RNA–Protein interactions for RNA: ENST00000568883.5

PKM-222, Transcript of pyruvate kinase M1/2, human

TSL 5 BASIC

Gene PKM, Length 1,863 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKM-222	ENST00000568883	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	12.36	□□□□□ -0.43
PKM-222	ENST00000568883	NEK10	Q6ZWH5	1172 aa		12.36	□□□□□ -0.43
PKM-222	ENST00000568883	MSRB3	Q8IXL7	192 aa		12.36	□□□□□ -0.43
PKM-222	ENST00000568883	SLC39A11	Q8N1S5	342 aa		12.36	□□□□□ -0.43
PKM-222	ENST00000568883	KRTCAP2	Q8N6L1	136 aa		12.36	□□□□□ -0.43
PKM-222	ENST00000568883	BEND7	Q8N7W2	519 aa	Predicted RBP	12.36	□□□□□ -0.43
PKM-222	ENST00000568883	L3MBTL4	Q8NA19	623 aa		12.36	□□□□□ -0.43
PKM-222	ENST00000568883	GPR26	Q8NDV2	337 aa		12.36	□□□□□ -0.43
PKM-222	ENST00000568883	SETD9	Q8NE22	299 aa		12.36	□□□□□ -0.43
PKM-222	ENST00000568883	NELL1	Q92832	810 aa		12.36	□□□□□ -0.43
PKM-222	ENST00000568883	BHMT	Q93088	406 aa		12.36	□□□□□ -0.43
PKM-222	ENST00000568883	BORCS5	Q969J3	196 aa		12.36	□□□□□ -0.43
PKM-222	ENST00000568883	TBC1D20	Q96BZ9	403 aa		12.36	□□□□□ -0.43
PKM-222	ENST00000568883	ECHDC3	Q96DC8	303 aa		12.36	□□□□□ -0.43
PKM-222	ENST00000568883	CCDC97	Q96F63	343 aa	Predicted RBP	12.36	□□□□□ -0.43
PKM-222	ENST00000568883	SCLY	Q96I15	445 aa		12.36	□□□□□ -0.43
PKM-222	ENST00000568883	PYURF	Q96I23	114 aa		12.36	□□□□□ -0.43
PKM-222	ENST00000568883	CCDC138	Q96M89	665 aa		12.36	□□□□□ -0.43
PKM-222	ENST00000568883	MCCC1	Q96RQ3	725 aa	Predicted RBP	12.36	□□□□□ -0.43
PKM-222	ENST00000568883	SLC22A12	Q96S37	553 aa		12.36	□□□□□ -0.43
PKM-222	ENST00000568883	DCUN1D5	Q9BTE7	237 aa		12.36	□□□□□ -0.43
PKM-222	ENST00000568883	TBCD	Q9BTW9	1192 aa		12.36	□□□□□ -0.43
PKM-222	ENST00000568883	CPEB1	Q9BZB8	566 aa	Known RBP	12.36	□□□□□ -0.43
PKM-222	ENST00000568883	TNKS2	Q9H2K2	1166 aa		12.36	□□□□□ -0.43
PKM-222	ENST00000568883	SUV39H2	Q9H5I1	410 aa		12.36	□□□□□ -0.43
PKM-222	ENST00000568883	SOX17	Q9H6I2	414 aa	Predicted RBP	12.36	□□□□□ -0.43
PKM-222	ENST00000568883	GALNT8	Q9NY28	637 aa		12.36	□□□□□ -0.43
PKM-222	ENST00000568883	CFAP97	Q9P2B7	532 aa		12.36	□□□□□ -0.43
PKM-222	ENST00000568883	SLC25A13	Q9UJS0	675 aa		12.36	□□□□□ -0.43
PKM-222	ENST00000568883	PDE10A	Q9Y233	779 aa		12.36	□□□□□ -0.43
PKM-222	ENST00000568883	PCDHB14	Q9Y5E9	798 aa		12.36	□□□□□ -0.43
PKM-222	ENST00000568883	TRAV19	A0A0A6YYK7	116 aa		12.36	□□□□□ -0.43
PKM-222	ENST00000568883		H0Y858	1186 aa		12.36	□□□□□ -0.43
PKM-222	ENST00000568883	SCAMP3	O14828	347 aa	Known RBP	12.36	□□□□□ -0.43
PKM-222	ENST00000568883	UGDH	O60701	494 aa		12.36	□□□□□ -0.43
PKM-222	ENST00000568883	PQBP1	O60828	265 aa	Known RBP	12.36	□□□□□ -0.43
PKM-222	ENST00000568883	CCNDBP1	O95273	360 aa		12.36	□□□□□ -0.43
PKM-222	ENST00000568883	SERPINA1	P01009	418 aa		12.36	□□□□□ -0.43
PKM-222	ENST00000568883	LAG3	P18627	525 aa		12.36	□□□□□ -0.43
PKM-222	ENST00000568883	PRPS1L1	P21108	318 aa		12.36	□□□□□ -0.43
PKM-222	ENST00000568883	AOAH	P28039	575 aa		12.36	□□□□□ -0.43
PKM-222	ENST00000568883	ELK4	P28324	431 aa		12.36	□□□□□ -0.43
PKM-222	ENST00000568883	SHMT2	P34897	504 aa		12.36	□□□□□ -0.43
PKM-222	ENST00000568883	TRPC1	P48995	793 aa		12.36	□□□□□ -0.43
PKM-222	ENST00000568883	POLR2L	P62875	67 aa	Known RBP	12.36	□□□□□ -0.43
PKM-222	ENST00000568883	VAC14	Q08AM6	782 aa		12.36	□□□□□ -0.43
PKM-222	ENST00000568883	ERICH5	Q6P6B1	374 aa		12.36	□□□□□ -0.43
PKM-222	ENST00000568883	TMEM26	Q6ZUK4	368 aa		12.36	□□□□□ -0.43
PKM-222	ENST00000568883	DDX53	Q86TM3	631 aa	Known RBP	12.36	□□□□□ -0.43
PKM-222	ENST00000568883	GPR65	Q8IYL9	337 aa		12.36	□□□□□ -0.43
PKM-222	ENST00000568883	ZNF557	Q8N988	423 aa	Predicted RBP	12.36	□□□□□ -0.43
PKM-222	ENST00000568883	FNDC8	Q8TC99	324 aa		12.36	□□□□□ -0.43
PKM-222	ENST00000568883	MCOLN3	Q8TDD5	553 aa		12.36	□□□□□ -0.43
PKM-222	ENST00000568883	SKA2	Q8WVK7	121 aa	Predicted RBP	12.36	□□□□□ -0.43
PKM-222	ENST00000568883	CEP44	Q9C0F1	390 aa		12.36	□□□□□ -0.43
PKM-222	ENST00000568883	FANCE	Q9HB96	536 aa		12.36	□□□□□ -0.43
PKM-222	ENST00000568883	IL21	Q9HBE4	155 aa		12.36	□□□□□ -0.43
PKM-222	ENST00000568883	ZNF334	Q9HCZ1	680 aa	Predicted RBP	12.36	□□□□□ -0.43
PKM-222	ENST00000568883	TLR9	Q9NR96	1032 aa		12.36	□□□□□ -0.43
PKM-222	ENST00000568883	DNAJC11	Q9NVH1	559 aa		12.36	□□□□□ -0.43
PKM-222	ENST00000568883	MAPRE3	Q9UPY8	281 aa		12.36	□□□□□ -0.43
PKM-222	ENST00000568883	SH3PXD2B	A1X283	911 aa		12.35	□□□□□ -0.43
PKM-222	ENST00000568883	QSOX1	O00391	747 aa		12.35	□□□□□ -0.43
PKM-222	ENST00000568883	RFXANK	O14593	260 aa		12.35	□□□□□ -0.43
PKM-222	ENST00000568883	HS6ST1	O60243	411 aa		12.35	□□□□□ -0.43
PKM-222	ENST00000568883	ATE1	O95260	518 aa		12.35	□□□□□ -0.43
PKM-222	ENST00000568883	POP4	O95707	220 aa	Known RBP	12.35	□□□□□ -0.43
PKM-222	ENST00000568883	SRC	P12931	536 aa		12.35	□□□□□ -0.43
PKM-222	ENST00000568883	TCF3	P15923	654 aa		12.35	□□□□□ -0.43
PKM-222	ENST00000568883	GABRR2	P28476	465 aa		12.35	□□□□□ -0.43
PKM-222	ENST00000568883	GK	P32189	559 aa		12.35	□□□□□ -0.43
PKM-222	ENST00000568883	CCR7	P32248	378 aa		12.35	□□□□□ -0.43
PKM-222	ENST00000568883	CA5A	P35218	305 aa		12.35	□□□□□ -0.43
PKM-222	ENST00000568883	YAP1	P46937	504 aa	Known RBP	12.35	□□□□□ -0.43
PKM-222	ENST00000568883	SLC6A12	P48065	614 aa		12.35	□□□□□ -0.43
PKM-222	ENST00000568883	SRSF11	Q05519	484 aa	Known RBP	12.35	□□□□□ -0.43
PKM-222	ENST00000568883	TMED1	Q13445	227 aa		12.35	□□□□□ -0.43
PKM-222	ENST00000568883	GBX1	Q14549	363 aa		12.35	□□□□□ -0.43
PKM-222	ENST00000568883	AAK1	Q2M2I8	961 aa		12.35	□□□□□ -0.43
PKM-222	ENST00000568883	ZNF829	Q3KNS6	432 aa	Predicted RBP	12.35	□□□□□ -0.43
PKM-222	ENST00000568883	DGKK	Q5KSL6	1271 aa		12.35	□□□□□ -0.43
PKM-222	ENST00000568883	C6orf141	Q5SZD1	244 aa		12.35	□□□□□ -0.43
PKM-222	ENST00000568883	C22orf39	Q6P5X5	142 aa		12.35	□□□□□ -0.43
PKM-222	ENST00000568883	SERPINA11	Q86U17	422 aa		12.35	□□□□□ -0.43
PKM-222	ENST00000568883	TSPAN33	Q86UF1	283 aa		12.35	□□□□□ -0.43
PKM-222	ENST00000568883	PLPP6	Q8IY26	295 aa		12.35	□□□□□ -0.43
PKM-222	ENST00000568883	ADGRG2	Q8IZP9	1017 aa		12.35	□□□□□ -0.43
PKM-222	ENST00000568883	ARL10	Q8N8L6	244 aa		12.35	□□□□□ -0.43
PKM-222	ENST00000568883	ASB11	Q8WXH4	323 aa		12.35	□□□□□ -0.43
PKM-222	ENST00000568883	BEGAIN	Q9BUH8	593 aa		12.35	□□□□□ -0.43
PKM-222	ENST00000568883	IKZF5	Q9H5V7	419 aa		12.35	□□□□□ -0.43
PKM-222	ENST00000568883	PREB	Q9HCU5	417 aa		12.35	□□□□□ -0.43
PKM-222	ENST00000568883	PALMD	Q9NP74	551 aa		12.35	□□□□□ -0.43
PKM-222	ENST00000568883	RAD18	Q9NS91	495 aa		12.35	□□□□□ -0.43
PKM-222	ENST00000568883	TBCCD1	Q9NVR7	557 aa		12.35	□□□□□ -0.43
PKM-222	ENST00000568883	SPG21	Q9NZD8	308 aa		12.35	□□□□□ -0.43
PKM-222	ENST00000568883	RPS6KA6	Q9UK32	745 aa		12.35	□□□□□ -0.43
PKM-222	ENST00000568883	HS3ST2	Q9Y278	367 aa		12.35	□□□□□ -0.43
PKM-222	ENST00000568883	KCNE1B	A0A087WTH5	132 aa		12.34	□□□□□ -0.43
PKM-222	ENST00000568883	GRM6	O15303	877 aa		12.34	□□□□□ -0.43

Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms