RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.05□□□□□ -1.92
KPNB1-208ENST00000580019 TUBA8Q9NY65 449 aaPredicted RBP3.05□□□□□ -1.92
KPNB1-208ENST00000580019 SLCO1C1Q9NYB5 712 aa3.05□□□□□ -1.92
KPNB1-208ENST00000580019 TAS2R14Q9NYV8 317 aa3.05□□□□□ -1.92
KPNB1-208ENST00000580019 OR6C3Q9NZP0 311 aa3.05□□□□□ -1.92
KPNB1-208ENST00000580019 UBQLN2Q9UHD9 624 aa3.05□□□□□ -1.92
KPNB1-208ENST00000580019 DBNLQ9UJU6 430 aaKnown RBP3.05□□□□□ -1.92
KPNB1-208ENST00000580019 DNPEPQ9ULA0 475 aa3.05□□□□□ -1.92
KPNB1-208ENST00000580019 SLC8A2Q9UPR5 921 aa3.05□□□□□ -1.92
KPNB1-208ENST00000580019 ERVK-11Q9UQG0 969 aa3.05□□□□□ -1.92
KPNB1-208ENST00000580019 NUDCQ9Y266 331 aa3.05□□□□□ -1.92
KPNB1-208ENST00000580019 ASB3Q9Y575 518 aa3.05□□□□□ -1.92
KPNB1-208ENST00000580019 SIRT4Q9Y6E7 314 aaPredicted RBP3.05□□□□□ -1.92
KPNB1-208ENST00000580019 SQORQ9Y6N5 450 aa3.05□□□□□ -1.92
KPNB1-208ENST00000580019 MROH1Q8NDA8 1641 aa3.04□□□□□ -1.92
KPNB1-208ENST00000580019 GLI3P10071 1580 aa3.04□□□□□ -1.92
KPNB1-208ENST00000580019 NRKQ7Z2Y5 1582 aa3.04□□□□□ -1.92
KPNB1-208ENST00000580019 SLIT1O75093 1534 aa3.04□□□□□ -1.92
KPNB1-208ENST00000580019 MST1RQ04912 1400 aa3.04□□□□□ -1.92
KPNB1-208ENST00000580019 TCF20Q9UGU0 1960 aaKnown RBP3.04□□□□□ -1.92
KPNB1-208ENST00000580019 A0A087WZY1 265 aa3.04□□□□□ -1.92
KPNB1-208ENST00000580019 C15orf38-AP3S2A0A0A6YYH1 394 aa3.04□□□□□ -1.92
KPNB1-208ENST00000580019 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.04□□□□□ -1.92
KPNB1-208ENST00000580019 FAM230AA0A1W2PPH8 454 aa3.04□□□□□ -1.92
KPNB1-208ENST00000580019 A0A1W2PPM1 405 aa3.04□□□□□ -1.92
KPNB1-208ENST00000580019 CPED1A4D0V7 1026 aa3.04□□□□□ -1.92
KPNB1-208ENST00000580019 KBTBD13C9JR72 458 aa3.04□□□□□ -1.92
KPNB1-208ENST00000580019 PLK4O00444 970 aa3.04□□□□□ -1.92
KPNB1-208ENST00000580019 PRYO14603 147 aa3.04□□□□□ -1.92
KPNB1-208ENST00000580019 GLCEO94923 617 aa3.04□□□□□ -1.92
KPNB1-208ENST00000580019 TJP3O95049 919 aa3.04□□□□□ -1.92
KPNB1-208ENST00000580019 PCCBP05166 539 aa3.04□□□□□ -1.92
KPNB1-208ENST00000580019 PGK2P07205 417 aa3.04□□□□□ -1.92
KPNB1-208ENST00000580019 SBK2P0C263 348 aa3.04□□□□□ -1.92
KPNB1-208ENST00000580019 PLA2G4BP0C869 781 aa3.04□□□□□ -1.92
KPNB1-208ENST00000580019 SPP1P10451 314 aa3.04□□□□□ -1.92
KPNB1-208ENST00000580019 TCF4P15884 667 aa3.04□□□□□ -1.92
KPNB1-208ENST00000580019 PPP3CBP16298 524 aa3.04□□□□□ -1.92
KPNB1-208ENST00000580019 CHRNA5P30532 468 aa3.04□□□□□ -1.92
KPNB1-208ENST00000580019 HOXC9P31274 260 aa3.04□□□□□ -1.92
KPNB1-208ENST00000580019 SLC6A6P31641 620 aa3.04□□□□□ -1.92
KPNB1-208ENST00000580019 FOLR3P41439 243 aa3.04□□□□□ -1.92
KPNB1-208ENST00000580019 DHPSP49366 369 aaPredicted RBP3.04□□□□□ -1.92
KPNB1-208ENST00000580019 HTR6P50406 440 aa3.04□□□□□ -1.92
KPNB1-208ENST00000580019 HNRNPMP52272 730 aaKnown RBP eCLIP3.04□□□□□ -1.92
KPNB1-208ENST00000580019 VCPP55072 806 aaKnown RBP3.04□□□□□ -1.92
KPNB1-208ENST00000580019 ADORA2A-AS1P86434 159 aa3.04□□□□□ -1.92
KPNB1-208ENST00000580019 SPIBQ01892 262 aa3.04□□□□□ -1.92
KPNB1-208ENST00000580019 RHAGQ02094 409 aa3.04□□□□□ -1.92
KPNB1-208ENST00000580019 GCNT1Q02742 428 aa3.04□□□□□ -1.92
KPNB1-208ENST00000580019 GAD2Q05329 585 aa3.04□□□□□ -1.92
KPNB1-208ENST00000580019 PRKCZQ05513 592 aa3.04□□□□□ -1.92
KPNB1-208ENST00000580019 DMTNQ08495 405 aa3.04□□□□□ -1.92
KPNB1-208ENST00000580019 SREBF2Q12772 1141 aa3.04□□□□□ -1.92
KPNB1-208ENST00000580019 PPP1R8Q12972 351 aaKnown RBP3.04□□□□□ -1.92
KPNB1-208ENST00000580019 ABRQ12979 859 aa3.04□□□□□ -1.92
KPNB1-208ENST00000580019 GRIK3Q13003 919 aa3.04□□□□□ -1.92
KPNB1-208ENST00000580019 NAE1Q13564 534 aa3.04□□□□□ -1.92
KPNB1-208ENST00000580019 PDE7AQ13946 482 aa3.04□□□□□ -1.92
KPNB1-208ENST00000580019 SLC39A14Q15043 492 aa3.04□□□□□ -1.92
KPNB1-208ENST00000580019 CEBPEQ15744 281 aa3.04□□□□□ -1.92
KPNB1-208ENST00000580019 PNLIPRP3Q17RR3 467 aa3.04□□□□□ -1.92
KPNB1-208ENST00000580019 ANXA2RQ3ZCQ2 193 aa3.04□□□□□ -1.92
KPNB1-208ENST00000580019 FAM174BQ3ZCQ3 159 aa3.04□□□□□ -1.92
KPNB1-208ENST00000580019 FAM98BQ52LJ0 330 aaKnown RBP3.04□□□□□ -1.92
KPNB1-208ENST00000580019 CAVIN4Q5BKX8 364 aa3.04□□□□□ -1.92
KPNB1-208ENST00000580019 ARL13AQ5H913 290 aaPredicted RBP3.04□□□□□ -1.92
KPNB1-208ENST00000580019 PXDC1Q5TGL8 231 aa3.04□□□□□ -1.92
KPNB1-208ENST00000580019 LRRC38Q5VT99 294 aa3.04□□□□□ -1.92
KPNB1-208ENST00000580019 SUMO4Q6EEV6 95 aa3.04□□□□□ -1.92
KPNB1-208ENST00000580019 TXNRD3NBQ6F5E7 133 aa3.04□□□□□ -1.92
KPNB1-208ENST00000580019 CES5AQ6NT32 575 aa3.04□□□□□ -1.92
KPNB1-208ENST00000580019 NOTUMQ6P988 496 aa3.04□□□□□ -1.92
KPNB1-208ENST00000580019 TEX38Q6PEX7 206 aa3.04□□□□□ -1.92
KPNB1-208ENST00000580019 WDR88Q6ZMY6 472 aa3.04□□□□□ -1.92
KPNB1-208ENST00000580019 MACC1Q6ZN28 852 aa3.04□□□□□ -1.92
KPNB1-208ENST00000580019 C18orf65Q6ZTR6 163 aa3.04□□□□□ -1.92
KPNB1-208ENST00000580019 C1orf186Q6ZWK4 172 aa3.04□□□□□ -1.92
KPNB1-208ENST00000580019 PIGWQ7Z7B1 504 aa3.04□□□□□ -1.92
KPNB1-208ENST00000580019 VASH2Q86V25 355 aa3.04□□□□□ -1.92
KPNB1-208ENST00000580019 WDR5BQ86VZ2 330 aa3.04□□□□□ -1.92
KPNB1-208ENST00000580019 AMZ2Q86W34 360 aa3.04□□□□□ -1.92
KPNB1-208ENST00000580019 ZNF595Q8IYB9 648 aa3.04□□□□□ -1.92
KPNB1-208ENST00000580019 ZCCHC7Q8N3Z6 543 aaKnown RBP3.04□□□□□ -1.92
KPNB1-208ENST00000580019 ZNF611Q8N823 705 aa3.04□□□□□ -1.92
KPNB1-208ENST00000580019 FAM133AQ8N9E0 248 aa3.04□□□□□ -1.92
KPNB1-208ENST00000580019 EXD3Q8N9H8 876 aa3.04□□□□□ -1.92
KPNB1-208ENST00000580019 LEMD2Q8NC56 503 aa3.04□□□□□ -1.92
KPNB1-208ENST00000580019 CCDC148Q8NFR7 591 aa3.04□□□□□ -1.92
KPNB1-208ENST00000580019 BBS10Q8TAM1 723 aa3.04□□□□□ -1.92
KPNB1-208ENST00000580019 ANKRD49Q8WVL7 239 aa3.04□□□□□ -1.92
KPNB1-208ENST00000580019 RIT1Q92963 219 aa3.04□□□□□ -1.92
KPNB1-208ENST00000580019 IGSF8Q969P0 613 aa3.04□□□□□ -1.92
KPNB1-208ENST00000580019 FKBP10Q96AY3 582 aa3.04□□□□□ -1.92
KPNB1-208ENST00000580019 OTULINQ96BN8 352 aa3.04□□□□□ -1.92
KPNB1-208ENST00000580019 CDKN2AIPNLQ96HQ2 116 aa3.04□□□□□ -1.92
KPNB1-208ENST00000580019 COG3Q96JB2 828 aa3.04□□□□□ -1.92
KPNB1-208ENST00000580019 VCPIP1Q96JH7 1222 aa3.04□□□□□ -1.92
KPNB1-208ENST00000580019 PLIN2Q99541 437 aa3.04□□□□□ -1.92
KPNB1-208ENST00000580019 FEVQ99581 238 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms