RNA–Protein interactions for RNA: ENST00000569020.5

CNOT1-215, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-215ENST00000569020 MAGP20916 626 aa13.14□□□□□ -0.31
CNOT1-215ENST00000569020 CD9P21926 228 aa13.14□□□□□ -0.31
CNOT1-215ENST00000569020 ADRA1DP25100 572 aa13.14□□□□□ -0.31
CNOT1-215ENST00000569020 PEBP1P30086 187 aaKnown RBP13.14□□□□□ -0.31
CNOT1-215ENST00000569020 PKLRP30613 574 aa13.14□□□□□ -0.31
CNOT1-215ENST00000569020 CCR7P32248 378 aa13.14□□□□□ -0.31
CNOT1-215ENST00000569020 PLEKHN1Q494U1 663 aaPredicted RBP13.14□□□□□ -0.31
CNOT1-215ENST00000569020 SEL1L2Q5TEA6 688 aa13.14□□□□□ -0.31
CNOT1-215ENST00000569020 IGFL3Q6UXB1 125 aa13.14□□□□□ -0.31
CNOT1-215ENST00000569020 NLRP9Q7RTR0 991 aa13.14□□□□□ -0.31
CNOT1-215ENST00000569020 ZADH2Q8N4Q0 377 aa13.14□□□□□ -0.31
CNOT1-215ENST00000569020 OR6P1Q8NGX9 317 aa13.14□□□□□ -0.31
CNOT1-215ENST00000569020 ASZ1Q8WWH4 475 aa13.14□□□□□ -0.31
CNOT1-215ENST00000569020 NACC2Q96BF6 587 aa13.14□□□□□ -0.31
CNOT1-215ENST00000569020 SNRNP40Q96DI7 357 aaKnown RBP13.14□□□□□ -0.31
CNOT1-215ENST00000569020 BAG1Q99933 345 aaPredicted RBP13.14□□□□□ -0.31
CNOT1-215ENST00000569020 CARD6Q9BX69 1037 aa13.14□□□□□ -0.31
CNOT1-215ENST00000569020 ILKAPQ9H0C8 392 aaPredicted RBP13.14□□□□□ -0.31
CNOT1-215ENST00000569020 ZNF552Q9H707 407 aaPredicted RBP13.14□□□□□ -0.31
CNOT1-215ENST00000569020 ETNK1Q9HBU6 452 aa13.14□□□□□ -0.31
CNOT1-215ENST00000569020 ATP13A2Q9NQ11 1180 aa13.14□□□□□ -0.31
CNOT1-215ENST00000569020 INTS7Q9NVH2 962 aaKnown RBP13.14□□□□□ -0.31
CNOT1-215ENST00000569020 EURLQ9NYK6 297 aa13.14□□□□□ -0.31
CNOT1-215ENST00000569020 SLC2A6Q9UGQ3 507 aa13.14□□□□□ -0.31
CNOT1-215ENST00000569020 ICE1Q9Y2F5 2266 aa13.13□□□□□ -0.31
CNOT1-215ENST00000569020 AGPSO00116 658 aa13.13□□□□□ -0.31
CNOT1-215ENST00000569020 KRT86O43790 486 aa13.13□□□□□ -0.31
CNOT1-215ENST00000569020 S1PR4O95977 384 aa13.13□□□□□ -0.31
CNOT1-215ENST00000569020 IFNB1P01574 187 aa13.13□□□□□ -0.31
CNOT1-215ENST00000569020 SOX8P57073 446 aa13.13□□□□□ -0.31
CNOT1-215ENST00000569020 ACVR1Q04771 509 aa13.13□□□□□ -0.31
CNOT1-215ENST00000569020 ZC3H12BQ5HYM0 836 aaKnown RBP13.13□□□□□ -0.31
CNOT1-215ENST00000569020 AARS2Q5JTZ9 985 aaKnown RBP13.13□□□□□ -0.31
CNOT1-215ENST00000569020 HIST2H2BCQ6DN03 193 aa13.13□□□□□ -0.31
CNOT1-215ENST00000569020 TTC23LQ6PF05 361 aa13.13□□□□□ -0.31
CNOT1-215ENST00000569020 UNC5DQ6UXZ4 953 aa13.13□□□□□ -0.31
CNOT1-215ENST00000569020 TTLL10Q6ZVT0 673 aa13.13□□□□□ -0.31
CNOT1-215ENST00000569020 DCUN1D3Q8IWE4 304 aa13.13□□□□□ -0.31
CNOT1-215ENST00000569020 CFAP61Q8NHU2 1237 aa13.13□□□□□ -0.31
CNOT1-215ENST00000569020 ATG4AQ8WYN0 398 aa13.13□□□□□ -0.31
CNOT1-215ENST00000569020 PEX13Q92968 403 aa13.13□□□□□ -0.31
CNOT1-215ENST00000569020 C19orf60Q96EN9 201 aa13.13□□□□□ -0.31
CNOT1-215ENST00000569020 HES6Q96HZ4 224 aa13.13□□□□□ -0.31
CNOT1-215ENST00000569020 FRMD8P1Q9BZ68 369 aaPredicted RBP13.13□□□□□ -0.31
CNOT1-215ENST00000569020 ASF1BQ9NVP2 202 aa13.13□□□□□ -0.31
CNOT1-215ENST00000569020 SLC39A10Q9ULF5 831 aa13.13□□□□□ -0.31
CNOT1-215ENST00000569020 KLHL20Q9Y2M5 609 aa13.13□□□□□ -0.31
CNOT1-215ENST00000569020 A0A1B0GX78 115 aa13.12□□□□□ -0.31
CNOT1-215ENST00000569020 LIASO43766 372 aa13.12□□□□□ -0.31
CNOT1-215ENST00000569020 CNOT3O75175 753 aaKnown RBP13.12□□□□□ -0.31
CNOT1-215ENST00000569020 GPC4O75487 556 aa13.12□□□□□ -0.31
CNOT1-215ENST00000569020 UMODP07911 640 aa13.12□□□□□ -0.31
CNOT1-215ENST00000569020 ITGA3P26006 1051 aa13.12□□□□□ -0.31
CNOT1-215ENST00000569020 GRIA1P42261 906 aa13.12□□□□□ -0.31
CNOT1-215ENST00000569020 AIMP2Q13155 320 aaKnown RBP13.12□□□□□ -0.31
CNOT1-215ENST00000569020 ELOAQ14241 798 aaKnown RBP13.12□□□□□ -0.31
CNOT1-215ENST00000569020 TMED2Q15363 201 aa13.12□□□□□ -0.31
CNOT1-215ENST00000569020 NR6A1Q15406 480 aa13.12□□□□□ -0.31
CNOT1-215ENST00000569020 SF1Q15637 639 aaKnown RBP13.12□□□□□ -0.31
CNOT1-215ENST00000569020 ZNF534Q76KX8 674 aa13.12□□□□□ -0.31
CNOT1-215ENST00000569020 PPP1R32Q7Z5V6 425 aa13.12□□□□□ -0.31
CNOT1-215ENST00000569020 VRK3Q8IV63 474 aa13.12□□□□□ -0.31
CNOT1-215ENST00000569020 MCATQ8IVS2 390 aaKnown RBP13.12□□□□□ -0.31
CNOT1-215ENST00000569020 FAM20CQ8IXL6 584 aa13.12□□□□□ -0.31
CNOT1-215ENST00000569020 CISD2Q8N5K1 135 aaKnown RBP13.12□□□□□ -0.31
CNOT1-215ENST00000569020 C2orf73Q8N5S3 287 aaPredicted RBP13.12□□□□□ -0.31
CNOT1-215ENST00000569020 LINC01555Q8NAE3 123 aa13.12□□□□□ -0.31
CNOT1-215ENST00000569020 PPHLN1Q8NEY8 458 aaKnown RBP13.12□□□□□ -0.31
CNOT1-215ENST00000569020 OR2L8Q8NGY9 312 aa13.12□□□□□ -0.31
CNOT1-215ENST00000569020 GSDMBQ8TAX9 411 aa13.12□□□□□ -0.31
CNOT1-215ENST00000569020 FKBP10Q96AY3 582 aa13.12□□□□□ -0.31
CNOT1-215ENST00000569020 ZNF778Q96MU6 729 aa13.12□□□□□ -0.31
CNOT1-215ENST00000569020 PANX3Q96QZ0 392 aa13.12□□□□□ -0.31
CNOT1-215ENST00000569020 MENTQ9BUN1 341 aa13.12□□□□□ -0.31
CNOT1-215ENST00000569020 RAB11FIP5Q9BXF6 653 aa13.12□□□□□ -0.31
CNOT1-215ENST00000569020 RAB6BQ9NRW1 208 aa13.12□□□□□ -0.31
CNOT1-215ENST00000569020 CDC23Q9UJX2 597 aa13.12□□□□□ -0.31
CNOT1-215ENST00000569020 ZNF148Q9UQR1 794 aa13.12□□□□□ -0.31
CNOT1-215ENST00000569020 TCAF1Q9Y4C2 921 aa13.12□□□□□ -0.31
CNOT1-215ENST00000569020 MRFAP1Q9Y605 127 aa13.12□□□□□ -0.31
CNOT1-215ENST00000569020 DOCK10Q96BY6 2186 aa13.11□□□□□ -0.31
CNOT1-215ENST00000569020 A1L4Q6 167 aa13.11□□□□□ -0.31
CNOT1-215ENST00000569020 IQCF5A8MTL0 148 aa13.11□□□□□ -0.31
CNOT1-215ENST00000569020 MASP2O00187 686 aa13.11□□□□□ -0.31
CNOT1-215ENST00000569020 PRMT5O14744 637 aaPredicted RBP13.11□□□□□ -0.31
CNOT1-215ENST00000569020 RASGRF2O14827 1237 aa13.11□□□□□ -0.31
CNOT1-215ENST00000569020 DSCR3O14972 297 aa13.11□□□□□ -0.31
CNOT1-215ENST00000569020 KPNA5O15131 536 aa13.11□□□□□ -0.31
CNOT1-215ENST00000569020 FKBP9O95302 570 aa13.11□□□□□ -0.31
CNOT1-215ENST00000569020 CBX6O95503 412 aa13.11□□□□□ -0.31
CNOT1-215ENST00000569020 ALBP02768 609 aa13.11□□□□□ -0.31
CNOT1-215ENST00000569020 MMP11P24347 488 aa13.11□□□□□ -0.31
CNOT1-215ENST00000569020 GCGRP47871 477 aa13.11□□□□□ -0.31
CNOT1-215ENST00000569020 GLRBP48167 497 aa13.11□□□□□ -0.31
CNOT1-215ENST00000569020 TTPAP49638 278 aa13.11□□□□□ -0.31
CNOT1-215ENST00000569020 FOXL2P58012 376 aa13.11□□□□□ -0.31
CNOT1-215ENST00000569020 SEMA3AQ14563 771 aa13.11□□□□□ -0.31
CNOT1-215ENST00000569020 GRM7Q14831 915 aa13.11□□□□□ -0.31
CNOT1-215ENST00000569020 OASLQ15646 514 aaKnown RBP13.11□□□□□ -0.31
CNOT1-215ENST00000569020 TCTE1Q5JU00 501 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms