RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 LGI4Q8N135 537 aa17.49■□□□□ 0.39
ATPAF1-214ENST00000576409 ATL1Q8WXF7 558 aa17.49■□□□□ 0.39
ATPAF1-214ENST00000576409 DPH2Q9BQC3 489 aaPredicted RBP17.49■□□□□ 0.39
ATPAF1-214ENST00000576409 ADAM30Q9UKF2 790 aa17.49■□□□□ 0.39
ATPAF1-214ENST00000576409 ATP6AP1Q15904 470 aa17.49■□□□□ 0.39
ATPAF1-214ENST00000576409 KCNA10Q16322 511 aa17.49■□□□□ 0.39
ATPAF1-214ENST00000576409 FAM110CQ1W6H9 321 aa17.49■□□□□ 0.39
ATPAF1-214ENST00000576409 CXorf57Q6NSI4 855 aaKnown RBP17.49■□□□□ 0.39
ATPAF1-214ENST00000576409 MACC1Q6ZN28 852 aa17.49■□□□□ 0.39
ATPAF1-214ENST00000576409 ANKFN1Q8N957 763 aa17.49■□□□□ 0.39
ATPAF1-214ENST00000576409 ABHD11Q8NFV4 315 aa17.49■□□□□ 0.39
ATPAF1-214ENST00000576409 Q96MT0 163 aa17.49■□□□□ 0.39
ATPAF1-214ENST00000576409 SLC2A13Q96QE2 648 aa17.49■□□□□ 0.39
ATPAF1-214ENST00000576409 RANBP9Q96S59 729 aa17.49■□□□□ 0.39
ATPAF1-214ENST00000576409 THUMPD1Q9NXG2 353 aaKnown RBP17.49■□□□□ 0.39
ATPAF1-214ENST00000576409 FADS2P1A8MWK0 482 aa17.48■□□□□ 0.39
ATPAF1-214ENST00000576409 LDB2O43679 373 aa17.48■□□□□ 0.39
ATPAF1-214ENST00000576409 IFNW1P05000 195 aa17.48■□□□□ 0.39
ATPAF1-214ENST00000576409 ARRB2P32121 409 aa17.48■□□□□ 0.39
ATPAF1-214ENST00000576409 RELAQ04206 551 aa17.48■□□□□ 0.39
ATPAF1-214ENST00000576409 ABRAXAS2Q15018 415 aa17.48■□□□□ 0.39
ATPAF1-214ENST00000576409 PTCHD3Q3KNS1 767 aa17.48■□□□□ 0.39
ATPAF1-214ENST00000576409 RANBP10Q6VN20 620 aa17.48■□□□□ 0.39
ATPAF1-214ENST00000576409 PGBD3Q8N328 593 aa17.48■□□□□ 0.39
ATPAF1-214ENST00000576409 OR10T2Q8NGX3 314 aa17.48■□□□□ 0.39
ATPAF1-214ENST00000576409 TFAP2CQ92754 450 aa17.48■□□□□ 0.39
ATPAF1-214ENST00000576409 REPS1Q96D71 796 aa17.48■□□□□ 0.39
ATPAF1-214ENST00000576409 ANKRD60Q9BZ19 345 aa17.48■□□□□ 0.39
ATPAF1-214ENST00000576409 WDR6Q9NNW5 1121 aaKnown RBP17.48■□□□□ 0.39
ATPAF1-214ENST00000576409 SEMA3GQ9NS98 782 aa17.48■□□□□ 0.39
ATPAF1-214ENST00000576409 IGSF5Q9NSI5 407 aa17.48■□□□□ 0.39
ATPAF1-214ENST00000576409 TMEM9Q9P0T7 183 aa17.48■□□□□ 0.39
ATPAF1-214ENST00000576409 NAV1Q8NEY1 1877 aa17.48■□□□□ 0.39
ATPAF1-214ENST00000576409 SAGE2PA6NJ88 616 aa17.48■□□□□ 0.39
ATPAF1-214ENST00000576409 PTNP21246 168 aa17.48■□□□□ 0.39
ATPAF1-214ENST00000576409 GPR1P46091 355 aa17.48■□□□□ 0.39
ATPAF1-214ENST00000576409 RXRGP48443 463 aa17.48■□□□□ 0.39
ATPAF1-214ENST00000576409 ANXA11P50995 505 aaKnown RBP17.48■□□□□ 0.39
ATPAF1-214ENST00000576409 PHC1P78364 1004 aa17.48■□□□□ 0.39
ATPAF1-214ENST00000576409 FPGSQ05932 587 aa17.48■□□□□ 0.39
ATPAF1-214ENST00000576409 STX4Q12846 297 aa17.48■□□□□ 0.39
ATPAF1-214ENST00000576409 ZNF404Q494X3 552 aa17.48■□□□□ 0.39
ATPAF1-214ENST00000576409 CFAP206Q8IYR0 622 aa17.48■□□□□ 0.39
ATPAF1-214ENST00000576409 RGL4Q8IZJ4 473 aa17.48■□□□□ 0.39
ATPAF1-214ENST00000576409 ZNF366Q8N895 744 aa17.48■□□□□ 0.39
ATPAF1-214ENST00000576409 GLB1L3Q8NCI6 653 aaPredicted RBP17.48■□□□□ 0.39
ATPAF1-214ENST00000576409 OR4K1Q8NGD4 311 aa17.48■□□□□ 0.39
ATPAF1-214ENST00000576409 ZNF420Q8TAQ5 688 aaPredicted RBP17.48■□□□□ 0.39
ATPAF1-214ENST00000576409 NARS2Q96I59 477 aaKnown RBP17.48■□□□□ 0.39
ATPAF1-214ENST00000576409 SMOC2Q9H3U7 446 aa17.48■□□□□ 0.39
ATPAF1-214ENST00000576409 GSTO2Q9H4Y5 243 aa17.48■□□□□ 0.39
ATPAF1-214ENST00000576409 TUBA8Q9NY65 449 aaPredicted RBP17.48■□□□□ 0.39
ATPAF1-214ENST00000576409 FZD4Q9ULV1 537 aa17.48■□□□□ 0.39
ATPAF1-214ENST00000576409 ZNF487B1APH4 448 aa17.48■□□□□ 0.39
ATPAF1-214ENST00000576409 ERN1O75460 977 aaKnown RBP17.48■□□□□ 0.39
ATPAF1-214ENST00000576409 GADD45GO95257 159 aa17.48■□□□□ 0.39
ATPAF1-214ENST00000576409 BMP2P12643 396 aa17.48■□□□□ 0.39
ATPAF1-214ENST00000576409 C5orf22Q49AR2 442 aa17.48■□□□□ 0.39
ATPAF1-214ENST00000576409 NIPAL1Q6NVV3 410 aa17.48■□□□□ 0.39
ATPAF1-214ENST00000576409 DTWD1Q8N5C7 304 aa17.48■□□□□ 0.39
ATPAF1-214ENST00000576409 IMP4Q96G21 291 aaKnown RBP17.48■□□□□ 0.39
ATPAF1-214ENST00000576409 PYURFQ96I23 114 aa17.48■□□□□ 0.39
ATPAF1-214ENST00000576409 MYRFLQ96LU7 910 aa17.48■□□□□ 0.39
ATPAF1-214ENST00000576409 WRAP53Q9BUR4 548 aaKnown RBP17.48■□□□□ 0.39
ATPAF1-214ENST00000576409 YTHDF1Q9BYJ9 559 aaKnown RBP17.48■□□□□ 0.39
ATPAF1-214ENST00000576409 CCRL2O00421 344 aa17.47■□□□□ 0.39
ATPAF1-214ENST00000576409 GJA1P17302 382 aa17.47■□□□□ 0.39
ATPAF1-214ENST00000576409 POLR2EP19388 210 aaKnown RBP17.47■□□□□ 0.39
ATPAF1-214ENST00000576409 INHBCP55103 352 aa17.47■□□□□ 0.39
ATPAF1-214ENST00000576409 CDH4P55283 916 aa17.47■□□□□ 0.39
ATPAF1-214ENST00000576409 LRP8Q14114 963 aa17.47■□□□□ 0.39
ATPAF1-214ENST00000576409 PCBP2Q15366 365 aaKnown RBP eCLIP17.47■□□□□ 0.39
ATPAF1-214ENST00000576409 RFTN2Q52LD8 501 aaPredicted RBP17.47■□□□□ 0.39
ATPAF1-214ENST00000576409 CRTC2Q53ET0 693 aaPredicted RBP17.47■□□□□ 0.39
ATPAF1-214ENST00000576409 VTCN1Q7Z7D3 282 aa17.47■□□□□ 0.39
ATPAF1-214ENST00000576409 RAVER1Q8IY67 606 aaKnown RBP17.47■□□□□ 0.39
ATPAF1-214ENST00000576409 MINDY1Q8N5J2 469 aa17.47■□□□□ 0.39
ATPAF1-214ENST00000576409 LGALS12Q96DT0 336 aa17.47■□□□□ 0.39
ATPAF1-214ENST00000576409 HSH2DQ96JZ2 352 aa17.47■□□□□ 0.39
ATPAF1-214ENST00000576409 ZNF597Q96LX8 424 aa17.47■□□□□ 0.39
ATPAF1-214ENST00000576409 UCKL1Q9NWZ5 548 aa17.47■□□□□ 0.39
ATPAF1-214ENST00000576409 PEX16Q9Y5Y5 336 aa17.47■□□□□ 0.39
ATPAF1-214ENST00000576409 CPSF4LA6NMK7 179 aaKnown RBP17.47■□□□□ 0.39
ATPAF1-214ENST00000576409 NEDD8-MDP1E9PL57 170 aa17.47■□□□□ 0.39
ATPAF1-214ENST00000576409 H3BM21 787 aa17.47■□□□□ 0.39
ATPAF1-214ENST00000576409 HOXA2O43364 376 aa17.47■□□□□ 0.39
ATPAF1-214ENST00000576409 GJB3O75712 270 aa17.47■□□□□ 0.39
ATPAF1-214ENST00000576409 PRPS2P11908 318 aa17.47■□□□□ 0.39
ATPAF1-214ENST00000576409 MAPKAPK2P49137 400 aa17.47■□□□□ 0.39
ATPAF1-214ENST00000576409 ABATP80404 500 aa17.47■□□□□ 0.39
ATPAF1-214ENST00000576409 ZBTB6Q15916 424 aa17.47■□□□□ 0.39
ATPAF1-214ENST00000576409 CDC73Q6P1J9 531 aa17.47■□□□□ 0.39
ATPAF1-214ENST00000576409 SLC7A5P1Q8MH63 180 aa17.47■□□□□ 0.39
ATPAF1-214ENST00000576409 LSMEM2Q8N112 164 aa17.47■□□□□ 0.39
ATPAF1-214ENST00000576409 SCAIQ8N9R8 606 aa17.47■□□□□ 0.39
ATPAF1-214ENST00000576409 SEZ6LQ9BYH1 1024 aa17.47■□□□□ 0.39
ATPAF1-214ENST00000576409 DERL2Q9GZP9 239 aa17.47■□□□□ 0.39
ATPAF1-214ENST00000576409 MRPL17Q9NRX2 175 aaKnown RBP17.47■□□□□ 0.39
ATPAF1-214ENST00000576409 FAIMQ9NVQ4 179 aa17.47■□□□□ 0.39
ATPAF1-214ENST00000576409 FAM118AQ9NWS6 357 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms