RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 ARHGAP19Q14CB8 494 aa18.02■□□□□ 0.48
PRKCA-203ENST00000578063 NXNQ6DKJ4 435 aa18.02■□□□□ 0.48
PRKCA-203ENST00000578063 CAPN13Q6MZZ7 669 aaPredicted RBP18.02■□□□□ 0.48
PRKCA-203ENST00000578063 HID1Q8IV36 788 aa18.02■□□□□ 0.48
PRKCA-203ENST00000578063 DDIASQ8IXT1 998 aa18.02■□□□□ 0.48
PRKCA-203ENST00000578063 RGL4Q8IZJ4 473 aa18.02■□□□□ 0.48
PRKCA-203ENST00000578063 PHC3Q8NDX5 983 aa18.02■□□□□ 0.48
PRKCA-203ENST00000578063 INSM2Q96T92 566 aaPredicted RBP18.02■□□□□ 0.48
PRKCA-203ENST00000578063 SLC29A3Q9BZD2 475 aa18.02■□□□□ 0.48
PRKCA-203ENST00000578063 SAR1AQ9NR31 198 aa18.02■□□□□ 0.48
PRKCA-203ENST00000578063 SPATA6Q9NWH7 488 aaPredicted RBP18.02■□□□□ 0.48
PRKCA-203ENST00000578063 CIDEBQ9UHD4 219 aa18.02■□□□□ 0.48
PRKCA-203ENST00000578063 HEBP2Q9Y5Z4 205 aa18.02■□□□□ 0.48
PRKCA-203ENST00000578063 UGDHO60701 494 aa18.01■□□□□ 0.47
PRKCA-203ENST00000578063 PDGFBP01127 241 aaPredicted RBP18.01■□□□□ 0.47
PRKCA-203ENST00000578063 ERGP11308 486 aa18.01■□□□□ 0.47
PRKCA-203ENST00000578063 CCND1P24385 295 aa18.01■□□□□ 0.47
PRKCA-203ENST00000578063 TBPL1P62380 186 aa18.01■□□□□ 0.47
PRKCA-203ENST00000578063 BNIP1Q12981 228 aa18.01■□□□□ 0.47
PRKCA-203ENST00000578063 GRB7Q14451 532 aa18.01■□□□□ 0.47
PRKCA-203ENST00000578063 RNF165Q6ZSG1 346 aa18.01■□□□□ 0.47
PRKCA-203ENST00000578063 IQCHQ86VS3 1027 aa18.01■□□□□ 0.47
PRKCA-203ENST00000578063 PARGQ86W56 976 aa18.01■□□□□ 0.47
PRKCA-203ENST00000578063 RAB42Q8N4Z0 105 aa18.01■□□□□ 0.47
PRKCA-203ENST00000578063 MFSD2AQ8NA29 543 aa18.01■□□□□ 0.47
PRKCA-203ENST00000578063 TUBB1Q9H4B7 451 aa18.01■□□□□ 0.47
PRKCA-203ENST00000578063 MVB12BQ9H7P6 319 aa18.01■□□□□ 0.47
PRKCA-203ENST00000578063 IMP3Q9NV31 184 aaKnown RBP18.01■□□□□ 0.47
PRKCA-203ENST00000578063 MRGBPQ9NV56 204 aa18.01■□□□□ 0.47
PRKCA-203ENST00000578063 INTS7Q9NVH2 962 aaKnown RBP18.01■□□□□ 0.47
PRKCA-203ENST00000578063 GPRC5BQ9NZH0 403 aa18.01■□□□□ 0.47
PRKCA-203ENST00000578063 POLG2Q9UHN1 485 aa18.01■□□□□ 0.47
PRKCA-203ENST00000578063 LNPEPQ9UIQ6 1025 aa18.01■□□□□ 0.47
PRKCA-203ENST00000578063 PCOLCE2Q9UKZ9 415 aa18.01■□□□□ 0.47
PRKCA-203ENST00000578063 PNMA8BQ9ULN7 279 aaPredicted RBP18.01■□□□□ 0.47
PRKCA-203ENST00000578063 TDRKHQ9Y2W6 561 aaKnown RBP18.01■□□□□ 0.47
PRKCA-203ENST00000578063 CFAP20Q9Y6A4 193 aaKnown RBP18.01■□□□□ 0.47
PRKCA-203ENST00000578063 PLXND1Q9Y4D7 1925 aa18.01■□□□□ 0.47
PRKCA-203ENST00000578063 E7ENX8 843 aa18.01■□□□□ 0.47
PRKCA-203ENST00000578063 SCAMP1O15126 338 aa18.01■□□□□ 0.47
PRKCA-203ENST00000578063 MAP3K13O43283 966 aa18.01■□□□□ 0.47
PRKCA-203ENST00000578063 PI15O43692 258 aa18.01■□□□□ 0.47
PRKCA-203ENST00000578063 NCF2P19878 526 aaPredicted RBP18.01■□□□□ 0.47
PRKCA-203ENST00000578063 ACTR1BP42025 376 aa18.01■□□□□ 0.47
PRKCA-203ENST00000578063 ACTR1AP61163 376 aa18.01■□□□□ 0.47
PRKCA-203ENST00000578063 RACK1P63244 317 aaKnown RBP18.01■□□□□ 0.47
PRKCA-203ENST00000578063 TAP2Q03519 686 aa18.01■□□□□ 0.47
PRKCA-203ENST00000578063 ILF3Q12906 894 aaKnown RBP eCLIP18.01■□□□□ 0.472e-6■■■■□ 23
PRKCA-203ENST00000578063 KRT72Q14CN4 511 aa18.01■□□□□ 0.47
PRKCA-203ENST00000578063 ABRAXAS1Q6UWZ7 409 aa18.01■□□□□ 0.47
PRKCA-203ENST00000578063 L3MBTL4Q8NA19 623 aa18.01■□□□□ 0.47
PRKCA-203ENST00000578063 PPFIBP2Q8ND30 876 aa18.01■□□□□ 0.47
PRKCA-203ENST00000578063 PRR11Q96HE9 360 aaPredicted RBP18.01■□□□□ 0.47
PRKCA-203ENST00000578063 HSPA12BQ96MM6 686 aa18.01■□□□□ 0.47
PRKCA-203ENST00000578063 FERD3LQ96RJ6 166 aa18.01■□□□□ 0.47
PRKCA-203ENST00000578063 TUBB6Q9BUF5 446 aa18.01■□□□□ 0.47
PRKCA-203ENST00000578063 SGPP1Q9BX95 441 aa18.01■□□□□ 0.47
PRKCA-203ENST00000578063 TMEM168Q9H0V1 697 aa18.01■□□□□ 0.47
PRKCA-203ENST00000578063 CCDC177Q9NQR7 707 aaPredicted RBP18.01■□□□□ 0.47
PRKCA-203ENST00000578063 PRDM8Q9NQV8 689 aa18.01■□□□□ 0.47
PRKCA-203ENST00000578063 TXLNGQ9NUQ3 528 aa18.01■□□□□ 0.47
PRKCA-203ENST00000578063 SLC12A4Q9UP95 1085 aa18.01■□□□□ 0.47
PRKCA-203ENST00000578063 BTRCQ9Y297 605 aa18.01■□□□□ 0.47
PRKCA-203ENST00000578063 DCXO43602 365 aa18■□□□□ 0.47
PRKCA-203ENST00000578063 CD38P28907 300 aa18■□□□□ 0.47
PRKCA-203ENST00000578063 BLKP51451 505 aa18■□□□□ 0.47
PRKCA-203ENST00000578063 PCDH1Q08174 1060 aa18■□□□□ 0.47
PRKCA-203ENST00000578063 EIF2B5Q13144 721 aaKnown RBP18■□□□□ 0.47
PRKCA-203ENST00000578063 FZD2Q14332 565 aa18■□□□□ 0.47
PRKCA-203ENST00000578063 CLCA4Q14CN2 919 aa18■□□□□ 0.47
PRKCA-203ENST00000578063 XKR7Q5GH72 579 aa18■□□□□ 0.47
PRKCA-203ENST00000578063 DUS1LQ6P1R4 473 aaKnown RBP18■□□□□ 0.47
PRKCA-203ENST00000578063 MYLK4Q86YV6 388 aaPredicted RBP18■□□□□ 0.47
PRKCA-203ENST00000578063 LRRC56Q8IYG6 542 aaPredicted RBP18■□□□□ 0.47
PRKCA-203ENST00000578063 DEFB119Q8N690 84 aa18■□□□□ 0.47
PRKCA-203ENST00000578063 RAB11FIP5Q9BXF6 653 aa18■□□□□ 0.47
PRKCA-203ENST00000578063 PRMT8Q9NR22 394 aaPredicted RBP18■□□□□ 0.47
PRKCA-203ENST00000578063 RIC8BQ9NVN3 520 aa18■□□□□ 0.47
PRKCA-203ENST00000578063 ARMCX1Q9P291 453 aa18■□□□□ 0.47
PRKCA-203ENST00000578063 RNF11Q9Y3C5 154 aa18■□□□□ 0.47
PRKCA-203ENST00000578063 KCNE2Q9Y6J6 123 aa18■□□□□ 0.47
PRKCA-203ENST00000578063 CLGNO14967 610 aa17.99■□□□□ 0.47
PRKCA-203ENST00000578063 KDM1AO60341 852 aa17.99■□□□□ 0.47
PRKCA-203ENST00000578063 ATP5HO75947 161 aa17.99■□□□□ 0.47
PRKCA-203ENST00000578063 MTHFD1P11586 935 aaKnown RBP17.99■□□□□ 0.47
PRKCA-203ENST00000578063 AK4P27144 223 aaPredicted RBP17.99■□□□□ 0.47
PRKCA-203ENST00000578063 PRKG2Q13237 762 aa17.99■□□□□ 0.47
PRKCA-203ENST00000578063 UBAP2LQ14157 1087 aaKnown RBP17.99■□□□□ 0.47
PRKCA-203ENST00000578063 KRT33BQ14525 404 aa17.99■□□□□ 0.47
PRKCA-203ENST00000578063 RPE65Q16518 533 aa17.99■□□□□ 0.47
PRKCA-203ENST00000578063 CYP2A13Q16696 494 aa17.99■□□□□ 0.47
PRKCA-203ENST00000578063 TJAP1Q5JTD0 557 aa17.99■□□□□ 0.47
PRKCA-203ENST00000578063 LIPJQ5W064 366 aa17.99■□□□□ 0.47
PRKCA-203ENST00000578063 LARP4Q71RC2 724 aaKnown RBP eCLIP17.99■□□□□ 0.472e-7■■■■■ 38.4
PRKCA-203ENST00000578063 C3orf30Q96M34 536 aa17.99■□□□□ 0.47
PRKCA-203ENST00000578063 OR4K3Q96R72 315 aa17.99■□□□□ 0.47
PRKCA-203ENST00000578063 MIPEPQ99797 713 aa17.99■□□□□ 0.47
PRKCA-203ENST00000578063 CCDC106Q9BWC9 280 aa17.99■□□□□ 0.47
PRKCA-203ENST00000578063 GSDMCQ9BYG8 508 aa17.99■□□□□ 0.47
PRKCA-203ENST00000578063 TBC1D29Q9UFV1 150 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms