RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 TSSK1BQ9BXA7 367 aa13.39□□□□□ -0.27
RPAIN-209ENST00000571558 MRPL40Q9NQ50 206 aaKnown RBP13.39□□□□□ -0.27
RPAIN-209ENST00000571558 PCMTD2Q9NV79 361 aa13.39□□□□□ -0.27
RPAIN-209ENST00000571558 SIRPGQ9P1W8 387 aa13.39□□□□□ -0.27
RPAIN-209ENST00000571558 SLC23A2Q9UGH3 650 aa13.39□□□□□ -0.27
RPAIN-209ENST00000571558 TRMT6Q9UJA5 497 aaKnown RBP13.39□□□□□ -0.27
RPAIN-209ENST00000571558 TLK1Q9UKI8 766 aa13.39□□□□□ -0.27
RPAIN-209ENST00000571558 SUFUQ9UMX1 484 aa13.39□□□□□ -0.27
RPAIN-209ENST00000571558 ACOT9Q9Y305 439 aa13.39□□□□□ -0.27
RPAIN-209ENST00000571558 PRKAB1Q9Y478 270 aa13.39□□□□□ -0.27
RPAIN-209ENST00000571558 PCDHGA3Q9Y5H0 932 aa13.39□□□□□ -0.27
RPAIN-209ENST00000571558 DNMT3AQ9Y6K1 912 aaPredicted RBP13.39□□□□□ -0.27
RPAIN-209ENST00000571558 UTP20O75691 2785 aaKnown RBP13.39□□□□□ -0.27
RPAIN-209ENST00000571558 KMOO15229 486 aa13.39□□□□□ -0.27
RPAIN-209ENST00000571558 ZW10O43264 779 aa13.39□□□□□ -0.27
RPAIN-209ENST00000571558 GRID2O43424 1007 aa13.39□□□□□ -0.27
RPAIN-209ENST00000571558 NUDT21O43809 227 aaKnown RBP13.39□□□□□ -0.27
RPAIN-209ENST00000571558 GPC4O75487 556 aa13.39□□□□□ -0.27
RPAIN-209ENST00000571558 POP7O75817 140 aaKnown RBP13.39□□□□□ -0.27
RPAIN-209ENST00000571558 COL6A2P12110 1019 aa13.39□□□□□ -0.27
RPAIN-209ENST00000571558 POLE2P56282 527 aa13.39□□□□□ -0.27
RPAIN-209ENST00000571558 ALG11Q2TAA5 492 aa13.39□□□□□ -0.27
RPAIN-209ENST00000571558 UGT3A1Q6NUS8 523 aa13.39□□□□□ -0.27
RPAIN-209ENST00000571558 CRTC3Q6UUV7 619 aa13.39□□□□□ -0.27
RPAIN-209ENST00000571558 ENPP7Q6UWV6 458 aa13.39□□□□□ -0.27
RPAIN-209ENST00000571558 NAPRTQ6XQN6 538 aa13.39□□□□□ -0.27
RPAIN-209ENST00000571558 RAPH1Q70E73 1250 aa13.39□□□□□ -0.27
RPAIN-209ENST00000571558 PTRH1Q86Y79 214 aaKnown RBP13.39□□□□□ -0.27
RPAIN-209ENST00000571558 SLITRK4Q8IW52 837 aa13.39□□□□□ -0.27
RPAIN-209ENST00000571558 PLD6Q8N2A8 252 aaKnown RBP13.39□□□□□ -0.27
RPAIN-209ENST00000571558 ZBTB2Q8N680 514 aa13.39□□□□□ -0.27
RPAIN-209ENST00000571558 OR2L2Q8NH16 312 aa13.39□□□□□ -0.27
RPAIN-209ENST00000571558 KCTD4Q8WVF5 259 aa13.39□□□□□ -0.27
RPAIN-209ENST00000571558 ALKBH8Q96BT7 664 aaKnown RBP13.39□□□□□ -0.27
RPAIN-209ENST00000571558 PDLIM5Q96HC4 596 aaKnown RBP13.39□□□□□ -0.27
RPAIN-209ENST00000571558 APOPT1Q96IL0 206 aa13.39□□□□□ -0.27
RPAIN-209ENST00000571558 SMC6Q96SB8 1091 aa13.39□□□□□ -0.27
RPAIN-209ENST00000571558 VPS11Q9H270 941 aa13.39□□□□□ -0.27
RPAIN-209ENST00000571558 SARS2Q9NP81 518 aaKnown RBP13.39□□□□□ -0.27
RPAIN-209ENST00000571558 FOXJ2Q9P0K8 574 aa13.39□□□□□ -0.27
RPAIN-209ENST00000571558 ST14Q9Y5Y6 855 aa13.39□□□□□ -0.27
RPAIN-209ENST00000571558 DGKBQ9Y6T7 804 aa13.39□□□□□ -0.27
RPAIN-209ENST00000571558 RNF215Q9Y6U7 377 aa13.39□□□□□ -0.27
RPAIN-209ENST00000571558 NBASA2RRP1 2371 aa13.38□□□□□ -0.27
RPAIN-209ENST00000571558 SLC5A10A0PJK1 596 aa13.38□□□□□ -0.27
RPAIN-209ENST00000571558 MGAT4DA6NG13 374 aa13.38□□□□□ -0.27
RPAIN-209ENST00000571558 HGSO14964 777 aaPredicted RBP13.38□□□□□ -0.27
RPAIN-209ENST00000571558 KPNA5O15131 536 aa13.38□□□□□ -0.27
RPAIN-209ENST00000571558 PRPF4O43172 522 aaKnown RBP eCLIP13.38□□□□□ -0.27
RPAIN-209ENST00000571558 SLCO2B1O94956 709 aa13.38□□□□□ -0.27
RPAIN-209ENST00000571558 KLHL2O95198 593 aa13.38□□□□□ -0.27
RPAIN-209ENST00000571558 CELA2BP08218 269 aaPredicted RBP13.38□□□□□ -0.27
RPAIN-209ENST00000571558 GSTA1P08263 222 aa13.38□□□□□ -0.27
RPAIN-209ENST00000571558 CCDC166P0CW27 439 aa13.38□□□□□ -0.27
RPAIN-209ENST00000571558 BRAFP15056 766 aa13.38□□□□□ -0.27
RPAIN-209ENST00000571558 CRHR1P34998 444 aa13.38□□□□□ -0.27
RPAIN-209ENST00000571558 ETV5P41161 510 aa13.38□□□□□ -0.27
RPAIN-209ENST00000571558 MAPK10P53779 464 aa13.38□□□□□ -0.27
RPAIN-209ENST00000571558 SRP54P61011 504 aaKnown RBP13.38□□□□□ -0.27
RPAIN-209ENST00000571558 DMPKQ09013 629 aa13.38□□□□□ -0.27
RPAIN-209ENST00000571558 GPS2Q13227 327 aa13.38□□□□□ -0.27
RPAIN-209ENST00000571558 MPP2Q14168 576 aa13.38□□□□□ -0.27
RPAIN-209ENST00000571558 HSP90B2PQ58FF3 399 aa13.38□□□□□ -0.27
RPAIN-209ENST00000571558 ACSBG2Q5FVE4 666 aa13.38□□□□□ -0.27
RPAIN-209ENST00000571558 PLEKHS1Q5SXH7 462 aa13.38□□□□□ -0.27
RPAIN-209ENST00000571558 CDHR3Q6ZTQ4 885 aa13.38□□□□□ -0.27
RPAIN-209ENST00000571558 OTOAQ7RTW8 1153 aa13.38□□□□□ -0.27
RPAIN-209ENST00000571558 SPRED1Q7Z699 444 aa13.38□□□□□ -0.27
RPAIN-209ENST00000571558 LCA5Q86VQ0 697 aa13.38□□□□□ -0.27
RPAIN-209ENST00000571558 VRK3Q8IV63 474 aa13.38□□□□□ -0.27
RPAIN-209ENST00000571558 CPNE9Q8IYJ1 553 aa13.38□□□□□ -0.27
RPAIN-209ENST00000571558 LILRA3Q8N6C8 439 aaPredicted RBP13.38□□□□□ -0.27
RPAIN-209ENST00000571558 EEF1AKMT1Q8WVE0 214 aa13.38□□□□□ -0.27
RPAIN-209ENST00000571558 ELMO1Q92556 727 aa13.38□□□□□ -0.27
RPAIN-209ENST00000571558 NKD1Q969G9 470 aa13.38□□□□□ -0.27
RPAIN-209ENST00000571558 TSACCQ96A04 125 aaPredicted RBP13.38□□□□□ -0.27
RPAIN-209ENST00000571558 TIMM29Q9BSF4 260 aa13.38□□□□□ -0.27
RPAIN-209ENST00000571558 KLQ9UEF7 1012 aa13.38□□□□□ -0.27
RPAIN-209ENST00000571558 ZNHIT2Q9UHR6 403 aa13.38□□□□□ -0.27
RPAIN-209ENST00000571558 PIKFYVEQ9Y2I7 2098 aa13.37□□□□□ -0.27
RPAIN-209ENST00000571558 KLHL33A6NCF5 533 aa13.37□□□□□ -0.27
RPAIN-209ENST00000571558 EIF3FO00303 357 aaPredicted RBP13.37□□□□□ -0.27
RPAIN-209ENST00000571558 LIN7AO14910 233 aaPredicted RBP13.37□□□□□ -0.27
RPAIN-209ENST00000571558 SPAG7O75391 227 aa13.37□□□□□ -0.27
RPAIN-209ENST00000571558 CPNE6O95741 557 aa13.37□□□□□ -0.27
RPAIN-209ENST00000571558 TNFP01375 233 aa13.37□□□□□ -0.27
RPAIN-209ENST00000571558 CBSLP0DN79 551 aa13.37□□□□□ -0.27
RPAIN-209ENST00000571558 CBSP35520 551 aa13.37□□□□□ -0.27
RPAIN-209ENST00000571558 SLC18A1P54219 525 aa13.37□□□□□ -0.27
RPAIN-209ENST00000571558 IL2P60568 153 aa13.37□□□□□ -0.27
RPAIN-209ENST00000571558 INSCQ1MX18 579 aa13.37□□□□□ -0.27
RPAIN-209ENST00000571558 CYHR1Q6ZMK1 362 aa13.37□□□□□ -0.27
RPAIN-209ENST00000571558 FAM83HQ6ZRV2 1179 aaPredicted RBP13.37□□□□□ -0.27
RPAIN-209ENST00000571558 TBC1D1Q86TI0 1168 aaPredicted RBP13.37□□□□□ -0.27
RPAIN-209ENST00000571558 AMZ2Q86W34 360 aa13.37□□□□□ -0.27
RPAIN-209ENST00000571558 GALNT13Q8IUC8 556 aa13.37□□□□□ -0.27
RPAIN-209ENST00000571558 RASGRP3Q8IV61 690 aa13.37□□□□□ -0.27
RPAIN-209ENST00000571558 SPATA6LQ8N4H0 392 aa13.37□□□□□ -0.27
RPAIN-209ENST00000571558 NKAPQ8N5F7 415 aaKnown RBP13.37□□□□□ -0.27
RPAIN-209ENST00000571558 HM13Q8TCT9 377 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms