RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 TWSG1Q9GZX9 223 aa18.37■□□□□ 0.53
CLPTM1-209ENST00000588855 RAB33BQ9H082 229 aa18.37■□□□□ 0.53
CLPTM1-209ENST00000588855 PCMTD2Q9NV79 361 aa18.37■□□□□ 0.53
CLPTM1-209ENST00000588855 UTP6Q9NYH9 597 aaKnown RBP18.37■□□□□ 0.53
CLPTM1-209ENST00000588855 EPHA6Q9UF33 1036 aa18.37■□□□□ 0.53
CLPTM1-209ENST00000588855 NOVA2Q9UNW9 492 aaKnown RBP18.37■□□□□ 0.53
CLPTM1-209ENST00000588855 ADAMTS20P59510 1910 aa18.36■□□□□ 0.53
CLPTM1-209ENST00000588855 PIPSLA2A3N6 862 aa18.36■□□□□ 0.53
CLPTM1-209ENST00000588855 KIF1CO43896 1103 aaKnown RBP18.36■□□□□ 0.53
CLPTM1-209ENST00000588855 KLHL2O95198 593 aa18.36■□□□□ 0.53
CLPTM1-209ENST00000588855 C9P02748 559 aa18.36■□□□□ 0.53
CLPTM1-209ENST00000588855 ENO2P09104 434 aaPredicted RBP18.36■□□□□ 0.53
CLPTM1-209ENST00000588855 HIST1H2AGP0C0S8 130 aaPredicted RBP18.36■□□□□ 0.53
CLPTM1-209ENST00000588855 THRAP10827 490 aa18.36■□□□□ 0.53
CLPTM1-209ENST00000588855 TFEBP19484 476 aa18.36■□□□□ 0.53
CLPTM1-209ENST00000588855 HIST1H2ADP20671 130 aa18.36■□□□□ 0.53
CLPTM1-209ENST00000588855 IMPA1P29218 277 aa18.36■□□□□ 0.53
CLPTM1-209ENST00000588855 KPNA2P52292 529 aaKnown RBP18.36■□□□□ 0.53
CLPTM1-209ENST00000588855 ZFP36L1Q07352 338 aaKnown RBP18.36■□□□□ 0.53
CLPTM1-209ENST00000588855 FASTKQ14296 549 aaKnown RBP18.36■□□□□ 0.53
CLPTM1-209ENST00000588855 CYP2A13Q16696 494 aa18.36■□□□□ 0.53
CLPTM1-209ENST00000588855 ISXQ2M1V0 245 aa18.36■□□□□ 0.53
CLPTM1-209ENST00000588855 ANKS6Q68DC2 871 aa18.36■□□□□ 0.53
CLPTM1-209ENST00000588855 FAM92BQ6ZTR7 304 aa18.36■□□□□ 0.53
CLPTM1-209ENST00000588855 TMPRSS7Q7RTY8 843 aa18.36■□□□□ 0.53
CLPTM1-209ENST00000588855 TMPRSS12Q86WS5 348 aa18.36■□□□□ 0.53
CLPTM1-209ENST00000588855 IQCKQ8N0W5 287 aa18.36■□□□□ 0.53
CLPTM1-209ENST00000588855 GALNT15Q8N3T1 639 aa18.36■□□□□ 0.53
CLPTM1-209ENST00000588855 RIBC1Q8N443 379 aaPredicted RBP18.36■□□□□ 0.53
CLPTM1-209ENST00000588855 ZNF480Q8WV37 535 aa18.36■□□□□ 0.53
CLPTM1-209ENST00000588855 HIST1H2AHQ96KK5 128 aa18.36■□□□□ 0.53
CLPTM1-209ENST00000588855 CCDC74BQ96LY2 380 aa18.36■□□□□ 0.53
CLPTM1-209ENST00000588855 ZIM3Q96PE6 472 aa18.36■□□□□ 0.53
CLPTM1-209ENST00000588855 HIST1H2AJQ99878 128 aa18.36■□□□□ 0.53
CLPTM1-209ENST00000588855 H2AFJQ9BTM1 129 aa18.36■□□□□ 0.53
CLPTM1-209ENST00000588855 ROPN1BQ9BZX4 212 aaPredicted RBP18.36■□□□□ 0.53
CLPTM1-209ENST00000588855 ALG9Q9H6U8 611 aa18.36■□□□□ 0.53
CLPTM1-209ENST00000588855 ROPN1Q9HAT0 212 aaPredicted RBP18.36■□□□□ 0.53
CLPTM1-209ENST00000588855 NMRAL1Q9HBL8 299 aa18.36■□□□□ 0.53
CLPTM1-209ENST00000588855 ACTR10Q9NZ32 417 aa18.36■□□□□ 0.53
CLPTM1-209ENST00000588855 LNPEPQ9UIQ6 1025 aa18.36■□□□□ 0.53
CLPTM1-209ENST00000588855 POMT2Q9UKY4 750 aa18.36■□□□□ 0.53
CLPTM1-209ENST00000588855 OARD1Q9Y530 152 aa18.36■□□□□ 0.53
CLPTM1-209ENST00000588855 A0A1W2PPM1 405 aa18.35■□□□□ 0.53
CLPTM1-209ENST00000588855 PABPN1LA6NDY0 278 aaKnown RBP18.35■□□□□ 0.53
CLPTM1-209ENST00000588855 C2orf74A8MZ97 194 aa18.35■□□□□ 0.53
CLPTM1-209ENST00000588855 GOLGA8RI6L899 631 aa18.35■□□□□ 0.53
CLPTM1-209ENST00000588855 GUCA1CO95843 209 aa18.35■□□□□ 0.53
CLPTM1-209ENST00000588855 KRT15P19012 456 aa18.35■□□□□ 0.53
CLPTM1-209ENST00000588855 GLRBP48167 497 aa18.35■□□□□ 0.53
CLPTM1-209ENST00000588855 PNLIPRP1P54315 467 aa18.35■□□□□ 0.53
CLPTM1-209ENST00000588855 INHBCP55103 352 aa18.35■□□□□ 0.53
CLPTM1-209ENST00000588855 AP1S2P56377 157 aa18.35■□□□□ 0.53
CLPTM1-209ENST00000588855 ZNF844Q08AG5 666 aa18.35■□□□□ 0.53
CLPTM1-209ENST00000588855 PHF19Q5T6S3 580 aa18.35■□□□□ 0.53
CLPTM1-209ENST00000588855 FBXO38Q6PIJ6 1188 aa18.35■□□□□ 0.53
CLPTM1-209ENST00000588855 FRA10AC1Q70Z53 315 aa18.35■□□□□ 0.53
CLPTM1-209ENST00000588855 CLEC14AQ86T13 490 aa18.35■□□□□ 0.53
CLPTM1-209ENST00000588855 ISCA2Q86U28 154 aa18.35■□□□□ 0.53
CLPTM1-209ENST00000588855 PPFIBP2Q8ND30 876 aa18.35■□□□□ 0.53
CLPTM1-209ENST00000588855 RCBTB1Q8NDN9 531 aa18.35■□□□□ 0.53
CLPTM1-209ENST00000588855 HMGCLL1Q8TB92 370 aa18.35■□□□□ 0.53
CLPTM1-209ENST00000588855 KIAA1191Q96A73 305 aa18.35■□□□□ 0.53
CLPTM1-209ENST00000588855 ZDHHC12Q96GR4 267 aa18.35■□□□□ 0.53
CLPTM1-209ENST00000588855 CCDC138Q96M89 665 aa18.35■□□□□ 0.53
CLPTM1-209ENST00000588855 PPM1MQ96MI6 270 aa18.35■□□□□ 0.53
CLPTM1-209ENST00000588855 TMEM74Q96NL1 305 aa18.35■□□□□ 0.53
CLPTM1-209ENST00000588855 GPR78Q96P69 363 aa18.35■□□□□ 0.53
CLPTM1-209ENST00000588855 TMEM109Q9BVC6 243 aa18.35■□□□□ 0.53
CLPTM1-209ENST00000588855 TRIM54Q9BYV2 358 aa18.35■□□□□ 0.53
CLPTM1-209ENST00000588855 ZNF358Q9NW07 568 aa18.35■□□□□ 0.53
CLPTM1-209ENST00000588855 ARL15Q9NXU5 204 aa18.35■□□□□ 0.53
CLPTM1-209ENST00000588855 STOX2Q9P2F5 926 aaPredicted RBP18.35■□□□□ 0.53
CLPTM1-209ENST00000588855 PDP2Q9P2J9 529 aa18.35■□□□□ 0.53
CLPTM1-209ENST00000588855 ENTPD2Q9Y5L3 495 aa18.35■□□□□ 0.53
CLPTM1-209ENST00000588855 PCM1Q15154 2024 aa18.35■□□□□ 0.53
CLPTM1-209ENST00000588855 KNTC1P50748 2209 aa18.34■□□□□ 0.53
CLPTM1-209ENST00000588855 A8MU76 341 aa18.34■□□□□ 0.53
CLPTM1-209ENST00000588855 MATN2O00339 956 aa18.34■□□□□ 0.53
CLPTM1-209ENST00000588855 JUPP14923 745 aa18.34■□□□□ 0.53
CLPTM1-209ENST00000588855 CCKBRP32239 447 aa18.34■□□□□ 0.53
CLPTM1-209ENST00000588855 TARDBPQ13148 414 aaKnown RBP eCLIP18.34■□□□□ 0.53
CLPTM1-209ENST00000588855 ARHGAP19Q14CB8 494 aa18.34■□□□□ 0.53
CLPTM1-209ENST00000588855 FAM83EQ2M2I3 478 aa18.34■□□□□ 0.53
CLPTM1-209ENST00000588855 SYTL1Q8IYJ3 562 aa18.34■□□□□ 0.53
CLPTM1-209ENST00000588855 CNPY4Q8N129 248 aa18.34■□□□□ 0.53
CLPTM1-209ENST00000588855 FLVCR1-AS1Q8TAF5 88 aa18.34■□□□□ 0.53
CLPTM1-209ENST00000588855 ZBTB9Q96C00 473 aa18.34■□□□□ 0.53
CLPTM1-209ENST00000588855 CABS1Q96KC9 395 aa18.34■□□□□ 0.53
CLPTM1-209ENST00000588855 OR2A14Q96R47 310 aa18.34■□□□□ 0.53
CLPTM1-209ENST00000588855 MAP3K3Q99759 626 aa18.34■□□□□ 0.53
CLPTM1-209ENST00000588855 LGALS13Q9UHV8 139 aa18.34■□□□□ 0.53
CLPTM1-209ENST00000588855 A0A1W2PPV9 198 aa18.33■□□□□ 0.53
CLPTM1-209ENST00000588855 ISM1B1AKI9 464 aa18.33■□□□□ 0.53
CLPTM1-209ENST00000588855 AGRPO00253 132 aa18.33■□□□□ 0.53
CLPTM1-209ENST00000588855 MT-ND3P03897 115 aa18.33■□□□□ 0.53
CLPTM1-209ENST00000588855 PYGBP11216 843 aa18.33■□□□□ 0.53
CLPTM1-209ENST00000588855 H2AFXP16104 143 aaPredicted RBP18.33■□□□□ 0.53
CLPTM1-209ENST00000588855 UGT2B7P16662 529 aa18.33■□□□□ 0.53
CLPTM1-209ENST00000588855 PSMB5P28074 263 aa18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms