RNA–Protein interactions for RNA: ENST00000587774.1

TRIM47-205, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 720 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-205ENST00000587774 ANAPC5Q9UJX4 755 aa18.08■□□□□ 0.48
TRIM47-205ENST00000587774 SRPK3Q9UPE1 567 aa18.08■□□□□ 0.48
TRIM47-205ENST00000587774 KLHL20Q9Y2M5 609 aa18.08■□□□□ 0.48
TRIM47-205ENST00000587774 ZNF451Q9Y4E5 1061 aa18.08■□□□□ 0.48
TRIM47-205ENST00000587774 PRMT5O14744 637 aaPredicted RBP18.07■□□□□ 0.48
TRIM47-205ENST00000587774 CD3EAPO15446 510 aaKnown RBP18.07■□□□□ 0.48
TRIM47-205ENST00000587774 RPN2P04844 631 aa18.07■□□□□ 0.48
TRIM47-205ENST00000587774 APOA4P06727 396 aa18.07■□□□□ 0.48
TRIM47-205ENST00000587774 AOAHP28039 575 aa18.07■□□□□ 0.48
TRIM47-205ENST00000587774 TTPAP49638 278 aa18.07■□□□□ 0.48
TRIM47-205ENST00000587774 RRADP55042 308 aa18.07■□□□□ 0.48
TRIM47-205ENST00000587774 FOXL2P58012 376 aa18.07■□□□□ 0.48
TRIM47-205ENST00000587774 BASP1P80723 227 aaKnown RBP18.07■□□□□ 0.48
TRIM47-205ENST00000587774 CCNG2Q16589 344 aa18.07■□□□□ 0.48
TRIM47-205ENST00000587774 PCID2Q5JVF3 399 aa18.07■□□□□ 0.48
TRIM47-205ENST00000587774 TLDC1Q6P9B6 456 aa18.07■□□□□ 0.48
TRIM47-205ENST00000587774 FAM26EQ8N5C1 309 aa18.07■□□□□ 0.48
TRIM47-205ENST00000587774 IL17FQ96PD4 163 aa18.07■□□□□ 0.48
TRIM47-205ENST00000587774 TXLNGQ9NUQ3 528 aa18.07■□□□□ 0.48
TRIM47-205ENST00000587774 GPR83Q9NYM4 423 aa18.07■□□□□ 0.48
TRIM47-205ENST00000587774 NDOR1Q9UHB4 597 aa18.07■□□□□ 0.48
TRIM47-205ENST00000587774 GPN3Q9UHW5 284 aaPredicted RBP18.07■□□□□ 0.48
TRIM47-205ENST00000587774 G3BP2Q9UN86 482 aaKnown RBP18.07■□□□□ 0.48
TRIM47-205ENST00000587774 PLCL2Q9UPR0 1127 aa18.07■□□□□ 0.48
TRIM47-205ENST00000587774 PTRH2Q9Y3E5 179 aaKnown RBP18.07■□□□□ 0.48
TRIM47-205ENST00000587774 PCDHGB7Q9Y5F8 929 aa18.07■□□□□ 0.48
TRIM47-205ENST00000587774 CNOT3O75175 753 aaKnown RBP18.06■□□□□ 0.48
TRIM47-205ENST00000587774 SLCO2B1O94956 709 aa18.06■□□□□ 0.48
TRIM47-205ENST00000587774 CD9P21926 228 aa18.06■□□□□ 0.48
TRIM47-205ENST00000587774 NMBRP28336 390 aa18.06■□□□□ 0.48
TRIM47-205ENST00000587774 FOLR3P41439 243 aa18.06■□□□□ 0.48
TRIM47-205ENST00000587774 DCDP81605 110 aaKnown RBP18.06■□□□□ 0.48
TRIM47-205ENST00000587774 RAPSNQ13702 412 aa18.06■□□□□ 0.48
TRIM47-205ENST00000587774 TMED2Q15363 201 aa18.06■□□□□ 0.48
TRIM47-205ENST00000587774 KCTD19Q17RG1 926 aaPredicted RBP18.06■□□□□ 0.48
TRIM47-205ENST00000587774 PTRHD1Q6GMV3 140 aaKnown RBP18.06■□□□□ 0.48
TRIM47-205ENST00000587774 DRICH1Q6PGQ1 229 aaPredicted RBP18.06■□□□□ 0.48
TRIM47-205ENST00000587774 ZGRF1Q86YA3 2104 aa18.06■□□□□ 0.48
TRIM47-205ENST00000587774 TMEM151BQ8IW70 566 aa18.06■□□□□ 0.48
TRIM47-205ENST00000587774 EFCAB3Q8N7B9 438 aa18.06■□□□□ 0.48
TRIM47-205ENST00000587774 IL22Q9GZX6 179 aa18.06■□□□□ 0.48
TRIM47-205ENST00000587774 P2RY12Q9H244 342 aa18.06■□□□□ 0.48
TRIM47-205ENST00000587774 LZTFL1Q9NQ48 299 aa18.06■□□□□ 0.48
TRIM47-205ENST00000587774 EURLQ9NYK6 297 aa18.06■□□□□ 0.48
TRIM47-205ENST00000587774 LUZP4Q9P127 313 aa18.06■□□□□ 0.48
TRIM47-205ENST00000587774 IFT80Q9P2H3 777 aaPredicted RBP18.06■□□□□ 0.48
TRIM47-205ENST00000587774 GNPTGQ9UJJ9 305 aa18.06■□□□□ 0.48
TRIM47-205ENST00000587774 CRYBG3Q68DQ2 2970 aa18.05■□□□□ 0.48
TRIM47-205ENST00000587774 SVILO95425 2214 aa18.05■□□□□ 0.48
TRIM47-205ENST00000587774 RASGRF2O14827 1237 aa18.05■□□□□ 0.48
TRIM47-205ENST00000587774 DPM1O60762 260 aa18.05■□□□□ 0.48
TRIM47-205ENST00000587774 GCGRP47871 477 aa18.05■□□□□ 0.48
TRIM47-205ENST00000587774 NKAIN1Q4KMZ8 207 aa18.05■□□□□ 0.48
TRIM47-205ENST00000587774 PRR30Q53SZ7 412 aaPredicted RBP18.05■□□□□ 0.48
TRIM47-205ENST00000587774 JMJD6Q6NYC1 403 aaPredicted RBP18.05■□□□□ 0.48
TRIM47-205ENST00000587774 MRPL14Q6P1L8 145 aaKnown RBP18.05■□□□□ 0.48
TRIM47-205ENST00000587774 Q8NA96 180 aa18.05■□□□□ 0.48
TRIM47-205ENST00000587774 OR2Y1Q8NGV0 311 aa18.05■□□□□ 0.48
TRIM47-205ENST00000587774 OR2L8Q8NGY9 312 aa18.05■□□□□ 0.48
TRIM47-205ENST00000587774 NDC1Q9BTX1 674 aa18.05■□□□□ 0.48
TRIM47-205ENST00000587774 RUVBL2Q9Y230 463 aaKnown RBP18.05■□□□□ 0.48
TRIM47-205ENST00000587774 ZKSCAN5Q9Y2L8 839 aa18.05■□□□□ 0.48
TRIM47-205ENST00000587774 SCN2AQ99250 2005 aa18.05■□□□□ 0.48
TRIM47-205ENST00000587774 KRT87PA6NCN2 255 aa18.04■□□□□ 0.48
TRIM47-205ENST00000587774 VPS4BO75351 444 aa18.04■□□□□ 0.48
TRIM47-205ENST00000587774 S1PR4O95977 384 aa18.04■□□□□ 0.48
TRIM47-205ENST00000587774 FGGP02679 453 aa18.04■□□□□ 0.48
TRIM47-205ENST00000587774 GNLYP22749 145 aa18.04■□□□□ 0.48
TRIM47-205ENST00000587774 MGAT1P26572 445 aa18.04■□□□□ 0.48
TRIM47-205ENST00000587774 ARNTP27540 789 aa18.04■□□□□ 0.48
TRIM47-205ENST00000587774 BDKRB1P46663 353 aa18.04■□□□□ 0.48
TRIM47-205ENST00000587774 KCNJ1P48048 391 aa18.04■□□□□ 0.48
TRIM47-205ENST00000587774 SSPNQ14714 243 aa18.04■□□□□ 0.48
TRIM47-205ENST00000587774 SLC6A19Q695T7 634 aa18.04■□□□□ 0.48
TRIM47-205ENST00000587774 GSTA5Q7RTV2 222 aa18.04■□□□□ 0.48
TRIM47-205ENST00000587774 MPP5Q8N3R9 675 aa18.04■□□□□ 0.48
TRIM47-205ENST00000587774 RBMXL3Q8N7X1 1067 aaKnown RBP18.04■□□□□ 0.48
TRIM47-205ENST00000587774 GALNT11Q8NCW6 608 aa18.04■□□□□ 0.48
TRIM47-205ENST00000587774 SLC22A18Q96BI1 424 aa18.04■□□□□ 0.48
TRIM47-205ENST00000587774 IP6K3Q96PC2 410 aa18.04■□□□□ 0.48
TRIM47-205ENST00000587774 PANX3Q96QZ0 392 aa18.04■□□□□ 0.48
TRIM47-205ENST00000587774 SMAD5Q99717 465 aaKnown RBP18.04■□□□□ 0.48
TRIM47-205ENST00000587774 MFRPQ9BY79 579 aa18.04■□□□□ 0.48
TRIM47-205ENST00000587774 SYBUQ9NX95 663 aa18.04■□□□□ 0.48
TRIM47-205ENST00000587774 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.04■□□□□ 0.48
TRIM47-205ENST00000587774 SLC39A10Q9ULF5 831 aa18.04■□□□□ 0.48
TRIM47-205ENST00000587774 VPS4AQ9UN37 437 aa18.04■□□□□ 0.48
TRIM47-205ENST00000587774 DRG1Q9Y295 367 aaKnown RBP18.04■□□□□ 0.48
TRIM47-205ENST00000587774 MAP4K5Q9Y4K4 846 aa18.04■□□□□ 0.48
TRIM47-205ENST00000587774 NFS1Q9Y697 457 aa18.04■□□□□ 0.48
TRIM47-205ENST00000587774 SCN3AQ9NY46 2000 aa18.04■□□□□ 0.48
TRIM47-205ENST00000587774 UMODP07911 640 aa18.03■□□□□ 0.48
TRIM47-205ENST00000587774 ITGAXP20702 1163 aa18.03■□□□□ 0.48
TRIM47-205ENST00000587774 RPS3P23396 243 aaKnown RBP eCLIP18.03■□□□□ 0.48
TRIM47-205ENST00000587774 EIF3BP55884 814 aaKnown RBP18.03■□□□□ 0.48
TRIM47-205ENST00000587774 CCSMST1Q4G0I0 132 aa18.03■□□□□ 0.48
TRIM47-205ENST00000587774 CTSL3PQ5NE16 218 aa18.03■□□□□ 0.48
TRIM47-205ENST00000587774 DCAF10Q5QP82 559 aa18.03■□□□□ 0.48
TRIM47-205ENST00000587774 FCRL6Q6DN72 434 aa18.03■□□□□ 0.48
TRIM47-205ENST00000587774 CES3Q6UWW8 571 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms