
MBD1-217ENST00000588937 PBX4Q9BYU1 374 aa14.85□□□□□ -0.03
MBD1-217ENST00000588937 ZNF696Q9H7X3 374 aa14.85□□□□□ -0.03
MBD1-217ENST00000588937 DYRK4Q9NR20 520 aa14.85□□□□□ -0.03
MBD1-217ENST00000588937 NDUFA13Q9P0J0 144 aa14.85□□□□□ -0.03
MBD1-217ENST00000588937 VAPAQ9P0L0 249 aa14.85□□□□□ -0.03
MBD1-217ENST00000588937 CLGNO14967 610 aa14.84□□□□□ -0.03
MBD1-217ENST00000588937 ANXA6P08133 673 aa14.84□□□□□ -0.03
MBD1-217ENST00000588937 CDH1P12830 882 aa14.84□□□□□ -0.03
MBD1-217ENST00000588937 GGT1P19440 569 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms