RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 PSMC3P17980 439 aa10.97□□□□□ -0.65
LIG3-204ENST00000585740 EPORP19235 508 aa10.97□□□□□ -0.65
LIG3-204ENST00000585740 TCN1P20061 433 aaPredicted RBP10.97□□□□□ -0.65
LIG3-204ENST00000585740 SLC6A2P23975 617 aa10.97□□□□□ -0.65
LIG3-204ENST00000585740 HSD3B2P26439 372 aa10.97□□□□□ -0.65
LIG3-204ENST00000585740 HNF4AP41235 474 aa10.97□□□□□ -0.65
LIG3-204ENST00000585740 HSPA13P48723 471 aa10.97□□□□□ -0.65
LIG3-204ENST00000585740 CTSCP53634 463 aa10.97□□□□□ -0.65
LIG3-204ENST00000585740 CSTF3Q12996 717 aaKnown RBP10.97□□□□□ -0.65
LIG3-204ENST00000585740 PWP1Q13610 501 aa10.97□□□□□ -0.65
LIG3-204ENST00000585740 GRAMD1BQ3KR37 738 aa10.97□□□□□ -0.65
LIG3-204ENST00000585740 TIGD2Q4W5G0 525 aa10.97□□□□□ -0.65
LIG3-204ENST00000585740 FAM219BQ5XKK7 198 aa10.97□□□□□ -0.65
LIG3-204ENST00000585740 LCN8Q6JVE9 175 aa10.97□□□□□ -0.65
LIG3-204ENST00000585740 CES5AQ6NT32 575 aa10.97□□□□□ -0.65
LIG3-204ENST00000585740 RNF111Q6ZNA4 994 aa10.97□□□□□ -0.65
LIG3-204ENST00000585740 PROSER1Q86XN7 944 aa10.97□□□□□ -0.65
LIG3-204ENST00000585740 HID1Q8IV36 788 aa10.97□□□□□ -0.65
LIG3-204ENST00000585740 APLFQ8IW19 511 aaPredicted RBP10.97□□□□□ -0.65
LIG3-204ENST00000585740 RGL4Q8IZJ4 473 aa10.97□□□□□ -0.65
LIG3-204ENST00000585740 ICA1LQ8NDH6 482 aa10.97□□□□□ -0.65
LIG3-204ENST00000585740 TMEM125Q96AQ2 219 aa10.97□□□□□ -0.65
LIG3-204ENST00000585740 P2RY13Q9BPV8 354 aa10.97□□□□□ -0.65
LIG3-204ENST00000585740 Q9H521 79 aa10.97□□□□□ -0.65
LIG3-204ENST00000585740 IGFLR1Q9H665 355 aa10.97□□□□□ -0.65
LIG3-204ENST00000585740 IL1RL2Q9HB29 575 aa10.97□□□□□ -0.65
LIG3-204ENST00000585740 TRIM39Q9HCM9 518 aa10.97□□□□□ -0.65
LIG3-204ENST00000585740 CMTM6Q9NX76 183 aa10.97□□□□□ -0.65
LIG3-204ENST00000585740 ACTR3BQ9P1U1 418 aa10.97□□□□□ -0.65
LIG3-204ENST00000585740 CNOT11Q9UKZ1 510 aaKnown RBP10.97□□□□□ -0.65
LIG3-204ENST00000585740 CNOT6Q9ULM6 557 aaKnown RBP10.97□□□□□ -0.65
LIG3-204ENST00000585740 MAPRE3Q9UPY8 281 aa10.97□□□□□ -0.65
LIG3-204ENST00000585740 ITM2BQ9Y287 266 aa10.97□□□□□ -0.65
LIG3-204ENST00000585740 AP4S1Q9Y587 144 aa10.97□□□□□ -0.65
LIG3-204ENST00000585740 CKAP5Q14008 2032 aa10.97□□□□□ -0.65
LIG3-204ENST00000585740 KLHL33A6NCF5 533 aa10.96□□□□□ -0.65
LIG3-204ENST00000585740 ASPDHA6ND91 283 aa10.96□□□□□ -0.65
LIG3-204ENST00000585740 OTOL1A6NHN0 477 aaPredicted RBP10.96□□□□□ -0.65
LIG3-204ENST00000585740 H3BM21 787 aa10.96□□□□□ -0.65
LIG3-204ENST00000585740 ANKRD28O15084 1053 aa10.96□□□□□ -0.65
LIG3-204ENST00000585740 INPP4BO15327 924 aa10.96□□□□□ -0.65
LIG3-204ENST00000585740 KCNH1O95259 989 aa10.96□□□□□ -0.65
LIG3-204ENST00000585740 ADH1BP00325 375 aa10.96□□□□□ -0.65
LIG3-204ENST00000585740 SOD1P00441 154 aa10.96□□□□□ -0.65
LIG3-204ENST00000585740 PDYNP01213 254 aa10.96□□□□□ -0.65
LIG3-204ENST00000585740 CAPNS1P04632 268 aa10.96□□□□□ -0.65
LIG3-204ENST00000585740 EPHX1P07099 455 aa10.96□□□□□ -0.65
LIG3-204ENST00000585740 UMPSP11172 480 aa10.96□□□□□ -0.65
LIG3-204ENST00000585740 POU3F3P20264 500 aaPredicted RBP10.96□□□□□ -0.65
LIG3-204ENST00000585740 IL10P22301 178 aa10.96□□□□□ -0.65
LIG3-204ENST00000585740 PEX2P28328 305 aa10.96□□□□□ -0.65
LIG3-204ENST00000585740 TEAD1P28347 426 aa10.96□□□□□ -0.65
LIG3-204ENST00000585740 HTR1EP28566 365 aa10.96□□□□□ -0.65
LIG3-204ENST00000585740 IL12AP29459 219 aa10.96□□□□□ -0.65
LIG3-204ENST00000585740 MSX2P35548 267 aaPredicted RBP10.96□□□□□ -0.65
LIG3-204ENST00000585740 HALP42357 657 aa10.96□□□□□ -0.65
LIG3-204ENST00000585740 IL12RB1P42701 662 aa10.96□□□□□ -0.65
LIG3-204ENST00000585740 HNRNPFP52597 415 aaKnown RBP10.96□□□□□ -0.65
LIG3-204ENST00000585740 PFN3P60673 137 aa10.96□□□□□ -0.65
LIG3-204ENST00000585740 IRF8Q02556 426 aa10.96□□□□□ -0.65
LIG3-204ENST00000585740 ABRQ12979 859 aa10.96□□□□□ -0.65
LIG3-204ENST00000585740 CHIT1Q13231 466 aa10.96□□□□□ -0.65
LIG3-204ENST00000585740 BLMHQ13867 455 aa10.96□□□□□ -0.65
LIG3-204ENST00000585740 ITPRIPL2Q3MIP1 535 aa10.96□□□□□ -0.65
LIG3-204ENST00000585740 RFTN2Q52LD8 501 aaPredicted RBP10.96□□□□□ -0.65
LIG3-204ENST00000585740 PAGE3Q5JUK9 113 aa10.96□□□□□ -0.65
LIG3-204ENST00000585740 C6orf10Q5SRN2 563 aa10.96□□□□□ -0.65
LIG3-204ENST00000585740 ZNF648Q5T619 568 aaPredicted RBP10.96□□□□□ -0.65
LIG3-204ENST00000585740 C10orf62Q5T681 223 aaPredicted RBP10.96□□□□□ -0.65
LIG3-204ENST00000585740 LPCAT4Q643R3 524 aa10.96□□□□□ -0.65
LIG3-204ENST00000585740 NEK5Q6P3R8 708 aa10.96□□□□□ -0.65
LIG3-204ENST00000585740 SYCE2Q6PIF2 218 aa10.96□□□□□ -0.65
LIG3-204ENST00000585740 AGTRAPQ6RW13 159 aa10.96□□□□□ -0.65
LIG3-204ENST00000585740 ADAMTSL4Q6UY14 1074 aa10.96□□□□□ -0.65
LIG3-204ENST00000585740 MSANTD1Q6ZTZ1 278 aa10.96□□□□□ -0.65
LIG3-204ENST00000585740 PTRH1Q86Y79 214 aaKnown RBP10.96□□□□□ -0.65
LIG3-204ENST00000585740 MMAAQ8IVH4 418 aaKnown RBP10.96□□□□□ -0.65
LIG3-204ENST00000585740 KBTBD2Q8IY47 623 aa10.96□□□□□ -0.65
LIG3-204ENST00000585740 AADATQ8N5Z0 425 aa10.96□□□□□ -0.65
LIG3-204ENST00000585740 BEND7Q8N7W2 519 aaPredicted RBP10.96□□□□□ -0.65
LIG3-204ENST00000585740 FAM156AQ8NDB6 213 aa10.96□□□□□ -0.65
LIG3-204ENST00000585740 TNIP2Q8NFZ5 429 aa10.96□□□□□ -0.65
LIG3-204ENST00000585740 OR8J3Q8NGG0 315 aa10.96□□□□□ -0.65
LIG3-204ENST00000585740 OR56A3Q8NH54 315 aa10.96□□□□□ -0.65
LIG3-204ENST00000585740 HM13Q8TCT9 377 aa10.96□□□□□ -0.65
LIG3-204ENST00000585740 HLA-CQ95604 372 aa10.96□□□□□ -0.65
LIG3-204ENST00000585740 VPS33AQ96AX1 596 aa10.96□□□□□ -0.65
LIG3-204ENST00000585740 TEX37Q96LM6 180 aa10.96□□□□□ -0.65
LIG3-204ENST00000585740 SH3GL1Q99961 368 aa10.96□□□□□ -0.65
LIG3-204ENST00000585740 PCDHAC1Q9H158 963 aa10.96□□□□□ -0.65
LIG3-204ENST00000585740 DPEP2Q9H4A9 486 aa10.96□□□□□ -0.65
LIG3-204ENST00000585740 COPS7BQ9H9Q2 264 aaPredicted RBP10.96□□□□□ -0.65
LIG3-204ENST00000585740 PRSS16Q9NQE7 514 aa10.96□□□□□ -0.65
LIG3-204ENST00000585740 ARMC1Q9NVT9 282 aa10.96□□□□□ -0.65
LIG3-204ENST00000585740 STOX2Q9P2F5 926 aaPredicted RBP10.96□□□□□ -0.65
LIG3-204ENST00000585740 MBD1Q9UIS9 605 aaPredicted RBP10.96□□□□□ -0.65
LIG3-204ENST00000585740 RIMS3Q9UJD0 308 aa10.96□□□□□ -0.65
LIG3-204ENST00000585740 SLC22A14Q9Y267 594 aa10.96□□□□□ -0.65
LIG3-204ENST00000585740 FADS3Q9Y5Q0 445 aa10.96□□□□□ -0.65
LIG3-204ENST00000585740 SNX13Q9Y5W8 968 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms