RNA–Protein interactions for RNA: ENST00000577824.5

MKS1-206, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 1,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-206ENST00000577824 PNLIPRP1P54315 467 aa12.3□□□□□ -0.44
MKS1-206ENST00000577824 CFHR1Q03591 330 aa12.3□□□□□ -0.44
MKS1-206ENST00000577824 KIR2DS3Q14952 304 aa12.3□□□□□ -0.44
MKS1-206ENST00000577824 CDCP2Q5VXM1 449 aa12.3□□□□□ -0.44
MKS1-206ENST00000577824 KLC3Q6P597 504 aa12.3□□□□□ -0.44
MKS1-206ENST00000577824 FRA10AC1Q70Z53 315 aa12.3□□□□□ -0.44
MKS1-206ENST00000577824 CACTIN-AS1Q8N1I8 211 aa12.3□□□□□ -0.44
MKS1-206ENST00000577824 TMEM151AQ8N4L1 468 aa12.3□□□□□ -0.44
MKS1-206ENST00000577824 RAB42Q8N4Z0 105 aa12.3□□□□□ -0.44
MKS1-206ENST00000577824 BANPQ8N9N5 519 aa12.3□□□□□ -0.44
MKS1-206ENST00000577824 FLVCR1-AS1Q8TAF5 88 aa12.3□□□□□ -0.44
MKS1-206ENST00000577824 ZNF480Q8WV37 535 aa12.3□□□□□ -0.44
MKS1-206ENST00000577824 ATL1Q8WXF7 558 aa12.3□□□□□ -0.44
MKS1-206ENST00000577824 ALKBH8Q96BT7 664 aaKnown RBP12.3□□□□□ -0.44
MKS1-206ENST00000577824 APOPT1Q96IL0 206 aa12.3□□□□□ -0.44
MKS1-206ENST00000577824 CD180Q99467 661 aa12.3□□□□□ -0.44
MKS1-206ENST00000577824 SH3GL2Q99962 352 aa12.3□□□□□ -0.44
MKS1-206ENST00000577824 TRIM54Q9BYV2 358 aa12.3□□□□□ -0.44
MKS1-206ENST00000577824 ALG9Q9H6U8 611 aa12.3□□□□□ -0.44
MKS1-206ENST00000577824 SSU72Q9NP77 194 aaKnown RBP12.3□□□□□ -0.44
MKS1-206ENST00000577824 ZNF358Q9NW07 568 aa12.3□□□□□ -0.44
MKS1-206ENST00000577824 ZNF446Q9NWS9 450 aa12.3□□□□□ -0.44
MKS1-206ENST00000577824 NUDT4Q9NZJ9 180 aa12.3□□□□□ -0.44
MKS1-206ENST00000577824 SEMA5BQ9P283 1151 aa12.3□□□□□ -0.44
MKS1-206ENST00000577824 XPR1Q9UBH6 696 aa12.3□□□□□ -0.44
MKS1-206ENST00000577824 POMT2Q9UKY4 750 aa12.3□□□□□ -0.44
MKS1-206ENST00000577824 PLAGL1Q9UM63 463 aa12.3□□□□□ -0.44
MKS1-206ENST00000577824 APOBEC2Q9Y235 224 aaKnown RBP12.3□□□□□ -0.44
MKS1-206ENST00000577824 GOLGA4Q13439 2230 aaKnown RBP12.3□□□□□ -0.44
MKS1-206ENST00000577824 SPAARA0A1B0GVQ0 90 aa12.29□□□□□ -0.44
MKS1-206ENST00000577824 SYCE1LA8MT33 242 aa12.29□□□□□ -0.44
MKS1-206ENST00000577824 FOXO6A8MYZ6 492 aa12.29□□□□□ -0.44
MKS1-206ENST00000577824 E7ENX8 843 aa12.29□□□□□ -0.44
MKS1-206ENST00000577824 BTN3A3O00478 584 aa12.29□□□□□ -0.44
MKS1-206ENST00000577824 GIPC1O14908 333 aa12.29□□□□□ -0.44
MKS1-206ENST00000577824 CASC3O15234 703 aaKnown RBP12.29□□□□□ -0.44
MKS1-206ENST00000577824 TOX3O15405 576 aaPredicted RBP12.29□□□□□ -0.44
MKS1-206ENST00000577824 SASH3O75995 380 aa12.29□□□□□ -0.44
MKS1-206ENST00000577824 FKBP9O95302 570 aa12.29□□□□□ -0.44
MKS1-206ENST00000577824 CHRM5P08912 532 aaPredicted RBP12.29□□□□□ -0.44
MKS1-206ENST00000577824 HIST1H2AGP0C0S8 130 aaPredicted RBP12.29□□□□□ -0.44
MKS1-206ENST00000577824 SBK3P0C264 359 aa12.29□□□□□ -0.44
MKS1-206ENST00000577824 ANKRD34CP0C6C1 535 aa12.29□□□□□ -0.44
MKS1-206ENST00000577824 MYZAPP0CAP1 466 aa12.29□□□□□ -0.44
MKS1-206ENST00000577824 HIST1H2ADP20671 130 aa12.29□□□□□ -0.44
MKS1-206ENST00000577824 GGT5P36269 586 aa12.29□□□□□ -0.44
MKS1-206ENST00000577824 SLC6A12P48065 614 aa12.29□□□□□ -0.44
MKS1-206ENST00000577824 KCNC1P48547 511 aa12.29□□□□□ -0.44
MKS1-206ENST00000577824 CCL7P80098 99 aa12.29□□□□□ -0.44
MKS1-206ENST00000577824 SIM1P81133 766 aaPredicted RBP12.29□□□□□ -0.44
MKS1-206ENST00000577824 NFKB2Q00653 900 aa12.29□□□□□ -0.44
MKS1-206ENST00000577824 INSM1Q01101 510 aaPredicted RBP12.29□□□□□ -0.44
MKS1-206ENST00000577824 TAP2Q03519 686 aa12.29□□□□□ -0.44
MKS1-206ENST00000577824 SLC5A12Q1EHB4 618 aa12.29□□□□□ -0.44
MKS1-206ENST00000577824 ZXDCQ2QGD7 858 aaPredicted RBP12.29□□□□□ -0.44
MKS1-206ENST00000577824 MBOAT1Q6ZNC8 495 aa12.29□□□□□ -0.44
MKS1-206ENST00000577824 CDHR3Q6ZTQ4 885 aa12.29□□□□□ -0.44
MKS1-206ENST00000577824 TMPRSS9Q7Z410 1059 aa12.29□□□□□ -0.44
MKS1-206ENST00000577824 PRSS42Q7Z5A4 293 aa12.29□□□□□ -0.44
MKS1-206ENST00000577824 SLCO6A1Q86UG4 719 aa12.29□□□□□ -0.44
MKS1-206ENST00000577824 GPSM1Q86YR5 675 aa12.29□□□□□ -0.44
MKS1-206ENST00000577824 SLITRK4Q8IW52 837 aa12.29□□□□□ -0.44
MKS1-206ENST00000577824 SRRM1Q8IYB3 904 aaKnown RBP12.29□□□□□ -0.44
MKS1-206ENST00000577824 TCAIMQ8N3R3 496 aa12.29□□□□□ -0.44
MKS1-206ENST00000577824 Q8N9G6 341 aaPredicted RBP12.29□□□□□ -0.44
MKS1-206ENST00000577824 OR4D9Q8NGE8 314 aa12.29□□□□□ -0.44
MKS1-206ENST00000577824 OR56A3Q8NH54 315 aa12.29□□□□□ -0.44
MKS1-206ENST00000577824 UBTD2Q8WUN7 234 aa12.29□□□□□ -0.44
MKS1-206ENST00000577824 JPH3Q8WXH2 748 aaPredicted RBP12.29□□□□□ -0.44
MKS1-206ENST00000577824 RHBDF1Q96CC6 855 aa12.29□□□□□ -0.44
MKS1-206ENST00000577824 TLCD1Q96CP7 247 aa12.29□□□□□ -0.44
MKS1-206ENST00000577824 HIST1H2AHQ96KK5 128 aa12.29□□□□□ -0.44
MKS1-206ENST00000577824 TSNARE1Q96NA8 513 aa12.29□□□□□ -0.44
MKS1-206ENST00000577824 IL17FQ96PD4 163 aa12.29□□□□□ -0.44
MKS1-206ENST00000577824 RUFY1Q96T51 708 aa12.29□□□□□ -0.44
MKS1-206ENST00000577824 NRTNQ99748 197 aa12.29□□□□□ -0.44
MKS1-206ENST00000577824 HIST1H2AJQ99878 128 aa12.29□□□□□ -0.44
MKS1-206ENST00000577824 MRPL57Q9BQC6 102 aaKnown RBP12.29□□□□□ -0.44
MKS1-206ENST00000577824 NUDT22Q9BRQ3 303 aa12.29□□□□□ -0.44
MKS1-206ENST00000577824 H2AFJQ9BTM1 129 aa12.29□□□□□ -0.44
MKS1-206ENST00000577824 SGPP1Q9BX95 441 aa12.29□□□□□ -0.44
MKS1-206ENST00000577824 PITPNM3Q9BZ71 974 aa12.29□□□□□ -0.44
MKS1-206ENST00000577824 UNKQ9C0B0 810 aaKnown RBP12.29□□□□□ -0.44
MKS1-206ENST00000577824 STMN4Q9H169 189 aaPredicted RBP12.29□□□□□ -0.44
MKS1-206ENST00000577824 MRPL46Q9H2W6 279 aaKnown RBP12.29□□□□□ -0.44
MKS1-206ENST00000577824 XKR8Q9H6D3 395 aa12.29□□□□□ -0.44
MKS1-206ENST00000577824 TMBIM4Q9HC24 238 aa12.29□□□□□ -0.44
MKS1-206ENST00000577824 ARL15Q9NXU5 204 aa12.29□□□□□ -0.44
MKS1-206ENST00000577824 DCDC2Q9UHG0 476 aa12.29□□□□□ -0.44
MKS1-206ENST00000577824 RNF112Q9ULX5 631 aa12.29□□□□□ -0.44
MKS1-206ENST00000577824 KLK4Q9Y5K2 254 aa12.29□□□□□ -0.44
MKS1-206ENST00000577824 PIPSLA2A3N6 862 aa12.28□□□□□ -0.44
MKS1-206ENST00000577824 OR6C74A6NCV1 312 aa12.28□□□□□ -0.44
MKS1-206ENST00000577824 PABPN1LA6NDY0 278 aaKnown RBP12.28□□□□□ -0.44
MKS1-206ENST00000577824 C2orf74A8MZ97 194 aa12.28□□□□□ -0.44
MKS1-206ENST00000577824 GOLGA8RI6L899 631 aa12.28□□□□□ -0.44
MKS1-206ENST00000577824 TK2O00142 265 aa12.28□□□□□ -0.44
MKS1-206ENST00000577824 TYROBPO43914 113 aa12.28□□□□□ -0.44
MKS1-206ENST00000577824 IPO13O94829 963 aaKnown RBP12.28□□□□□ -0.44
MKS1-206ENST00000577824 ANXA5P08758 320 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms