RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 IARS2Q9NSE4 1012 aaKnown RBP3.7□□□□□ -1.82
SMARCE1-215ENST00000578995 C20orf96Q9NUD7 363 aaPredicted RBP3.7□□□□□ -1.82
SMARCE1-215ENST00000578995 SIRT5Q9NXA8 310 aa3.7□□□□□ -1.82
SMARCE1-215ENST00000578995 OGFRQ9NZT2 677 aa3.7□□□□□ -1.82
SMARCE1-215ENST00000578995 TAAR2Q9P1P5 351 aa3.7□□□□□ -1.82
SMARCE1-215ENST00000578995 SPASTQ9UBP0 616 aa3.7□□□□□ -1.82
SMARCE1-215ENST00000578995 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.7□□□□□ -1.82
SMARCE1-215ENST00000578995 CRLS1Q9UJA2 301 aa3.7□□□□□ -1.82
SMARCE1-215ENST00000578995 FBXO5Q9UKT4 447 aa3.7□□□□□ -1.82
SMARCE1-215ENST00000578995 NOVA2Q9UNW9 492 aaKnown RBP3.7□□□□□ -1.82
SMARCE1-215ENST00000578995 KCNK6Q9Y257 313 aa3.7□□□□□ -1.82
SMARCE1-215ENST00000578995 MAD1L1Q9Y6D9 718 aa3.7□□□□□ -1.82
SMARCE1-215ENST00000578995 SLC30A1Q9Y6M5 507 aa3.7□□□□□ -1.82
SMARCE1-215ENST00000578995 V9GYY5 206 aaPredicted RBP3.7□□□□□ -1.82
SMARCE1-215ENST00000578995 IGF2RP11717 2491 aa3.7□□□□□ -1.82
SMARCE1-215ENST00000578995 MAP1BP46821 2468 aaKnown RBP3.7□□□□□ -1.82
SMARCE1-215ENST00000578995 ASPMQ8IZT6 3477 aa3.7□□□□□ -1.82
SMARCE1-215ENST00000578995 ZFHX4Q86UP3 3567 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 FREM2Q5SZK8 3169 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 DOCK10Q96BY6 2186 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 TNRC6AQ8NDV7 1962 aaKnown RBP3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 EXPH5Q8NEV8 1989 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 CPAMD8Q8IZJ3 1885 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 USP24Q9UPU5 2620 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 APC2O95996 2303 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 A0A1W2PQM1 296 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 KRT87PA6NCN2 255 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 OR52A4PA6NMU1 304 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 HRKO00198 91 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 NTN3O00634 580 aaPredicted RBP3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 NDC80O14777 642 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 KMOO15229 486 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 FFAR2O15552 330 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 RIPK2O43353 540 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 B4GAT1O43505 415 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 KCNJ13O60928 360 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 SPAG6O75602 509 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 FAM155BO75949 473 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 MATN4O95460 622 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 ASMTLO95671 621 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 TNFP01375 233 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 ESR1P03372 595 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 SHBGP04278 402 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 GSTM1P09488 218 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 ERGP11308 486 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 MTHFD1P11586 935 aaKnown RBP3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 F3P13726 295 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 PKMP14618 531 aaKnown RBP3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 XRCC1P18887 633 aaPredicted RBP3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 MSH3P20585 1137 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 ATP5DP30049 168 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 PEBP1P30086 187 aaKnown RBP3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 AKT1P31749 480 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 CSF2RBP32927 897 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 ACTR1BP42025 376 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 GRK6P43250 576 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 TNNT3P45378 269 aaPredicted RBP3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 KCNC1P48547 511 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 ARRB1P49407 418 aaPredicted RBP3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 BLKP51451 505 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 LIMK2P53671 638 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 TAS2R39P59534 338 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 ACTR1AP61163 376 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 MGAT5Q09328 741 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 DLG1Q12959 904 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 RPA4Q13156 261 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 DNAJC3Q13217 504 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 SQSTM1Q13501 440 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 BOP1Q14137 746 aaKnown RBP3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 ELOCQ15369 112 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 TCEA2Q15560 299 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 RPE65Q16518 533 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 PPP1R3AQ16821 1122 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 UAP1L1Q3KQV9 507 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 KBTBD12Q3ZCT8 623 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 CCSMST1Q4G0I0 132 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 C14orf28Q4W4Y0 310 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 FASTKD1Q53R41 847 aaKnown RBP3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 ACSBG2Q5FVE4 666 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 RPS26P11Q5JNZ5 115 aaPredicted RBP3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 AARS2Q5JTZ9 985 aaKnown RBP3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 RNF187Q5TA31 235 aaPredicted RBP3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 LYPLAL1Q5VWZ2 237 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 CDCP2Q5VXM1 449 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 MRNIPQ6NTE8 343 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 ZCCHC8Q6NZY4 707 aaKnown RBP3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 DUS1LQ6P1R4 473 aaKnown RBP3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 CASC4Q6P4E1 433 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 SLC30A9Q6PML9 568 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 NAPRTQ6XQN6 538 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 SH2D5Q6ZV89 423 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 USP51Q70EK9 711 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 CHST15Q7LFX5 561 aaPredicted RBP3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 RD3Q7Z3Z2 195 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 PDZD3Q86UT5 571 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 PIM3Q86V86 326 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 AMZ2Q86W34 360 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 SLC26A11Q86WA9 606 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 LRRC6Q86X45 466 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms