RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 ZBTB14O43829 449 aa15.05■□□□□ -0
SS18-216ENST00000580751 CCDC166P0CW27 439 aa15.05■□□□□ -0
SS18-216ENST00000580751 CHN1P15882 459 aa15.05■□□□□ -0
SS18-216ENST00000580751 MAP4P27816 1152 aaKnown RBP15.05■□□□□ -0
SS18-216ENST00000580751 MDH1P40925 334 aaKnown RBP15.05■□□□□ -0
SS18-216ENST00000580751 BDKRB1P46663 353 aa15.05■□□□□ -0
SS18-216ENST00000580751 RAB28P51157 221 aa15.05■□□□□ -0
SS18-216ENST00000580751 PRKAA2P54646 552 aa15.05■□□□□ -0
SS18-216ENST00000580751 MPP2Q14168 576 aa15.05■□□□□ -0
SS18-216ENST00000580751 ZNF460Q14592 562 aa15.05■□□□□ -0
SS18-216ENST00000580751 CDCP2Q5VXM1 449 aa15.05■□□□□ -0
SS18-216ENST00000580751 NKAIN2Q5VXU1 208 aa15.05■□□□□ -0
SS18-216ENST00000580751 WDR74Q6RFH5 385 aaPredicted RBP15.05■□□□□ -0
SS18-216ENST00000580751 CYHR1Q6ZMK1 362 aa15.05■□□□□ -0
SS18-216ENST00000580751 AMIGO1Q86WK6 493 aa15.05■□□□□ -0
SS18-216ENST00000580751 PLXDC1Q8IUK5 500 aa15.05■□□□□ -0
SS18-216ENST00000580751 TRIM42Q8IWZ5 723 aa15.05■□□□□ -0
SS18-216ENST00000580751 CACTIN-AS1Q8N1I8 211 aa15.05■□□□□ -0
SS18-216ENST00000580751 FBXO15Q8NCQ5 510 aaPredicted RBP15.05■□□□□ -0
SS18-216ENST00000580751 JPH3Q8WXH2 748 aaPredicted RBP15.05■□□□□ -0
SS18-216ENST00000580751 GPR78Q96P69 363 aa15.05■□□□□ -0
SS18-216ENST00000580751 DEPDC7Q96QD5 511 aa15.05■□□□□ -0
SS18-216ENST00000580751 MRPL46Q9H2W6 279 aaKnown RBP15.05■□□□□ -0
SS18-216ENST00000580751 CCDC134Q9H6E4 229 aa15.05■□□□□ -0
SS18-216ENST00000580751 RDH14Q9HBH5 336 aa15.05■□□□□ -0
SS18-216ENST00000580751 IGSF5Q9NSI5 407 aa15.05■□□□□ -0
SS18-216ENST00000580751 ATXN7L1Q9ULK2 861 aaPredicted RBP15.05■□□□□ -0
SS18-216ENST00000580751 TMCO1Q9UM00 188 aa15.05■□□□□ -0
SS18-216ENST00000580751 ICKQ9UPZ9 632 aa15.05■□□□□ -0
SS18-216ENST00000580751 CLCA2Q9UQC9 943 aa15.05■□□□□ -0
SS18-216ENST00000580751 MN1Q10571 1320 aaPredicted RBP15.04■□□□□ -0
SS18-216ENST00000580751 PABPN1LA6NDY0 278 aaKnown RBP15.04■□□□□ -0
SS18-216ENST00000580751 OR5K3A6NET4 321 aa15.04■□□□□ -0
SS18-216ENST00000580751 SRRM3A6NNA2 597 aaPredicted RBP15.04■□□□□ -0
SS18-216ENST00000580751 TMX2-CTNND1H3BSU7 103 aa15.04■□□□□ -0
SS18-216ENST00000580751 GFYI3L273 518 aa15.04■□□□□ -0
SS18-216ENST00000580751 PLIN3O60664 434 aa15.04■□□□□ -0
SS18-216ENST00000580751 MT-CO3P00414 261 aa15.04■□□□□ -0
SS18-216ENST00000580751 TYRP1P17643 537 aa15.04■□□□□ -0
SS18-216ENST00000580751 CYP2A7P20853 494 aa15.04■□□□□ -0
SS18-216ENST00000580751 CSF2RBP32927 897 aa15.04■□□□□ -0
SS18-216ENST00000580751 PGGT1BP53609 377 aa15.04■□□□□ -0
SS18-216ENST00000580751 PRKAA1Q13131 559 aa15.04■□□□□ -0
SS18-216ENST00000580751 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.04■□□□□ -0
SS18-216ENST00000580751 HHATQ5VTY9 493 aa15.04■□□□□ -0
SS18-216ENST00000580751 ARMC6Q6NXE6 501 aa15.04■□□□□ -0
SS18-216ENST00000580751 TMEM71Q6P5X7 295 aa15.04■□□□□ -0
SS18-216ENST00000580751 TMEM207Q6UWW9 146 aa15.04■□□□□ -0
SS18-216ENST00000580751 CDHR3Q6ZTQ4 885 aa15.04■□□□□ -0
SS18-216ENST00000580751 USP53Q70EK8 1073 aa15.04■□□□□ -0
SS18-216ENST00000580751 UBE2R2Q712K3 238 aaPredicted RBP15.04■□□□□ -0
SS18-216ENST00000580751 TMPRSS7Q7RTY8 843 aa15.04■□□□□ -0
SS18-216ENST00000580751 RASGRP3Q8IV61 690 aa15.04■□□□□ -0
SS18-216ENST00000580751 DCBLD1Q8N8Z6 715 aa15.04■□□□□ -0
SS18-216ENST00000580751 OR4E2Q8NGC2 313 aa15.04■□□□□ -0
SS18-216ENST00000580751 OR4D9Q8NGE8 314 aa15.04■□□□□ -0
SS18-216ENST00000580751 RAB3IL1Q8TBN0 382 aa15.04■□□□□ -0
SS18-216ENST00000580751 STAG3L4Q8TBR4 150 aa15.04■□□□□ -0
SS18-216ENST00000580751 SREK1Q8WXA9 508 aaKnown RBP15.04■□□□□ -0
SS18-216ENST00000580751 NCSTNQ92542 709 aa15.04■□□□□ -0
SS18-216ENST00000580751 RSC1A1Q92681 617 aa15.04■□□□□ -0
SS18-216ENST00000580751 KIAA1191Q96A73 305 aa15.04■□□□□ -0
SS18-216ENST00000580751 GRAMD1AQ96CP6 724 aa15.04■□□□□ -0
SS18-216ENST00000580751 CCDC126Q96EE4 140 aa15.04■□□□□ -0
SS18-216ENST00000580751 TMEM74Q96NL1 305 aa15.04■□□□□ -0
SS18-216ENST00000580751 NUDT22Q9BRQ3 303 aa15.04■□□□□ -0
SS18-216ENST00000580751 RAB33BQ9H082 229 aa15.04■□□□□ -0
SS18-216ENST00000580751 OR6C2Q9NZP2 312 aa15.04■□□□□ -0
SS18-216ENST00000580751 SPATA7Q9P0W8 599 aa15.04■□□□□ -0
SS18-216ENST00000580751 KNTC1P50748 2209 aa15.04■□□□□ -0
SS18-216ENST00000580751 OR6C74A6NCV1 312 aa15.03■□□□□ -0
SS18-216ENST00000580751 SYCE1LA8MT33 242 aa15.03■□□□□ -0
SS18-216ENST00000580751 MYO1CO00159 1063 aa15.03■□□□□ -0
SS18-216ENST00000580751 CASC3O15234 703 aaKnown RBP15.03■□□□□ -0
SS18-216ENST00000580751 PROCP04070 461 aa15.03■□□□□ -0
SS18-216ENST00000580751 ENO2P09104 434 aaPredicted RBP15.03■□□□□ -0
SS18-216ENST00000580751 JUPP14923 745 aa15.03■□□□□ -0
SS18-216ENST00000580751 CD1DP15813 335 aa15.03■□□□□ -0
SS18-216ENST00000580751 PKLRP30613 574 aa15.03■□□□□ -0
SS18-216ENST00000580751 ASPHQ12797 758 aa15.03■□□□□ -0
SS18-216ENST00000580751 FOXC1Q12948 553 aa15.03■□□□□ -0
SS18-216ENST00000580751 CSHL1Q14406 222 aa15.03■□□□□ -0
SS18-216ENST00000580751 GRB7Q14451 532 aa15.03■□□□□ -0
SS18-216ENST00000580751 RGS9BPQ6ZS82 235 aa15.03■□□□□ -0
SS18-216ENST00000580751 ISCA2Q86U28 154 aa15.03■□□□□ -0
SS18-216ENST00000580751 PLD6Q8N2A8 252 aaKnown RBP15.03■□□□□ -0
SS18-216ENST00000580751 CHCHD4Q8N4Q1 142 aa15.03■□□□□ -0
SS18-216ENST00000580751 ANKRD42Q8N9B4 389 aa15.03■□□□□ -0
SS18-216ENST00000580751 OR9A1PQ8NGU1 263 aa15.03■□□□□ -0
SS18-216ENST00000580751 MCOLN3Q8TDD5 553 aa15.03■□□□□ -0
SS18-216ENST00000580751 KCTD4Q8WVF5 259 aa15.03■□□□□ -0
SS18-216ENST00000580751 ANKRD49Q8WVL7 239 aa15.03■□□□□ -0
SS18-216ENST00000580751 NXNL1Q96CM4 212 aa15.03■□□□□ -0
SS18-216ENST00000580751 ZDHHC12Q96GR4 267 aa15.03■□□□□ -0
SS18-216ENST00000580751 FAM111AQ96PZ2 611 aa15.03■□□□□ -0
SS18-216ENST00000580751 SLC12A9Q9BXP2 914 aa15.03■□□□□ -0
SS18-216ENST00000580751 PARVBQ9HBI1 364 aa15.03■□□□□ -0
SS18-216ENST00000580751 HRASLS2Q9NWW9 162 aa15.03■□□□□ -0
SS18-216ENST00000580751 TMEM216Q9P0N5 145 aa15.03■□□□□ -0
SS18-216ENST00000580751 EPHA6Q9UF33 1036 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms