RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 RASSF9O75901 435 aa6.75□□□□□ -1.33
SMG6-209ENST00000571442 EBLN1P0CF75 366 aa6.75□□□□□ -1.33
SMG6-209ENST00000571442 ERGP11308 486 aa6.75□□□□□ -1.33
SMG6-209ENST00000571442 ZNF37AP17032 561 aaPredicted RBP6.75□□□□□ -1.33
SMG6-209ENST00000571442 NELFEP18615 380 aaKnown RBP6.75□□□□□ -1.33
SMG6-209ENST00000571442 CD9P21926 228 aa6.75□□□□□ -1.33
SMG6-209ENST00000571442 IMPA1P29218 277 aa6.75□□□□□ -1.33
SMG6-209ENST00000571442 SLC5A2P31639 672 aa6.75□□□□□ -1.33
SMG6-209ENST00000571442 SHMT2P34897 504 aa6.75□□□□□ -1.33
SMG6-209ENST00000571442 GP5P40197 560 aa6.75□□□□□ -1.33
SMG6-209ENST00000571442 GABRA4P48169 554 aa6.75□□□□□ -1.33
SMG6-209ENST00000571442 CSRP3P50461 194 aa6.75□□□□□ -1.33
SMG6-209ENST00000571442 RAB28P51157 221 aa6.75□□□□□ -1.33
SMG6-209ENST00000571442 VSNL1P62760 191 aa6.75□□□□□ -1.33
SMG6-209ENST00000571442 MC2RQ01718 297 aa6.75□□□□□ -1.33
SMG6-209ENST00000571442 DLG1Q12959 904 aa6.75□□□□□ -1.33
SMG6-209ENST00000571442 BMPR2Q13873 1038 aa6.75□□□□□ -1.33
SMG6-209ENST00000571442 TGIF1Q15583 401 aa6.75□□□□□ -1.33
SMG6-209ENST00000571442 ZKSCAN8Q15776 578 aaPredicted RBP6.75□□□□□ -1.33
SMG6-209ENST00000571442 DEFB110Q30KQ9 67 aa6.75□□□□□ -1.33
SMG6-209ENST00000571442 KIAA1614Q5VZ46 1190 aa6.75□□□□□ -1.33
SMG6-209ENST00000571442 ZNF449Q6P9G9 518 aa6.75□□□□□ -1.33
SMG6-209ENST00000571442 IGF2-ASQ6U949 168 aa6.75□□□□□ -1.33
SMG6-209ENST00000571442 SPESP1Q6UW49 350 aa6.75□□□□□ -1.33
SMG6-209ENST00000571442 SUSD1Q6UWL2 747 aa6.75□□□□□ -1.33
SMG6-209ENST00000571442 SBSNQ6UWP8 590 aa6.75□□□□□ -1.33
SMG6-209ENST00000571442 NEK10Q6ZWH5 1172 aa6.75□□□□□ -1.33
SMG6-209ENST00000571442 CMC1Q7Z7K0 106 aa6.75□□□□□ -1.33
SMG6-209ENST00000571442 CLEC14AQ86T13 490 aa6.75□□□□□ -1.33
SMG6-209ENST00000571442 ZFAND4Q86XD8 727 aa6.75□□□□□ -1.33
SMG6-209ENST00000571442 FAM129CQ86XR2 697 aa6.75□□□□□ -1.33
SMG6-209ENST00000571442 AGBL5Q8NDL9 886 aa6.75□□□□□ -1.33
SMG6-209ENST00000571442 OR9A1PQ8NGU1 263 aa6.75□□□□□ -1.33
SMG6-209ENST00000571442 OR2L8Q8NGY9 312 aa6.75□□□□□ -1.33
SMG6-209ENST00000571442 ZNF480Q8WV37 535 aa6.75□□□□□ -1.33
SMG6-209ENST00000571442 GRAMD1AQ96CP6 724 aa6.75□□□□□ -1.33
SMG6-209ENST00000571442 CRELD1Q96HD1 420 aa6.75□□□□□ -1.33
SMG6-209ENST00000571442 NAF1Q96HR8 494 aaKnown RBP6.75□□□□□ -1.33
SMG6-209ENST00000571442 TRAPPC9Q96Q05 1148 aa6.75□□□□□ -1.33
SMG6-209ENST00000571442 GPR22Q99680 433 aa6.75□□□□□ -1.33
SMG6-209ENST00000571442 CMKLR1Q99788 373 aa6.75□□□□□ -1.33
SMG6-209ENST00000571442 CPNE1Q99829 537 aa6.75□□□□□ -1.33
SMG6-209ENST00000571442 DPYSL5Q9BPU6 564 aa6.75□□□□□ -1.33
SMG6-209ENST00000571442 PITPNM3Q9BZ71 974 aa6.75□□□□□ -1.33
SMG6-209ENST00000571442 SPRY4Q9C004 299 aa6.75□□□□□ -1.33
SMG6-209ENST00000571442 STRADBQ9C0K7 418 aa6.75□□□□□ -1.33
SMG6-209ENST00000571442 ACSS3Q9H6R3 686 aa6.75□□□□□ -1.33
SMG6-209ENST00000571442 TAS2R13Q9NYV9 303 aa6.75□□□□□ -1.33
SMG6-209ENST00000571442 DKK4Q9UBT3 224 aa6.75□□□□□ -1.33
SMG6-209ENST00000571442 MTRF1LQ9UGC7 380 aaKnown RBP6.75□□□□□ -1.33
SMG6-209ENST00000571442 POLG2Q9UHN1 485 aa6.75□□□□□ -1.33
SMG6-209ENST00000571442 SLC39A10Q9ULF5 831 aa6.75□□□□□ -1.33
SMG6-209ENST00000571442 PDE10AQ9Y233 779 aa6.75□□□□□ -1.33
SMG6-209ENST00000571442 AHCTF1Q8WYP5 2266 aa6.75□□□□□ -1.33
SMG6-209ENST00000571442 MDC1Q14676 2089 aaKnown RBP6.74□□□□□ -1.33
SMG6-209ENST00000571442 IGKV1-8A0A0C4DH67 115 aa6.74□□□□□ -1.33
SMG6-209ENST00000571442 NPEPPSL1A6NEC2 478 aa6.74□□□□□ -1.33
SMG6-209ENST00000571442 C2orf74A8MZ97 194 aa6.74□□□□□ -1.33
SMG6-209ENST00000571442 ISM1B1AKI9 464 aa6.74□□□□□ -1.33
SMG6-209ENST00000571442 B4E171 279 aa6.74□□□□□ -1.33
SMG6-209ENST00000571442 H3BMH7 237 aa6.74□□□□□ -1.33
SMG6-209ENST00000571442 TMX2-CTNND1H3BSU7 103 aa6.74□□□□□ -1.33
SMG6-209ENST00000571442 ZW10O43264 779 aa6.74□□□□□ -1.33
SMG6-209ENST00000571442 RIPK2O43353 540 aa6.74□□□□□ -1.33
SMG6-209ENST00000571442 SLC16A8O95907 504 aa6.74□□□□□ -1.33
SMG6-209ENST00000571442 ITGA2BP08514 1039 aa6.74□□□□□ -1.33
SMG6-209ENST00000571442 JMJD7P0C870 316 aa6.74□□□□□ -1.33
SMG6-209ENST00000571442 CBSLP0DN79 551 aa6.74□□□□□ -1.33
SMG6-209ENST00000571442 ENO3P13929 434 aaPredicted RBP6.74□□□□□ -1.33
SMG6-209ENST00000571442 WT1P19544 449 aaPredicted RBP6.74□□□□□ -1.33
SMG6-209ENST00000571442 MAGP20916 626 aa6.74□□□□□ -1.33
SMG6-209ENST00000571442 CDH3P22223 829 aa6.74□□□□□ -1.33
SMG6-209ENST00000571442 ITPKBP27987 946 aa6.74□□□□□ -1.33
SMG6-209ENST00000571442 STX2P32856 288 aa6.74□□□□□ -1.33
SMG6-209ENST00000571442 CSTF2P33240 577 aaKnown RBP eCLIP6.74□□□□□ -1.33
SMG6-209ENST00000571442 CBSP35520 551 aa6.74□□□□□ -1.33
SMG6-209ENST00000571442 EIF2S3P41091 472 aaKnown RBP6.74□□□□□ -1.33
SMG6-209ENST00000571442 TSPAN7P41732 249 aa6.74□□□□□ -1.33
SMG6-209ENST00000571442 SKIV2L2P42285 1042 aaKnown RBP6.74□□□□□ -1.33
SMG6-209ENST00000571442 KCNC1P48547 511 aa6.74□□□□□ -1.33
SMG6-209ENST00000571442 SNRPNP63162 240 aaKnown RBP6.74□□□□□ -1.33
SMG6-209ENST00000571442 IRF9Q00978 393 aa6.74□□□□□ -1.33
SMG6-209ENST00000571442 CLN3Q13286 438 aa6.74□□□□□ -1.33
SMG6-209ENST00000571442 EIF3IQ13347 325 aaKnown RBP6.74□□□□□ -1.33
SMG6-209ENST00000571442 PDAP1Q13442 181 aaKnown RBP6.74□□□□□ -1.33
SMG6-209ENST00000571442 GPR19Q15760 415 aa6.74□□□□□ -1.33
SMG6-209ENST00000571442 UAP1Q16222 522 aaPredicted RBP6.74□□□□□ -1.33
SMG6-209ENST00000571442 CYP2A13Q16696 494 aa6.74□□□□□ -1.33
SMG6-209ENST00000571442 PPP1R3AQ16821 1122 aa6.74□□□□□ -1.33
SMG6-209ENST00000571442 C18orf21Q32NC0 220 aaPredicted RBP6.74□□□□□ -1.33
SMG6-209ENST00000571442 TTLL9Q3SXZ7 439 aa6.74□□□□□ -1.33
SMG6-209ENST00000571442 FCRL6Q6DN72 434 aa6.74□□□□□ -1.33
SMG6-209ENST00000571442 C19orf48Q6RUI8 117 aa6.74□□□□□ -1.33
SMG6-209ENST00000571442 CDHR3Q6ZTQ4 885 aa6.74□□□□□ -1.33
SMG6-209ENST00000571442 UBE2R2Q712K3 238 aaPredicted RBP6.74□□□□□ -1.33
SMG6-209ENST00000571442 TIPARPQ7Z3E1 657 aaKnown RBP6.74□□□□□ -1.33
SMG6-209ENST00000571442 IFT20Q8IY31 132 aa6.74□□□□□ -1.33
SMG6-209ENST00000571442 D2HGDHQ8N465 521 aa6.74□□□□□ -1.33
SMG6-209ENST00000571442 FBXO15Q8NCQ5 510 aaPredicted RBP6.74□□□□□ -1.33
SMG6-209ENST00000571442 OR2A1Q8NGT9 310 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms