RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 MNDAP41218 407 aa2.34□□□□□ -2.03
COPS3-213ENST00000577210 THOP1P52888 689 aa2.34□□□□□ -2.03
COPS3-213ENST00000577210 MAZP56270 477 aaKnown RBP2.34□□□□□ -2.03
COPS3-213ENST00000577210 TUBB4BP68371 445 aa2.34□□□□□ -2.03
COPS3-213ENST00000577210 RBPJQ06330 500 aa2.34□□□□□ -2.03
COPS3-213ENST00000577210 LGALS3BPQ08380 585 aa2.34□□□□□ -2.03
COPS3-213ENST00000577210 VWC2Q2TAL6 325 aa2.34□□□□□ -2.03
COPS3-213ENST00000577210 FAM174BQ3ZCQ3 159 aa2.34□□□□□ -2.03
COPS3-213ENST00000577210 SYT14P1Q58G82 188 aa2.34□□□□□ -2.03
COPS3-213ENST00000577210 STXBP5Q5T5C0 1151 aa2.34□□□□□ -2.03
COPS3-213ENST00000577210 C11orf88Q6PI97 169 aa2.34□□□□□ -2.03
COPS3-213ENST00000577210 RAD9BQ6WBX8 426 aa2.34□□□□□ -2.03
COPS3-213ENST00000577210 ZBTB49Q6ZSB9 765 aa2.34□□□□□ -2.03
COPS3-213ENST00000577210 GET4Q7L5D6 327 aaPredicted RBP2.34□□□□□ -2.03
COPS3-213ENST00000577210 METTL23Q86XA0 190 aa2.34□□□□□ -2.03
COPS3-213ENST00000577210 CARNMT1Q8N4J0 409 aa2.34□□□□□ -2.03
COPS3-213ENST00000577210 CHCHD4Q8N4Q1 142 aa2.34□□□□□ -2.03
COPS3-213ENST00000577210 TMCO5AQ8N6Q1 288 aa2.34□□□□□ -2.03
COPS3-213ENST00000577210 PI4KAP1Q8N8J0 262 aa2.34□□□□□ -2.03
COPS3-213ENST00000577210 IQUBQ8NA54 791 aa2.34□□□□□ -2.03
COPS3-213ENST00000577210 SLC4A11Q8NBS3 891 aa2.34□□□□□ -2.03
COPS3-213ENST00000577210 NOA1Q8NC60 698 aaKnown RBP2.34□□□□□ -2.03
COPS3-213ENST00000577210 CAMKVQ8NCB2 501 aa2.34□□□□□ -2.03
COPS3-213ENST00000577210 MSANTD4Q8NCY6 345 aa2.34□□□□□ -2.03
COPS3-213ENST00000577210 KLHDC9Q8NEP7 349 aa2.34□□□□□ -2.03
COPS3-213ENST00000577210 OR5M8Q8NGP6 311 aa2.34□□□□□ -2.03
COPS3-213ENST00000577210 KIF18AQ8NI77 898 aa2.34□□□□□ -2.03
COPS3-213ENST00000577210 C9orf43Q8TAL5 461 aaPredicted RBP2.34□□□□□ -2.03
COPS3-213ENST00000577210 MGARPQ8TDB4 240 aa2.34□□□□□ -2.03
COPS3-213ENST00000577210 LRRC8CQ8TDW0 803 aa2.34□□□□□ -2.03
COPS3-213ENST00000577210 PHLDA1Q8WV24 401 aaPredicted RBP2.34□□□□□ -2.03
COPS3-213ENST00000577210 DNASE2BQ8WZ79 361 aa2.34□□□□□ -2.03
COPS3-213ENST00000577210 IRGQQ8WZA9 623 aa2.34□□□□□ -2.03
COPS3-213ENST00000577210 SYN2Q92777 582 aaPredicted RBP2.34□□□□□ -2.03
COPS3-213ENST00000577210 TMEM143Q96AN5 459 aa2.34□□□□□ -2.03
COPS3-213ENST00000577210 FER1L6-AS2Q96M78 137 aa2.34□□□□□ -2.03
COPS3-213ENST00000577210 FEVQ99581 238 aa2.34□□□□□ -2.03
COPS3-213ENST00000577210 RHNO1Q9BSD3 238 aa2.34□□□□□ -2.03
COPS3-213ENST00000577210 NAA11Q9BSU3 229 aaPredicted RBP2.34□□□□□ -2.03
COPS3-213ENST00000577210 THUMPD3Q9BV44 507 aaKnown RBP2.34□□□□□ -2.03
COPS3-213ENST00000577210 KRTAP2-2Q9BYT5 123 aa2.34□□□□□ -2.03
COPS3-213ENST00000577210 ARRDC1-AS1Q9H2J1 176 aa2.34□□□□□ -2.03
COPS3-213ENST00000577210 CNOT10Q9H9A5 744 aaKnown RBP2.34□□□□□ -2.03
COPS3-213ENST00000577210 CDH20Q9HBT6 801 aa2.34□□□□□ -2.03
COPS3-213ENST00000577210 MBNL1Q9NR56 388 aaKnown RBP2.34□□□□□ -2.03
COPS3-213ENST00000577210 TXLNGQ9NUQ3 528 aa2.34□□□□□ -2.03
COPS3-213ENST00000577210 PRMT7Q9NVM4 692 aaPredicted RBP2.34□□□□□ -2.03
COPS3-213ENST00000577210 TBC1D7Q9P0N9 293 aa2.34□□□□□ -2.03
COPS3-213ENST00000577210 TXNDC16Q9P2K2 825 aa2.34□□□□□ -2.03
COPS3-213ENST00000577210 B3GAT1Q9P2W7 334 aa2.34□□□□□ -2.03
COPS3-213ENST00000577210 C19orf25Q9UFG5 118 aaPredicted RBP2.34□□□□□ -2.03
COPS3-213ENST00000577210 RASAL2Q9UJF2 1139 aa2.34□□□□□ -2.03
COPS3-213ENST00000577210 SNX7Q9UNH6 387 aa2.34□□□□□ -2.03
COPS3-213ENST00000577210 C2CD2Q9Y426 696 aa2.34□□□□□ -2.03
COPS3-213ENST00000577210 ABCC9O60706 1549 aa2.33□□□□□ -2.04
COPS3-213ENST00000577210 GIMAP1-GIMAP5A0A087WTJ2 511 aa2.33□□□□□ -2.04
COPS3-213ENST00000577210 IGHV4-61A0A0C4DH41 118 aa2.33□□□□□ -2.04
COPS3-213ENST00000577210 ARHGEF37A1IGU5 675 aa2.33□□□□□ -2.04
COPS3-213ENST00000577210 TMEM221A6NGB7 291 aa2.33□□□□□ -2.04
COPS3-213ENST00000577210 ANXA2P2A6NMY6 339 aa2.33□□□□□ -2.04
COPS3-213ENST00000577210 C2orf81A6NN90 581 aa2.33□□□□□ -2.04
COPS3-213ENST00000577210 PMS2P5A8MQ11 134 aa2.33□□□□□ -2.04
COPS3-213ENST00000577210 PTGESO14684 152 aa2.33□□□□□ -2.04
COPS3-213ENST00000577210 EPHB6O15197 1021 aa2.33□□□□□ -2.04
COPS3-213ENST00000577210 ATP6V0E1O15342 81 aa2.33□□□□□ -2.04
COPS3-213ENST00000577210 LINC01565O15544 149 aa2.33□□□□□ -2.04
COPS3-213ENST00000577210 SLC7A4O43246 635 aa2.33□□□□□ -2.04
COPS3-213ENST00000577210 OR10H2O60403 315 aa2.33□□□□□ -2.04
COPS3-213ENST00000577210 KRT33AO76009 404 aa2.33□□□□□ -2.04
COPS3-213ENST00000577210 SLCO2B1O94956 709 aa2.33□□□□□ -2.04
COPS3-213ENST00000577210 WDPCPO95876 746 aa2.33□□□□□ -2.04
COPS3-213ENST00000577210 PENKP01210 267 aaPredicted RBP2.33□□□□□ -2.04
COPS3-213ENST00000577210 IGHV4-59P01825 116 aa2.33□□□□□ -2.04
COPS3-213ENST00000577210 UMODP07911 640 aa2.33□□□□□ -2.04
COPS3-213ENST00000577210 FAM157CP0CG43 387 aa2.33□□□□□ -2.04
COPS3-213ENST00000577210 PTAFRP25105 342 aa2.33□□□□□ -2.04
COPS3-213ENST00000577210 HOXC8P31273 242 aa2.33□□□□□ -2.04
COPS3-213ENST00000577210 DCTP40126 519 aa2.33□□□□□ -2.04
COPS3-213ENST00000577210 GP5P40197 560 aa2.33□□□□□ -2.04
COPS3-213ENST00000577210 LHX1P48742 406 aa2.33□□□□□ -2.04
COPS3-213ENST00000577210 CDH11P55287 796 aa2.33□□□□□ -2.04
COPS3-213ENST00000577210 TPD52P55327 224 aaPredicted RBP2.33□□□□□ -2.04
COPS3-213ENST00000577210 PMP22Q01453 160 aa2.33□□□□□ -2.04
COPS3-213ENST00000577210 SCN1BQ07699 218 aa2.33□□□□□ -2.04
COPS3-213ENST00000577210 ITGA7Q13683 1181 aa2.33□□□□□ -2.04
COPS3-213ENST00000577210 NFE2L1Q14494 772 aa2.33□□□□□ -2.04
COPS3-213ENST00000577210 UGCGQ16739 394 aa2.33□□□□□ -2.04
COPS3-213ENST00000577210 HYAL4Q2M3T9 481 aa2.33□□□□□ -2.04
COPS3-213ENST00000577210 KIAA1644Q3SXP7 199 aa2.33□□□□□ -2.04
COPS3-213ENST00000577210 WDR38Q5JTN6 314 aa2.33□□□□□ -2.04
COPS3-213ENST00000577210 KRBOX4Q5JUW0 171 aa2.33□□□□□ -2.04
COPS3-213ENST00000577210 CYP4A22Q5TCH4 519 aa2.33□□□□□ -2.04
COPS3-213ENST00000577210 ZNF449Q6P9G9 518 aa2.33□□□□□ -2.04
COPS3-213ENST00000577210 CORO6Q6QEF8 472 aa2.33□□□□□ -2.04
COPS3-213ENST00000577210 SUSD1Q6UWL2 747 aa2.33□□□□□ -2.04
COPS3-213ENST00000577210 ENPP7Q6UWV6 458 aa2.33□□□□□ -2.04
COPS3-213ENST00000577210 MSANTD1Q6ZTZ1 278 aa2.33□□□□□ -2.04
COPS3-213ENST00000577210 G2E3Q7L622 706 aa2.33□□□□□ -2.04
COPS3-213ENST00000577210 DGLUCYQ7Z3D6 616 aa2.33□□□□□ -2.04
COPS3-213ENST00000577210 GLRX5Q86SX6 157 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms