RNA–Protein interactions for RNA: ENST00000573577.5

RPAIN-213, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-213ENST00000573577 DDA1Q9BW61 102 aa13.12□□□□□ -0.31
RPAIN-213ENST00000573577 SLC39A1Q9NY26 324 aa13.12□□□□□ -0.31
RPAIN-213ENST00000573577 LNPEPQ9UIQ6 1025 aa13.12□□□□□ -0.31
RPAIN-213ENST00000573577 LHX6Q9UPM6 363 aa13.12□□□□□ -0.31
RPAIN-213ENST00000573577 PCDHGA3Q9Y5H0 932 aa13.12□□□□□ -0.31
RPAIN-213ENST00000573577 NFS1Q9Y697 457 aa13.12□□□□□ -0.31
RPAIN-213ENST00000573577 ZNF839A8K0R7 811 aa13.11□□□□□ -0.31
RPAIN-213ENST00000573577 RIPK2O43353 540 aa13.11□□□□□ -0.31
RPAIN-213ENST00000573577 KIF1CO43896 1103 aaKnown RBP13.11□□□□□ -0.31
RPAIN-213ENST00000573577 RASSF9O75901 435 aa13.11□□□□□ -0.31
RPAIN-213ENST00000573577 MYBL2P10244 700 aa13.11□□□□□ -0.31
RPAIN-213ENST00000573577 STMN1P16949 149 aa13.11□□□□□ -0.31
RPAIN-213ENST00000573577 ZNF37AP17032 561 aaPredicted RBP13.11□□□□□ -0.31
RPAIN-213ENST00000573577 CYP2A7P20853 494 aa13.11□□□□□ -0.31
RPAIN-213ENST00000573577 CD82P27701 267 aa13.11□□□□□ -0.31
RPAIN-213ENST00000573577 HSD17B2P37059 387 aa13.11□□□□□ -0.31
RPAIN-213ENST00000573577 TAS2R39P59534 338 aa13.11□□□□□ -0.31
RPAIN-213ENST00000573577 MC2RQ01718 297 aa13.11□□□□□ -0.31
RPAIN-213ENST00000573577 CLN3Q13286 438 aa13.11□□□□□ -0.31
RPAIN-213ENST00000573577 EFTUD2Q15029 972 aaKnown RBP eCLIP13.11□□□□□ -0.31
RPAIN-213ENST00000573577 UAP1Q16222 522 aaPredicted RBP13.11□□□□□ -0.31
RPAIN-213ENST00000573577 BROXQ5VW32 411 aa13.11□□□□□ -0.31
RPAIN-213ENST00000573577 WDR93Q6P2C0 686 aa13.11□□□□□ -0.31
RPAIN-213ENST00000573577 FAM92BQ6ZTR7 304 aa13.11□□□□□ -0.31
RPAIN-213ENST00000573577 PIWIL4Q7Z3Z4 852 aaKnown RBP13.11□□□□□ -0.31
RPAIN-213ENST00000573577 CCDC91Q7Z6B0 441 aa13.11□□□□□ -0.31
RPAIN-213ENST00000573577 GSPT2Q8IYD1 628 aaKnown RBP13.11□□□□□ -0.31
RPAIN-213ENST00000573577 CARFQ8N187 725 aa13.11□□□□□ -0.31
RPAIN-213ENST00000573577 FBXO15Q8NCQ5 510 aaPredicted RBP13.11□□□□□ -0.31
RPAIN-213ENST00000573577 EEF1AKMT1Q8WVE0 214 aa13.11□□□□□ -0.31
RPAIN-213ENST00000573577 ASB11Q8WXH4 323 aa13.11□□□□□ -0.31
RPAIN-213ENST00000573577 PMEPA1Q969W9 287 aa13.11□□□□□ -0.31
RPAIN-213ENST00000573577 LINGO1Q96FE5 620 aa13.11□□□□□ -0.31
RPAIN-213ENST00000573577 PDLIM5Q96HC4 596 aaKnown RBP13.11□□□□□ -0.31
RPAIN-213ENST00000573577 CRELD1Q96HD1 420 aa13.11□□□□□ -0.31
RPAIN-213ENST00000573577 CCDC77Q9BR77 488 aa13.11□□□□□ -0.31
RPAIN-213ENST00000573577 TXLNGYQ9BZA5 131 aa13.11□□□□□ -0.31
RPAIN-213ENST00000573577 ASPSCR1Q9BZE9 553 aa13.11□□□□□ -0.31
RPAIN-213ENST00000573577 ZNF768Q9H5H4 540 aaKnown RBP13.11□□□□□ -0.31
RPAIN-213ENST00000573577 GPAMQ9HCL2 828 aa13.11□□□□□ -0.31
RPAIN-213ENST00000573577 SIDT1Q9NXL6 827 aaKnown RBP13.11□□□□□ -0.31
RPAIN-213ENST00000573577 SPATA7Q9P0W8 599 aa13.11□□□□□ -0.31
RPAIN-213ENST00000573577 ICKQ9UPZ9 632 aa13.11□□□□□ -0.31
RPAIN-213ENST00000573577 RUVBL2Q9Y230 463 aaKnown RBP13.11□□□□□ -0.31
RPAIN-213ENST00000573577 MTO1Q9Y2Z2 717 aaKnown RBP13.11□□□□□ -0.31
RPAIN-213ENST00000573577 EXOC1LA0A1B0GW35 172 aa13.1□□□□□ -0.31
RPAIN-213ENST00000573577 PIPSLA2A3N6 862 aa13.1□□□□□ -0.31
RPAIN-213ENST00000573577 GSAPA4D1B5 854 aa13.1□□□□□ -0.31
RPAIN-213ENST00000573577 TLCD2A6NGC4 264 aa13.1□□□□□ -0.31
RPAIN-213ENST00000573577 C2orf74A8MZ97 194 aa13.1□□□□□ -0.31
RPAIN-213ENST00000573577 GFYI3L273 518 aa13.1□□□□□ -0.31
RPAIN-213ENST00000573577 RASGRF2O14827 1237 aa13.1□□□□□ -0.31
RPAIN-213ENST00000573577 SLC16A5O15375 505 aa13.1□□□□□ -0.31
RPAIN-213ENST00000573577 KRT38O76015 456 aa13.1□□□□□ -0.31
RPAIN-213ENST00000573577 LIPCP11150 499 aa13.1□□□□□ -0.31
RPAIN-213ENST00000573577 POLR2CP19387 275 aaPredicted RBP13.1□□□□□ -0.31
RPAIN-213ENST00000573577 CNTFP26441 200 aa13.1□□□□□ -0.31
RPAIN-213ENST00000573577 PKLRP30613 574 aa13.1□□□□□ -0.31
RPAIN-213ENST00000573577 MSH2P43246 934 aa13.1□□□□□ -0.31
RPAIN-213ENST00000573577 BDKRB1P46663 353 aa13.1□□□□□ -0.31
RPAIN-213ENST00000573577 SERPINB9P50453 376 aa13.1□□□□□ -0.31
RPAIN-213ENST00000573577 UCNP55089 124 aa13.1□□□□□ -0.31
RPAIN-213ENST00000573577 RAB10P61026 200 aa13.1□□□□□ -0.31
RPAIN-213ENST00000573577 PPP1CAP62136 330 aa13.1□□□□□ -0.31
RPAIN-213ENST00000573577 VSNL1P62760 191 aa13.1□□□□□ -0.31
RPAIN-213ENST00000573577 ERCC6LQ2NKX8 1250 aa13.1□□□□□ -0.31
RPAIN-213ENST00000573577 DCAF12Q5T6F0 453 aa13.1□□□□□ -0.31
RPAIN-213ENST00000573577 LGSNQ5TDP6 509 aa13.1□□□□□ -0.31
RPAIN-213ENST00000573577 CACHD1Q5VU97 1274 aa13.1□□□□□ -0.31
RPAIN-213ENST00000573577 ANKS6Q68DC2 871 aa13.1□□□□□ -0.31
RPAIN-213ENST00000573577 CYHR1Q6ZMK1 362 aa13.1□□□□□ -0.31
RPAIN-213ENST00000573577 UBE2R2Q712K3 238 aaPredicted RBP13.1□□□□□ -0.31
RPAIN-213ENST00000573577 ZFAND4Q86XD8 727 aa13.1□□□□□ -0.31
RPAIN-213ENST00000573577 OR9A1PQ8NGU1 263 aa13.1□□□□□ -0.31
RPAIN-213ENST00000573577 MCOLN3Q8TDD5 553 aa13.1□□□□□ -0.31
RPAIN-213ENST00000573577 SLC44A1Q8WWI5 657 aa13.1□□□□□ -0.31
RPAIN-213ENST00000573577 KLHL6Q8WZ60 621 aa13.1□□□□□ -0.31
RPAIN-213ENST00000573577 ANKRD7Q92527 254 aa13.1□□□□□ -0.31
RPAIN-213ENST00000573577 SLC22A18Q96BI1 424 aa13.1□□□□□ -0.31
RPAIN-213ENST00000573577 MRRFQ96E11 262 aaKnown RBP13.1□□□□□ -0.31
RPAIN-213ENST00000573577 PAFAH2Q99487 392 aa13.1□□□□□ -0.31
RPAIN-213ENST00000573577 XKR8Q9H6D3 395 aa13.1□□□□□ -0.31
RPAIN-213ENST00000573577 FBXO8Q9NRD0 319 aa13.1□□□□□ -0.31
RPAIN-213ENST00000573577 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.1□□□□□ -0.31
RPAIN-213ENST00000573577 B3GALT1Q9Y5Z6 326 aa13.1□□□□□ -0.31
RPAIN-213ENST00000573577 V9GYY5 206 aaPredicted RBP13.1□□□□□ -0.31
RPAIN-213ENST00000573577 CHD6Q8TD26 2715 aa13.09□□□□□ -0.31
RPAIN-213ENST00000573577 ARHGEF33A8MVX0 844 aa13.09□□□□□ -0.31
RPAIN-213ENST00000573577 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.09□□□□□ -0.31
RPAIN-213ENST00000573577 POC1B-GALNT4F8VUJ3 575 aa13.09□□□□□ -0.31
RPAIN-213ENST00000573577 STMND1H3BQB6 276 aa13.09□□□□□ -0.31
RPAIN-213ENST00000573577 MYO1CO00159 1063 aa13.09□□□□□ -0.31
RPAIN-213ENST00000573577 BTN3A3O00478 584 aa13.09□□□□□ -0.31
RPAIN-213ENST00000573577 BTN3A1O00481 513 aa13.09□□□□□ -0.31
RPAIN-213ENST00000573577 MAP3K7O43318 606 aa13.09□□□□□ -0.31
RPAIN-213ENST00000573577 FAM155BO75949 473 aa13.09□□□□□ -0.31
RPAIN-213ENST00000573577 CHRM5P08912 532 aaPredicted RBP13.09□□□□□ -0.31
RPAIN-213ENST00000573577 HIST1H2AGP0C0S8 130 aaPredicted RBP13.09□□□□□ -0.31
RPAIN-213ENST00000573577 HIST1H2ADP20671 130 aa13.09□□□□□ -0.31
RPAIN-213ENST00000573577 CRABP2P29373 138 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms