RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 SHQ1Q6PI26 577 aaKnown RBP18.62■□□□□ 0.57
SCARF1-206ENST00000573852 ZNF551Q7Z340 670 aaPredicted RBP18.62■□□□□ 0.57
SCARF1-206ENST00000573852 ZDHHC21Q8IVQ6 265 aa18.62■□□□□ 0.57
SCARF1-206ENST00000573852 RORBQ92753 470 aa18.62■□□□□ 0.57
SCARF1-206ENST00000573852 USP7Q93009 1102 aa18.62■□□□□ 0.57
SCARF1-206ENST00000573852 NTMT1Q9BV86 223 aa18.62■□□□□ 0.57
SCARF1-206ENST00000573852 TRPS1Q9UHF7 1281 aa18.62■□□□□ 0.57
SCARF1-206ENST00000573852 AP3M1Q9Y2T2 418 aa18.62■□□□□ 0.57
SCARF1-206ENST00000573852 COCHO43405 550 aa18.61■□□□□ 0.57
SCARF1-206ENST00000573852 C1QCP02747 245 aa18.61■□□□□ 0.57
SCARF1-206ENST00000573852 EBLN1P0CF75 366 aa18.61■□□□□ 0.57
SCARF1-206ENST00000573852 IL1RNP18510 177 aa18.61■□□□□ 0.57
SCARF1-206ENST00000573852 FUT4P22083 530 aa18.61■□□□□ 0.57
SCARF1-206ENST00000573852 DGKAP23743 735 aa18.61■□□□□ 0.57
SCARF1-206ENST00000573852 CLK3P49761 638 aaKnown RBP18.61■□□□□ 0.57
SCARF1-206ENST00000573852 FAM189BP81408 668 aa18.61■□□□□ 0.57
SCARF1-206ENST00000573852 GBX1Q14549 363 aa18.61■□□□□ 0.57
SCARF1-206ENST00000573852 ACOX1Q15067 660 aa18.61■□□□□ 0.57
SCARF1-206ENST00000573852 RNF165Q6ZSG1 346 aa18.61■□□□□ 0.57
SCARF1-206ENST00000573852 ULK4Q96C45 1275 aa18.61■□□□□ 0.57
SCARF1-206ENST00000573852 RHNO1Q9BSD3 238 aa18.61■□□□□ 0.57
SCARF1-206ENST00000573852 ACPTQ9BZG2 426 aa18.61■□□□□ 0.57
SCARF1-206ENST00000573852 WDR12Q9GZL7 423 aaKnown RBP18.61■□□□□ 0.57
SCARF1-206ENST00000573852 KCNH6Q9H252 994 aa18.61■□□□□ 0.57
SCARF1-206ENST00000573852 RIBC2Q9H4K1 309 aa18.61■□□□□ 0.57
SCARF1-206ENST00000573852 ASB8Q9H765 288 aa18.61■□□□□ 0.57
SCARF1-206ENST00000573852 ABCG2Q9UNQ0 655 aa18.61■□□□□ 0.57
SCARF1-206ENST00000573852 FCF1Q9Y324 198 aaKnown RBP18.61■□□□□ 0.57
SCARF1-206ENST00000573852 PMF1-BGLAPU3KQ54 211 aa18.61■□□□□ 0.57
SCARF1-206ENST00000573852 PIKFYVEQ9Y2I7 2098 aa18.61■□□□□ 0.57
SCARF1-206ENST00000573852 A0A096LPI6 279 aa18.61■□□□□ 0.57
SCARF1-206ENST00000573852 PER2O15055 1255 aa18.61■□□□□ 0.57
SCARF1-206ENST00000573852 STC2O76061 302 aa18.61■□□□□ 0.57
SCARF1-206ENST00000573852 HOXB9P17482 250 aaPredicted RBP18.61■□□□□ 0.57
SCARF1-206ENST00000573852 RPS3P23396 243 aaKnown RBP eCLIP18.61■□□□□ 0.57
SCARF1-206ENST00000573852 DAPP51397 102 aa18.61■□□□□ 0.57
SCARF1-206ENST00000573852 VBP1P61758 197 aa18.61■□□□□ 0.57
SCARF1-206ENST00000573852 IL1RL1Q01638 556 aa18.61■□□□□ 0.57
SCARF1-206ENST00000573852 SLC14A1Q13336 389 aa18.61■□□□□ 0.57
SCARF1-206ENST00000573852 NCCRP1Q6ZVX7 275 aaPredicted RBP18.61■□□□□ 0.57
SCARF1-206ENST00000573852 ZNF513Q8N8E2 541 aaPredicted RBP18.61■□□□□ 0.57
SCARF1-206ENST00000573852 TTLL2Q9BWV7 592 aa18.61■□□□□ 0.57
SCARF1-206ENST00000573852 ATP13A3Q9H7F0 1226 aa18.61■□□□□ 0.57
SCARF1-206ENST00000573852 ALDH2P05091 517 aa18.6■□□□□ 0.57
SCARF1-206ENST00000573852 IRF1P10914 325 aa18.6■□□□□ 0.57
SCARF1-206ENST00000573852 EPB42P16452 691 aa18.6■□□□□ 0.57
SCARF1-206ENST00000573852 MZF1P28698 734 aaPredicted RBP18.6■□□□□ 0.57
SCARF1-206ENST00000573852 MAGEA2P43356 314 aa18.6■□□□□ 0.57
SCARF1-206ENST00000573852 MASP1P48740 699 aa18.6■□□□□ 0.57
SCARF1-206ENST00000573852 RPS14P62263 151 aaKnown RBP18.6■□□□□ 0.57
SCARF1-206ENST00000573852 SLC35A2P78381 396 aa18.6■□□□□ 0.57
SCARF1-206ENST00000573852 CPSF6Q16630 551 aaKnown RBP eCLIP18.6■□□□□ 0.57
SCARF1-206ENST00000573852 CHST9Q7L1S5 443 aa18.6■□□□□ 0.57
SCARF1-206ENST00000573852 MFSD4AQ8N468 514 aa18.6■□□□□ 0.57
SCARF1-206ENST00000573852 ZBTB2Q8N680 514 aa18.6■□□□□ 0.57
SCARF1-206ENST00000573852 GLMNQ92990 594 aa18.6■□□□□ 0.57
SCARF1-206ENST00000573852 YIPF6Q96EC8 236 aa18.6■□□□□ 0.57
SCARF1-206ENST00000573852 CEP295NLQ96MC4 621 aa18.6■□□□□ 0.57
SCARF1-206ENST00000573852 DUSP21Q9H596 190 aa18.6■□□□□ 0.57
SCARF1-206ENST00000573852 MAN2B2Q9Y2E5 1009 aa18.6■□□□□ 0.57
SCARF1-206ENST00000573852 M0R3G1 203 aa18.6■□□□□ 0.57
SCARF1-206ENST00000573852 SLC22A1O15245 554 aa18.6■□□□□ 0.57
SCARF1-206ENST00000573852 NADKO95544 446 aaPredicted RBP18.6■□□□□ 0.57
SCARF1-206ENST00000573852 TACR1P25103 407 aa18.6■□□□□ 0.57
SCARF1-206ENST00000573852 S100A3P33764 101 aa18.6■□□□□ 0.57
SCARF1-206ENST00000573852 HALP42357 657 aa18.6■□□□□ 0.57
SCARF1-206ENST00000573852 HUNKP57058 714 aa18.6■□□□□ 0.57
SCARF1-206ENST00000573852 GPRC6AQ5T6X5 926 aa18.6■□□□□ 0.57
SCARF1-206ENST00000573852 RBFAQ8N0V3 343 aa18.6■□□□□ 0.57
SCARF1-206ENST00000573852 REXO5Q96IC2 774 aaKnown RBP18.6■□□□□ 0.57
SCARF1-206ENST00000573852 PCDH12Q9NPG4 1184 aa18.6■□□□□ 0.57
SCARF1-206ENST00000573852 MARCH5Q9NX47 278 aa18.6■□□□□ 0.57
SCARF1-206ENST00000573852 DNMT3BQ9UBC3 853 aaKnown RBP18.6■□□□□ 0.57
SCARF1-206ENST00000573852 NUP214P35658 2090 aaPredicted RBP18.6■□□□□ 0.57
SCARF1-206ENST00000573852 NT5C1B-RDH14C9J2C7 533 aa18.59■□□□□ 0.57
SCARF1-206ENST00000573852 SEPT4O43236 478 aa18.59■□□□□ 0.57
SCARF1-206ENST00000573852 ZNF682O95780 498 aa18.59■□□□□ 0.57
SCARF1-206ENST00000573852 PDYNP01213 254 aa18.59■□□□□ 0.57
SCARF1-206ENST00000573852 CKBP12277 381 aa18.59■□□□□ 0.57
SCARF1-206ENST00000573852 JUNDP17535 347 aa18.59■□□□□ 0.57
SCARF1-206ENST00000573852 GATMP50440 423 aa18.59■□□□□ 0.57
SCARF1-206ENST00000573852 RPS3AP61247 264 aaKnown RBP18.59■□□□□ 0.57
SCARF1-206ENST00000573852 RHOAP61586 193 aa18.59■□□□□ 0.57
SCARF1-206ENST00000573852 GTF2H3Q13889 308 aa18.59■□□□□ 0.57
SCARF1-206ENST00000573852 SMN1Q16637 294 aaKnown RBP18.59■□□□□ 0.57
SCARF1-206ENST00000573852 PAGE2BQ5JRK9 111 aa18.59■□□□□ 0.57
SCARF1-206ENST00000573852 TMEM236Q5W0B7 351 aa18.59■□□□□ 0.57
SCARF1-206ENST00000573852 CCDC81Q6ZN84 652 aa18.59■□□□□ 0.57
SCARF1-206ENST00000573852 TAS1R1Q7RTX1 841 aa18.59■□□□□ 0.57
SCARF1-206ENST00000573852 TMEM132CQ8N3T6 1108 aa18.59■□□□□ 0.57
SCARF1-206ENST00000573852 OR6K2Q8NGY2 324 aa18.59■□□□□ 0.57
SCARF1-206ENST00000573852 UBTD2Q8WUN7 234 aa18.59■□□□□ 0.57
SCARF1-206ENST00000573852 PIH1D2Q8WWB5 315 aa18.59■□□□□ 0.57
SCARF1-206ENST00000573852 ITPKCQ96DU7 683 aa18.59■□□□□ 0.57
SCARF1-206ENST00000573852 ERLEC1Q96DZ1 483 aa18.59■□□□□ 0.57
SCARF1-206ENST00000573852 PARVBQ9HBI1 364 aa18.59■□□□□ 0.57
SCARF1-206ENST00000573852 GPRC5BQ9NZH0 403 aa18.59■□□□□ 0.57
SCARF1-206ENST00000573852 PPT2Q9UMR5 302 aa18.59■□□□□ 0.57
SCARF1-206ENST00000573852 SCAMP3O14828 347 aaKnown RBP18.59■□□□□ 0.57
SCARF1-206ENST00000573852 DIRAS1O95057 198 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms