RNA–Protein interactions for RNA: ENST00000583948.5

NUP85-224, Transcript of nucleoporin 85, humanhuman

TSL 2

Gene NUP85, Length 1,197 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-224ENST00000583948 CSNK1DP48730 415 aa11.13□□□□□ -0.63
NUP85-224ENST00000583948 NPY2RP49146 381 aa11.13□□□□□ -0.63
NUP85-224ENST00000583948 POLR2LP62875 67 aaKnown RBP11.13□□□□□ -0.63
NUP85-224ENST00000583948 ABRQ12979 859 aa11.13□□□□□ -0.63
NUP85-224ENST00000583948 KLHL38Q2WGJ6 581 aa11.13□□□□□ -0.63
NUP85-224ENST00000583948 TTMPQ5BVD1 217 aa11.13□□□□□ -0.63
NUP85-224ENST00000583948 VWA5B1Q5TIE3 1220 aa11.13□□□□□ -0.63
NUP85-224ENST00000583948 UNC5AQ6ZN44 842 aa11.13□□□□□ -0.63
NUP85-224ENST00000583948 PRSS42Q7Z5A4 293 aa11.13□□□□□ -0.63
NUP85-224ENST00000583948 CDH24Q86UP0 819 aa11.13□□□□□ -0.63
NUP85-224ENST00000583948 TMEM126BQ8IUX1 230 aa11.13□□□□□ -0.63
NUP85-224ENST00000583948 PARP9Q8IXQ6 854 aa11.13□□□□□ -0.63
NUP85-224ENST00000583948 NXPE1Q8N323 547 aa11.13□□□□□ -0.63
NUP85-224ENST00000583948 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.13□□□□□ -0.63
NUP85-224ENST00000583948 ROPN1BQ9BZX4 212 aaPredicted RBP11.13□□□□□ -0.63
NUP85-224ENST00000583948 STN1Q9H668 368 aaKnown RBP11.13□□□□□ -0.63
NUP85-224ENST00000583948 ROPN1Q9HAT0 212 aaPredicted RBP11.13□□□□□ -0.63
NUP85-224ENST00000583948 PDE7BQ9NP56 450 aa11.13□□□□□ -0.63
NUP85-224ENST00000583948 FGF21Q9NSA1 209 aa11.13□□□□□ -0.63
NUP85-224ENST00000583948 DOCK10Q96BY6 2186 aa11.13□□□□□ -0.63
NUP85-224ENST00000583948 PRRC2AP48634 2157 aaKnown RBP11.12□□□□□ -0.63
NUP85-224ENST00000583948 TCRBV9S1A1TA0A576 114 aa11.12□□□□□ -0.63
NUP85-224ENST00000583948 VIPP01282 170 aa11.12□□□□□ -0.63
NUP85-224ENST00000583948 ZNF8P17098 575 aaPredicted RBP11.12□□□□□ -0.63
NUP85-224ENST00000583948 ITGA3P26006 1051 aa11.12□□□□□ -0.63
NUP85-224ENST00000583948 KIR3DL1P43629 444 aa11.12□□□□□ -0.63
NUP85-224ENST00000583948 PER3P56645 1201 aa11.12□□□□□ -0.63
NUP85-224ENST00000583948 DPTQ07507 201 aa11.12□□□□□ -0.63
NUP85-224ENST00000583948 CBLBQ13191 982 aa11.12□□□□□ -0.63
NUP85-224ENST00000583948 PEX6Q13608 980 aa11.12□□□□□ -0.63
NUP85-224ENST00000583948 LRP8Q14114 963 aa11.12□□□□□ -0.63
NUP85-224ENST00000583948 POU6F1Q14863 301 aa11.12□□□□□ -0.63
NUP85-224ENST00000583948 TMED2Q15363 201 aa11.12□□□□□ -0.63
NUP85-224ENST00000583948 AGBL2Q5U5Z8 902 aa11.12□□□□□ -0.63
NUP85-224ENST00000583948 LYPLAL1Q5VWZ2 237 aa11.12□□□□□ -0.63
NUP85-224ENST00000583948 ALG1LQ6GMV1 187 aa11.12□□□□□ -0.63
NUP85-224ENST00000583948 FAM198BQ6UWH4 519 aa11.12□□□□□ -0.63
NUP85-224ENST00000583948 CES3Q6UWW8 571 aa11.12□□□□□ -0.63
NUP85-224ENST00000583948 Q6ZS92 163 aa11.12□□□□□ -0.63
NUP85-224ENST00000583948 PPHLN1Q8NEY8 458 aaKnown RBP11.12□□□□□ -0.63
NUP85-224ENST00000583948 GPR150Q8NGU9 434 aa11.12□□□□□ -0.63
NUP85-224ENST00000583948 GSDMBQ8TAX9 411 aa11.12□□□□□ -0.63
NUP85-224ENST00000583948 ZNF669Q96BR6 464 aaPredicted RBP11.12□□□□□ -0.63
NUP85-224ENST00000583948 SGSM3Q96HU1 749 aa11.12□□□□□ -0.63
NUP85-224ENST00000583948 ATP6V1G3Q96LB4 118 aa11.12□□□□□ -0.63
NUP85-224ENST00000583948 TRAPPC9Q96Q05 1148 aa11.12□□□□□ -0.63
NUP85-224ENST00000583948 NUDCD1Q96RS6 583 aa11.12□□□□□ -0.63
NUP85-224ENST00000583948 NRTNQ99748 197 aa11.12□□□□□ -0.63
NUP85-224ENST00000583948 NAT9Q9BTE0 207 aa11.12□□□□□ -0.63
NUP85-224ENST00000583948 TMEM109Q9BVC6 243 aa11.12□□□□□ -0.63
NUP85-224ENST00000583948 IL22Q9GZX6 179 aa11.12□□□□□ -0.63
NUP85-224ENST00000583948 WASH6PQ9NQA3 447 aa11.12□□□□□ -0.63
NUP85-224ENST00000583948 VPS18Q9P253 973 aa11.12□□□□□ -0.63
NUP85-224ENST00000583948 ATXN10Q9UBB4 475 aa11.12□□□□□ -0.63
NUP85-224ENST00000583948 CTNNAL1Q9UBT7 734 aa11.12□□□□□ -0.63
NUP85-224ENST00000583948 PHTF1Q9UMS5 762 aa11.12□□□□□ -0.63
NUP85-224ENST00000583948 NOVA2Q9UNW9 492 aaKnown RBP11.12□□□□□ -0.63
NUP85-224ENST00000583948 CNTRLQ7Z7A1 2325 aa11.12□□□□□ -0.63
NUP85-224ENST00000583948 KIR2DS5A0A0G2JLQ3 304 aa11.11□□□□□ -0.63
NUP85-224ENST00000583948 A0A0G2JNG1 304 aa11.11□□□□□ -0.63
NUP85-224ENST00000583948 HMGB1P1B2RPK0 211 aaPredicted RBP11.11□□□□□ -0.63
NUP85-224ENST00000583948 KIR2DS3K7RE56 304 aa11.11□□□□□ -0.63
NUP85-224ENST00000583948 GRID2O43424 1007 aa11.11□□□□□ -0.63
NUP85-224ENST00000583948 LDB2O43679 373 aa11.11□□□□□ -0.63
NUP85-224ENST00000583948 MTX2O75431 263 aa11.11□□□□□ -0.63
NUP85-224ENST00000583948 PIAS1O75925 651 aa11.11□□□□□ -0.63
NUP85-224ENST00000583948 CLDN7O95471 211 aa11.11□□□□□ -0.63
NUP85-224ENST00000583948 POLBP06746 335 aa11.11□□□□□ -0.63
NUP85-224ENST00000583948 STSP08842 583 aa11.11□□□□□ -0.63
NUP85-224ENST00000583948 CES1P23141 567 aa11.11□□□□□ -0.63
NUP85-224ENST00000583948 CAPZBP47756 277 aa11.11□□□□□ -0.63
NUP85-224ENST00000583948 GALNT3Q14435 633 aa11.11□□□□□ -0.63
NUP85-224ENST00000583948 CRYMQ14894 314 aa11.11□□□□□ -0.63
NUP85-224ENST00000583948 KIR2DS5Q14953 304 aa11.11□□□□□ -0.63
NUP85-224ENST00000583948 SLC1A5Q15758 541 aa11.11□□□□□ -0.63
NUP85-224ENST00000583948 SIRPB2Q5JXA9 342 aa11.11□□□□□ -0.63
NUP85-224ENST00000583948 SPANXN3Q5MJ09 141 aa11.11□□□□□ -0.63
NUP85-224ENST00000583948 ARMC12Q5T9G4 340 aa11.11□□□□□ -0.63
NUP85-224ENST00000583948 STEAP4Q687X5 459 aa11.11□□□□□ -0.63
NUP85-224ENST00000583948 DENND5AQ6IQ26 1287 aa11.11□□□□□ -0.63
NUP85-224ENST00000583948 NCCRP1Q6ZVX7 275 aaPredicted RBP11.11□□□□□ -0.63
NUP85-224ENST00000583948 MRGPRGQ86SM5 289 aa11.11□□□□□ -0.63
NUP85-224ENST00000583948 TRIM48Q8IWZ4 208 aa11.11□□□□□ -0.63
NUP85-224ENST00000583948 CTAGE3PQ8IX95 158 aa11.11□□□□□ -0.63
NUP85-224ENST00000583948 PIH1D2Q8WWB5 315 aa11.11□□□□□ -0.63
NUP85-224ENST00000583948 NRGNQ92686 78 aa11.11□□□□□ -0.63
NUP85-224ENST00000583948 TADA1Q96BN2 335 aa11.11□□□□□ -0.63
NUP85-224ENST00000583948 CCDC120Q96HB5 630 aa11.11□□□□□ -0.63
NUP85-224ENST00000583948 SLC41A2Q96JW4 573 aa11.11□□□□□ -0.63
NUP85-224ENST00000583948 ZNF514Q96K75 400 aaPredicted RBP11.11□□□□□ -0.63
NUP85-224ENST00000583948 CYTH2Q99418 400 aa11.11□□□□□ -0.63
NUP85-224ENST00000583948 STMN4Q9H169 189 aaPredicted RBP11.11□□□□□ -0.63
NUP85-224ENST00000583948 OR2AG1Q9H205 316 aa11.11□□□□□ -0.63
NUP85-224ENST00000583948 ACSS3Q9H6R3 686 aa11.11□□□□□ -0.63
NUP85-224ENST00000583948 PPANQ9NQ55 473 aaKnown RBP11.11□□□□□ -0.63
NUP85-224ENST00000583948 SEMA3GQ9NS98 782 aa11.11□□□□□ -0.63
NUP85-224ENST00000583948 TBK1Q9UHD2 729 aa11.11□□□□□ -0.63
NUP85-224ENST00000583948 SOX13Q9UN79 622 aa11.11□□□□□ -0.63
NUP85-224ENST00000583948 WDR37Q9Y2I8 494 aa11.11□□□□□ -0.63
NUP85-224ENST00000583948 IKBKGQ9Y6K9 419 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms