RNA–Protein interactions for RNA: ENST00000579466.1

MSI2-208, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 186 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-208	ENST00000579466	ITGAX	P20702	1163 aa		9.24	□□□□□ -0.93
MSI2-208	ENST00000579466	MMP11	P24347	488 aa		9.24	□□□□□ -0.93
MSI2-208	ENST00000579466	TSFM	P43897	325 aa	Known RBP	9.24	□□□□□ -0.93
MSI2-208	ENST00000579466	OR1D4	P47884	311 aa		9.24	□□□□□ -0.93
MSI2-208	ENST00000579466	KCNK10	P57789	538 aa		9.24	□□□□□ -0.93
MSI2-208	ENST00000579466	CACNG1	Q06432	222 aa		9.24	□□□□□ -0.93
MSI2-208	ENST00000579466	MSLN	Q13421	630 aa	Predicted RBP	9.24	□□□□□ -0.93
MSI2-208	ENST00000579466	TRIM14	Q14142	442 aa		9.24	□□□□□ -0.93
MSI2-208	ENST00000579466	NKG7	Q16617	165 aa		9.24	□□□□□ -0.93
MSI2-208	ENST00000579466	TUBB8	Q3ZCM7	444 aa		9.24	□□□□□ -0.93
MSI2-208	ENST00000579466	GPR33	Q49SQ1	333 aa		9.24	□□□□□ -0.93
MSI2-208	ENST00000579466	DENND5A	Q6IQ26	1287 aa		9.24	□□□□□ -0.93
MSI2-208	ENST00000579466	ARHGEF18	Q6ZSZ5	1173 aa		9.24	□□□□□ -0.93
MSI2-208	ENST00000579466	COX15	Q7KZN9	410 aa		9.24	□□□□□ -0.93
MSI2-208	ENST00000579466	RCOR2	Q8IZ40	523 aa		9.24	□□□□□ -0.93
MSI2-208	ENST00000579466	DNAJC22	Q8N4W6	341 aa		9.24	□□□□□ -0.93
MSI2-208	ENST00000579466	CATSPER1	Q8NEC5	780 aa		9.24	□□□□□ -0.93
MSI2-208	ENST00000579466	FAR1	Q8WVX9	515 aa		9.24	□□□□□ -0.93
MSI2-208	ENST00000579466	SPSB2	Q99619	263 aa		9.24	□□□□□ -0.93
MSI2-208	ENST00000579466	BARD1	Q99728	777 aa	Known RBP	9.24	□□□□□ -0.93
MSI2-208	ENST00000579466	OLAH	Q9NV23	265 aa		9.24	□□□□□ -0.93
MSI2-208	ENST00000579466	CAMSAP3	Q9P1Y5	1249 aa	Predicted RBP	9.24	□□□□□ -0.93
MSI2-208	ENST00000579466	ENTPD4	Q9Y227	616 aa		9.24	□□□□□ -0.93
MSI2-208	ENST00000579466	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	9.24	□□□□□ -0.93
MSI2-208	ENST00000579466	OTOG	Q6ZRI0	2925 aa		9.24	□□□□□ -0.93
MSI2-208	ENST00000579466	PKDREJ	Q9NTG1	2253 aa		9.23	□□□□□ -0.93
MSI2-208	ENST00000579466	TRBV5-4	A0A0C4DH59	114 aa		9.23	□□□□□ -0.93
MSI2-208	ENST00000579466	LIN7A	O14910	233 aa	Predicted RBP	9.23	□□□□□ -0.93
MSI2-208	ENST00000579466	KLHL18	O94889	574 aa		9.23	□□□□□ -0.93
MSI2-208	ENST00000579466	FTH1	P02794	183 aa		9.23	□□□□□ -0.93
MSI2-208	ENST00000579466	ACADL	P28330	430 aa		9.23	□□□□□ -0.93
MSI2-208	ENST00000579466	GRN	P28799	593 aa	Known RBP	9.23	□□□□□ -0.93
MSI2-208	ENST00000579466	SOX8	P57073	446 aa		9.23	□□□□□ -0.93
MSI2-208	ENST00000579466		Q0VFX4	171 aa		9.23	□□□□□ -0.93
MSI2-208	ENST00000579466	TLR1	Q15399	786 aa		9.23	□□□□□ -0.93
MSI2-208	ENST00000579466	CCDC38	Q502W7	563 aa		9.23	□□□□□ -0.93
MSI2-208	ENST00000579466	AADACL2	Q6P093	401 aa		9.23	□□□□□ -0.93
MSI2-208	ENST00000579466	KIRREL2	Q6UWL6	708 aa		9.23	□□□□□ -0.93
MSI2-208	ENST00000579466	TMTC1	Q8IUR5	882 aa		9.23	□□□□□ -0.93
MSI2-208	ENST00000579466	MCAT	Q8IVS2	390 aa	Known RBP	9.23	□□□□□ -0.93
MSI2-208	ENST00000579466	TBC1D21	Q8IYX1	336 aa		9.23	□□□□□ -0.93
MSI2-208	ENST00000579466	SLC34A3	Q8N130	599 aa		9.23	□□□□□ -0.93
MSI2-208	ENST00000579466	OR1N1	Q8NGS0	311 aa		9.23	□□□□□ -0.93
MSI2-208	ENST00000579466	OR5K2	Q8NHB8	316 aa		9.23	□□□□□ -0.93
MSI2-208	ENST00000579466	DLG3	Q92796	817 aa		9.23	□□□□□ -0.93
MSI2-208	ENST00000579466	C8orf44	Q96CB5	159 aa		9.23	□□□□□ -0.93
MSI2-208	ENST00000579466	LRRC45	Q96CN5	670 aa		9.23	□□□□□ -0.93
MSI2-208	ENST00000579466	CDKN2AIPNL	Q96HQ2	116 aa		9.23	□□□□□ -0.93
MSI2-208	ENST00000579466	SPATA13	Q96N96	652 aa		9.23	□□□□□ -0.93
MSI2-208	ENST00000579466	ALS2CR12	Q96Q35	445 aa		9.23	□□□□□ -0.93
MSI2-208	ENST00000579466	CRB3	Q9BUF7	120 aa		9.23	□□□□□ -0.93
MSI2-208	ENST00000579466	LHPP	Q9H008	270 aa		9.23	□□□□□ -0.93
MSI2-208	ENST00000579466	ZNF160	Q9HCG1	818 aa		9.23	□□□□□ -0.93
MSI2-208	ENST00000579466	CUTC	Q9NTM9	273 aa		9.23	□□□□□ -0.93
MSI2-208	ENST00000579466	NLE1	Q9NVX2	485 aa	Predicted RBP	9.23	□□□□□ -0.93
MSI2-208	ENST00000579466	OR6C2	Q9NZP2	312 aa		9.23	□□□□□ -0.93
MSI2-208	ENST00000579466	STOX2	Q9P2F5	926 aa	Predicted RBP	9.23	□□□□□ -0.93
MSI2-208	ENST00000579466	COPG2	Q9UBF2	871 aa		9.23	□□□□□ -0.93
MSI2-208	ENST00000579466	POLG2	Q9UHN1	485 aa		9.23	□□□□□ -0.93
MSI2-208	ENST00000579466	PCNX1	Q96RV3	2341 aa		9.22	□□□□□ -0.93
MSI2-208	ENST00000579466	CCDC168	Q8NDH2	2452 aa		9.22	□□□□□ -0.93
MSI2-208	ENST00000579466	TRGV8	A0A0C4DH27	118 aa		9.22	□□□□□ -0.93
MSI2-208	ENST00000579466	KRT87P	A6NCN2	255 aa		9.22	□□□□□ -0.93
MSI2-208	ENST00000579466	BHMG1	C9JSJ3	638 aa	Predicted RBP	9.22	□□□□□ -0.93
MSI2-208	ENST00000579466	FFAR3	O14843	346 aa		9.22	□□□□□ -0.93
MSI2-208	ENST00000579466	DSCR3	O14972	297 aa		9.22	□□□□□ -0.93
MSI2-208	ENST00000579466	GPR42	O15529	346 aa		9.22	□□□□□ -0.93
MSI2-208	ENST00000579466	PJA2	O43164	708 aa		9.22	□□□□□ -0.93
MSI2-208	ENST00000579466	OR1I1	O60431	355 aa		9.22	□□□□□ -0.93
MSI2-208	ENST00000579466	JRK	O75564	520 aa		9.22	□□□□□ -0.93
MSI2-208	ENST00000579466	AP2A2	O94973	939 aa		9.22	□□□□□ -0.93
MSI2-208	ENST00000579466	AP2A1	O95782	977 aa		9.22	□□□□□ -0.93
MSI2-208	ENST00000579466	MSN	P26038	577 aa	Known RBP	9.22	□□□□□ -0.93
MSI2-208	ENST00000579466	PKLR	P30613	574 aa		9.22	□□□□□ -0.93
MSI2-208	ENST00000579466	NSG1	P42857	185 aa		9.22	□□□□□ -0.93
MSI2-208	ENST00000579466	MAGEA1	P43355	309 aa		9.22	□□□□□ -0.93
MSI2-208	ENST00000579466	ARSF	P54793	590 aa		9.22	□□□□□ -0.93
MSI2-208	ENST00000579466	VSX2	P58304	361 aa	Predicted RBP	9.22	□□□□□ -0.93
MSI2-208	ENST00000579466	ARG2	P78540	354 aa		9.22	□□□□□ -0.93
MSI2-208	ENST00000579466	HSPA14	Q0VDF9	509 aa		9.22	□□□□□ -0.93
MSI2-208	ENST00000579466	KIR2DS3	Q14952	304 aa		9.22	□□□□□ -0.93
MSI2-208	ENST00000579466	SLC5A12	Q1EHB4	618 aa		9.22	□□□□□ -0.93
MSI2-208	ENST00000579466	ISLR2	Q6UXK2	745 aa		9.22	□□□□□ -0.93
MSI2-208	ENST00000579466	OVCH1	Q7RTY7	1134 aa		9.22	□□□□□ -0.93
MSI2-208	ENST00000579466	VRK3	Q8IV63	474 aa		9.22	□□□□□ -0.93
MSI2-208	ENST00000579466	VSTM4	Q8IW00	320 aa		9.22	□□□□□ -0.93
MSI2-208	ENST00000579466	BCORP1	Q8N888	145 aa		9.22	□□□□□ -0.93
MSI2-208	ENST00000579466	TTC29	Q8NA56	475 aa	Predicted RBP	9.22	□□□□□ -0.93
MSI2-208	ENST00000579466	LINC01555	Q8NAE3	123 aa		9.22	□□□□□ -0.93
MSI2-208	ENST00000579466	OR11G2	Q8NGC1	345 aa		9.22	□□□□□ -0.93
MSI2-208	ENST00000579466	LKAAEAR1	Q8TD35	194 aa		9.22	□□□□□ -0.93
MSI2-208	ENST00000579466	FKBP10	Q96AY3	582 aa		9.22	□□□□□ -0.93
MSI2-208	ENST00000579466	SLX1A	Q9BQ83	275 aa		9.22	□□□□□ -0.93
MSI2-208	ENST00000579466	SELENOS	Q9BQE4	189 aa		9.22	□□□□□ -0.93
MSI2-208	ENST00000579466	OSBPL8	Q9BZF1	889 aa		9.22	□□□□□ -0.93
MSI2-208	ENST00000579466	PLA2G3	Q9NZ20	509 aa		9.22	□□□□□ -0.93
MSI2-208	ENST00000579466	PTGFRN	Q9P2B2	879 aa		9.22	□□□□□ -0.93
MSI2-208	ENST00000579466	TSR3	Q9UJK0	312 aa	Known RBP	9.22	□□□□□ -0.93
MSI2-208	ENST00000579466	ITGB1BP2	Q9UKP3	347 aa		9.22	□□□□□ -0.93
MSI2-208	ENST00000579466	CPAMD8	Q8IZJ3	1885 aa		9.21	□□□□□ -0.93

Retrieved 100 of 20,778 RNA–protein pairs in 40 ms