RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 FOXA1P55317 472 aa9.05□□□□□ -0.96
SS18-220ENST00000582092 ERVPABLB-1P60509 514 aa9.05□□□□□ -0.96
SS18-220ENST00000582092 ERVK-8P63133 956 aa9.05□□□□□ -0.96
SS18-220ENST00000582092 CREB5Q02930 508 aa9.05□□□□□ -0.96
SS18-220ENST00000582092 DMWDQ09019 674 aa9.05□□□□□ -0.96
SS18-220ENST00000582092 ENPP2Q13822 863 aa9.05□□□□□ -0.96
SS18-220ENST00000582092 KRT33BQ14525 404 aa9.05□□□□□ -0.96
SS18-220ENST00000582092 GBX1Q14549 363 aa9.05□□□□□ -0.96
SS18-220ENST00000582092 LPAL2Q16609 132 aa9.05□□□□□ -0.96
SS18-220ENST00000582092 TRMT5Q32P41 509 aaKnown RBP9.05□□□□□ -0.96
SS18-220ENST00000582092 KHDC1Q4VXA5 237 aaKnown RBP9.05□□□□□ -0.96
SS18-220ENST00000582092 KIAA1324Q6UXG2 1013 aaKnown RBP9.05□□□□□ -0.96
SS18-220ENST00000582092 BNC2Q6ZN30 1099 aaPredicted RBP9.05□□□□□ -0.96
SS18-220ENST00000582092 GK5Q6ZS86 529 aa9.05□□□□□ -0.96
SS18-220ENST00000582092 CHSY3Q70JA7 882 aa9.05□□□□□ -0.96
SS18-220ENST00000582092 ADGRG6Q86SQ4 1221 aa9.05□□□□□ -0.96
SS18-220ENST00000582092 HEATR4Q86WZ0 1026 aa9.05□□□□□ -0.96
SS18-220ENST00000582092 ULK2Q8IYT8 1036 aa9.05□□□□□ -0.96
SS18-220ENST00000582092 SLC22A15Q8IZD6 547 aa9.05□□□□□ -0.96
SS18-220ENST00000582092 FAM9CQ8IZT9 166 aa9.05□□□□□ -0.96
SS18-220ENST00000582092 DSELQ8IZU8 1212 aa9.05□□□□□ -0.96
SS18-220ENST00000582092 PELI3Q8N2H9 469 aa9.05□□□□□ -0.96
SS18-220ENST00000582092 FAM160A2Q8N612 972 aaPredicted RBP9.05□□□□□ -0.96
SS18-220ENST00000582092 OR52B6Q8NGF0 335 aa9.05□□□□□ -0.96
SS18-220ENST00000582092 FBXL8Q96CD0 374 aa9.05□□□□□ -0.96
SS18-220ENST00000582092 RCN3Q96D15 328 aa9.05□□□□□ -0.96
SS18-220ENST00000582092 ZC3H10Q96K80 434 aaKnown RBP9.05□□□□□ -0.96
SS18-220ENST00000582092 CDK15Q96Q40 435 aa9.05□□□□□ -0.96
SS18-220ENST00000582092 NTMT1Q9BV86 223 aa9.05□□□□□ -0.96
SS18-220ENST00000582092 WDR26Q9H7D7 661 aa9.05□□□□□ -0.96
SS18-220ENST00000582092 DCLRE1BQ9H816 532 aa9.05□□□□□ -0.96
SS18-220ENST00000582092 TNFRSF12AQ9NP84 129 aa9.05□□□□□ -0.96
SS18-220ENST00000582092 C2orf42Q9NWW7 574 aa9.05□□□□□ -0.96
SS18-220ENST00000582092 ADA2Q9NZK5 511 aa9.05□□□□□ -0.96
SS18-220ENST00000582092 ATXN10Q9UBB4 475 aa9.05□□□□□ -0.96
SS18-220ENST00000582092 TRPS1Q9UHF7 1281 aa9.05□□□□□ -0.96
SS18-220ENST00000582092 ZNF490Q9ULM2 529 aaPredicted RBP9.05□□□□□ -0.96
SS18-220ENST00000582092 PRPF19Q9UMS4 504 aaKnown RBP9.05□□□□□ -0.96
SS18-220ENST00000582092 TMEM98Q9Y2Y6 226 aa9.05□□□□□ -0.96
SS18-220ENST00000582092 DYRK1BQ9Y463 629 aa9.05□□□□□ -0.96
SS18-220ENST00000582092 PCDHGA5Q9Y5G8 931 aa9.05□□□□□ -0.96
SS18-220ENST00000582092 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.05□□□□□ -0.96
SS18-220ENST00000582092 TCRBV21S2A2A0A5A6 115 aa9.04□□□□□ -0.96
SS18-220ENST00000582092 SLC5A10A0PJK1 596 aa9.04□□□□□ -0.96
SS18-220ENST00000582092 LRRC72A6NJI9 287 aa9.04□□□□□ -0.96
SS18-220ENST00000582092 ZNF839A8K0R7 811 aa9.04□□□□□ -0.96
SS18-220ENST00000582092 CACNB4O00305 520 aaPredicted RBP9.04□□□□□ -0.96
SS18-220ENST00000582092 NR5A2O00482 541 aa9.04□□□□□ -0.96
SS18-220ENST00000582092 OR7A17O14581 309 aa9.04□□□□□ -0.96
SS18-220ENST00000582092 MRASO14807 208 aa9.04□□□□□ -0.96
SS18-220ENST00000582092 CHUKO15111 745 aa9.04□□□□□ -0.96
SS18-220ENST00000582092 NRP2O60462 931 aa9.04□□□□□ -0.96
SS18-220ENST00000582092 RNGTTO60942 597 aaKnown RBP9.04□□□□□ -0.96
SS18-220ENST00000582092 SEC22BO75396 215 aa9.04□□□□□ -0.96
SS18-220ENST00000582092 PSIP1O75475 530 aaKnown RBP9.04□□□□□ -0.96
SS18-220ENST00000582092 MYO1DO94832 1006 aa9.04□□□□□ -0.96
SS18-220ENST00000582092 MATN4O95460 622 aa9.04□□□□□ -0.96
SS18-220ENST00000582092 PAK4O96013 591 aaPredicted RBP9.04□□□□□ -0.96
SS18-220ENST00000582092 ZNF8P17098 575 aaPredicted RBP9.04□□□□□ -0.96
SS18-220ENST00000582092 ITPKAP23677 461 aa9.04□□□□□ -0.96
SS18-220ENST00000582092 PRDX3P30048 256 aaKnown RBP9.04□□□□□ -0.96
SS18-220ENST00000582092 DRD3P35462 400 aa9.04□□□□□ -0.96
SS18-220ENST00000582092 GNPDA1P46926 289 aa9.04□□□□□ -0.96
SS18-220ENST00000582092 ID4P47928 161 aa9.04□□□□□ -0.96
SS18-220ENST00000582092 ACADVLP49748 655 aa9.04□□□□□ -0.96
SS18-220ENST00000582092 NME5P56597 212 aa9.04□□□□□ -0.96
SS18-220ENST00000582092 AP2B1P63010 937 aa9.04□□□□□ -0.96
SS18-220ENST00000582092 IRF8Q02556 426 aa9.04□□□□□ -0.96
SS18-220ENST00000582092 SPEM2Q0P670 501 aa9.04□□□□□ -0.96
SS18-220ENST00000582092 GRIK2Q13002 908 aa9.04□□□□□ -0.96
SS18-220ENST00000582092 RPA4Q13156 261 aa9.04□□□□□ -0.96
SS18-220ENST00000582092 NAE1Q13564 534 aa9.04□□□□□ -0.96
SS18-220ENST00000582092 HIST2H2ACQ16777 129 aaPredicted RBP9.04□□□□□ -0.96
SS18-220ENST00000582092 AP5B1Q2VPB7 878 aa9.04□□□□□ -0.96
SS18-220ENST00000582092 PTCHD3Q3KNS1 767 aa9.04□□□□□ -0.96
SS18-220ENST00000582092 PLA2G4EQ3MJ16 856 aa9.04□□□□□ -0.96
SS18-220ENST00000582092 XKR6Q5GH73 641 aa9.04□□□□□ -0.96
SS18-220ENST00000582092 THEMIS2Q5TEJ8 643 aa9.04□□□□□ -0.96
SS18-220ENST00000582092 AGBL4Q5VU57 503 aa9.04□□□□□ -0.96
SS18-220ENST00000582092 HIST2H2AA3Q6FI13 130 aa9.04□□□□□ -0.96
SS18-220ENST00000582092 CAPN13Q6MZZ7 669 aaPredicted RBP9.04□□□□□ -0.96
SS18-220ENST00000582092 LETMD1Q6P1Q0 360 aa9.04□□□□□ -0.96
SS18-220ENST00000582092 NEK5Q6P3R8 708 aa9.04□□□□□ -0.96
SS18-220ENST00000582092 AGTRAPQ6RW13 159 aa9.04□□□□□ -0.96
SS18-220ENST00000582092 SLC36A4Q6YBV0 504 aa9.04□□□□□ -0.96
SS18-220ENST00000582092 MBOAT1Q6ZNC8 495 aa9.04□□□□□ -0.96
SS18-220ENST00000582092 PACS2Q86VP3 889 aa9.04□□□□□ -0.96
SS18-220ENST00000582092 VRK3Q8IV63 474 aa9.04□□□□□ -0.96
SS18-220ENST00000582092 SYTL1Q8IYJ3 562 aa9.04□□□□□ -0.96
SS18-220ENST00000582092 PGAM4Q8N0Y7 254 aa9.04□□□□□ -0.96
SS18-220ENST00000582092 FBXW8Q8N3Y1 598 aa9.04□□□□□ -0.96
SS18-220ENST00000582092 AADATQ8N5Z0 425 aa9.04□□□□□ -0.96
SS18-220ENST00000582092 DCBLD1Q8N8Z6 715 aa9.04□□□□□ -0.96
SS18-220ENST00000582092 OR2L2Q8NH16 312 aa9.04□□□□□ -0.96
SS18-220ENST00000582092 HMGB4Q8WW32 186 aa9.04□□□□□ -0.96
SS18-220ENST00000582092 SELENOMQ8WWX9 145 aa9.04□□□□□ -0.96
SS18-220ENST00000582092 DLG3Q92796 817 aa9.04□□□□□ -0.96
SS18-220ENST00000582092 KLK6Q92876 244 aa9.04□□□□□ -0.96
SS18-220ENST00000582092 SH3KBP1Q96B97 665 aa9.04□□□□□ -0.96
SS18-220ENST00000582092 REPS1Q96D71 796 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms