RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 FBXO36Q8NEA4 188 aa19.85■□□□□ 0.77
SRSF1-206ENST00000583741 OR1L3Q8NH93 324 aa19.85■□□□□ 0.77
SRSF1-206ENST00000583741 PRR7Q8TB68 274 aa19.85■□□□□ 0.77
SRSF1-206ENST00000583741 UBLCP1Q8WVY7 318 aaPredicted RBP19.85■□□□□ 0.77
SRSF1-206ENST00000583741 PNPLA2Q96AD5 504 aa19.85■□□□□ 0.77
SRSF1-206ENST00000583741 CLIP3Q96DZ5 547 aa19.85■□□□□ 0.77
SRSF1-206ENST00000583741 C19orf60Q96EN9 201 aa19.85■□□□□ 0.77
SRSF1-206ENST00000583741 RMDN2Q96LZ7 410 aa19.85■□□□□ 0.77
SRSF1-206ENST00000583741 PCMTD2Q9NV79 361 aa19.85■□□□□ 0.77
SRSF1-206ENST00000583741 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.85■□□□□ 0.771e-7■■■□□ 14.6
SRSF1-206ENST00000583741 BFARQ9NZS9 450 aa19.85■□□□□ 0.77
SRSF1-206ENST00000583741 MAP10Q9P2G4 905 aa19.85■□□□□ 0.77
SRSF1-206ENST00000583741 POMT2Q9UKY4 750 aa19.85■□□□□ 0.77
SRSF1-206ENST00000583741 TEP1Q99973 2627 aaKnown RBP19.85■□□□□ 0.77
SRSF1-206ENST00000583741 MGAT4DA6NG13 374 aa19.84■□□□□ 0.77
SRSF1-206ENST00000583741 SLC9B1P1A6NJY1 282 aa19.84■□□□□ 0.77
SRSF1-206ENST00000583741 SDR42E2A6NKP2 422 aa19.84■□□□□ 0.77
SRSF1-206ENST00000583741 DDAH2O95865 285 aa19.84■□□□□ 0.77
SRSF1-206ENST00000583741 EPOP01588 193 aa19.84■□□□□ 0.77
SRSF1-206ENST00000583741 HLA-DPA1P20036 260 aa19.84■□□□□ 0.77
SRSF1-206ENST00000583741 MGAT1P26572 445 aa19.84■□□□□ 0.77
SRSF1-206ENST00000583741 ELK3P41970 407 aa19.84■□□□□ 0.77
SRSF1-206ENST00000583741 RAPSNQ13702 412 aa19.84■□□□□ 0.77
SRSF1-206ENST00000583741 SLC1A5Q15758 541 aa19.84■□□□□ 0.77
SRSF1-206ENST00000583741 CCDC38Q502W7 563 aa19.84■□□□□ 0.77
SRSF1-206ENST00000583741 DENND5AQ6IQ26 1287 aa19.84■□□□□ 0.77
SRSF1-206ENST00000583741 SYTL1Q8IYJ3 562 aa19.84■□□□□ 0.77
SRSF1-206ENST00000583741 AGGF1Q8N302 714 aaeCLIP19.84■□□□□ 0.77
SRSF1-206ENST00000583741 LILRA3Q8N6C8 439 aaPredicted RBP19.84■□□□□ 0.77
SRSF1-206ENST00000583741 OR2L2Q8NH16 312 aa19.84■□□□□ 0.77
SRSF1-206ENST00000583741 PYROXD1Q8WU10 500 aa19.84■□□□□ 0.77
SRSF1-206ENST00000583741 ZFPM2Q8WW38 1151 aa19.84■□□□□ 0.77
SRSF1-206ENST00000583741 TCTN2Q96GX1 697 aa19.84■□□□□ 0.77
SRSF1-206ENST00000583741 SIGLEC10Q96LC7 697 aa19.84■□□□□ 0.77
SRSF1-206ENST00000583741 ARNT2Q9HBZ2 717 aa19.84■□□□□ 0.77
SRSF1-206ENST00000583741 GPR83Q9NYM4 423 aa19.84■□□□□ 0.77
SRSF1-206ENST00000583741 HACD3Q9P035 362 aa19.84■□□□□ 0.77
SRSF1-206ENST00000583741 CCDC88CQ9P219 2028 aa19.84■□□□□ 0.77
SRSF1-206ENST00000583741 ERRFI1Q9UJM3 462 aaPredicted RBP19.84■□□□□ 0.77
SRSF1-206ENST00000583741 CHMP2BQ9UQN3 213 aa19.84■□□□□ 0.77
SRSF1-206ENST00000583741 TEX264Q9Y6I9 313 aa19.84■□□□□ 0.77
SRSF1-206ENST00000583741 PRAMEF1O95521 474 aa19.83■□□□□ 0.76
SRSF1-206ENST00000583741 CLDN1O95832 211 aa19.83■□□□□ 0.76
SRSF1-206ENST00000583741 SLC35G4P0C7Q5 338 aa19.83■□□□□ 0.76
SRSF1-206ENST00000583741 MSH3P20585 1137 aa19.83■□□□□ 0.76
SRSF1-206ENST00000583741 HSD17B3P37058 310 aa19.83■□□□□ 0.76
SRSF1-206ENST00000583741 NPY2RP49146 381 aa19.83■□□□□ 0.76
SRSF1-206ENST00000583741 ATP1A4Q13733 1029 aa19.83■□□□□ 0.76
SRSF1-206ENST00000583741 KYNUQ16719 465 aa19.83■□□□□ 0.76
SRSF1-206ENST00000583741 PTCHD3Q3KNS1 767 aa19.83■□□□□ 0.76
SRSF1-206ENST00000583741 OR4E2Q8NGC2 313 aa19.83■□□□□ 0.76
SRSF1-206ENST00000583741 SMAD5Q99717 465 aaKnown RBP19.83■□□□□ 0.76
SRSF1-206ENST00000583741 NRTNQ99748 197 aa19.83■□□□□ 0.76
SRSF1-206ENST00000583741 WDR83Q9BRX9 315 aaKnown RBP19.83■□□□□ 0.76
SRSF1-206ENST00000583741 SLC29A3Q9BZD2 475 aa19.83■□□□□ 0.76
SRSF1-206ENST00000583741 FANCEQ9HB96 536 aa19.83■□□□□ 0.76
SRSF1-206ENST00000583741 NINJ2Q9NZG7 142 aa19.83■□□□□ 0.76
SRSF1-206ENST00000583741 ACSL5Q9ULC5 683 aa19.83■□□□□ 0.76
SRSF1-206ENST00000583741 PKP3Q9Y446 797 aa19.83■□□□□ 0.76
SRSF1-206ENST00000583741 MAD1L1Q9Y6D9 718 aa19.83■□□□□ 0.76
SRSF1-206ENST00000583741 TMEM150CB9EJG8 249 aa19.82■□□□□ 0.76
SRSF1-206ENST00000583741 SGTAO43765 313 aa19.82■□□□□ 0.76
SRSF1-206ENST00000583741 CDH3P22223 829 aa19.82■□□□□ 0.76
SRSF1-206ENST00000583741 CASP8Q14790 479 aa19.82■□□□□ 0.76
SRSF1-206ENST00000583741 UAP1Q16222 522 aaPredicted RBP19.82■□□□□ 0.76
SRSF1-206ENST00000583741 CASC4Q6P4E1 433 aa19.82■□□□□ 0.76
SRSF1-206ENST00000583741 MED25Q71SY5 747 aa19.82■□□□□ 0.76
SRSF1-206ENST00000583741 MAMDC2Q7Z304 686 aaPredicted RBP19.82■□□□□ 0.76
SRSF1-206ENST00000583741 HDXQ7Z353 690 aa19.82■□□□□ 0.76
SRSF1-206ENST00000583741 MPP5Q8N3R9 675 aa19.82■□□□□ 0.76
SRSF1-206ENST00000583741 TMEM102Q8N9M5 508 aaPredicted RBP19.82■□□□□ 0.76
SRSF1-206ENST00000583741 ZNF398Q8TD17 642 aa19.82■□□□□ 0.76
SRSF1-206ENST00000583741 IL22Q9GZX6 179 aa19.82■□□□□ 0.76
SRSF1-206ENST00000583741 ACTR5Q9H9F9 607 aaPredicted RBP19.82■□□□□ 0.76
SRSF1-206ENST00000583741 C1GALT1Q9NS00 363 aa19.82■□□□□ 0.76
SRSF1-206ENST00000583741 SYBUQ9NX95 663 aa19.82■□□□□ 0.76
SRSF1-206ENST00000583741 SAMD15Q9P1V8 674 aa19.82■□□□□ 0.76
SRSF1-206ENST00000583741 G3BP2Q9UN86 482 aaKnown RBP19.82■□□□□ 0.76
SRSF1-206ENST00000583741 WIPF3A6NGB9 483 aa19.81■□□□□ 0.76
SRSF1-206ENST00000583741 RIPK2O43353 540 aa19.81■□□□□ 0.76
SRSF1-206ENST00000583741 ACSL3O95573 720 aa19.81■□□□□ 0.76
SRSF1-206ENST00000583741 TTC4O95801 387 aa19.81■□□□□ 0.76
SRSF1-206ENST00000583741 POLBP06746 335 aa19.81■□□□□ 0.76
SRSF1-206ENST00000583741 TPH1P17752 444 aa19.81■□□□□ 0.76
SRSF1-206ENST00000583741 CRADDP78560 199 aa19.81■□□□□ 0.76
SRSF1-206ENST00000583741 NCF4Q15080 339 aa19.81■□□□□ 0.76
SRSF1-206ENST00000583741 HPS6Q86YV9 775 aa19.81■□□□□ 0.76
SRSF1-206ENST00000583741 IGDCC3Q8IVU1 814 aa19.81■□□□□ 0.76
SRSF1-206ENST00000583741 EBNA1BP2Q99848 306 aaKnown RBP19.81■□□□□ 0.76
SRSF1-206ENST00000583741 ZC3H7BQ9UGR2 993 aaKnown RBP19.81■□□□□ 0.76
SRSF1-206ENST00000583741 ARL5AQ9Y689 179 aa19.81■□□□□ 0.76
SRSF1-206ENST00000583741 LDLRP01130 860 aa19.8■□□□□ 0.76
SRSF1-206ENST00000583741 ST6GAL1P15907 406 aa19.8■□□□□ 0.76
SRSF1-206ENST00000583741 CYP2A7P20853 494 aa19.8■□□□□ 0.76
SRSF1-206ENST00000583741 DCTP40126 519 aa19.8■□□□□ 0.76
SRSF1-206ENST00000583741 PREPP48147 710 aa19.8■□□□□ 0.76
SRSF1-206ENST00000583741 PRKAA1Q13131 559 aa19.8■□□□□ 0.76
SRSF1-206ENST00000583741 NR6A1Q15406 480 aa19.8■□□□□ 0.76
SRSF1-206ENST00000583741 PLEKHN1Q494U1 663 aaPredicted RBP19.8■□□□□ 0.76
SRSF1-206ENST00000583741 BCL7AQ4VC05 210 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms