RNA–Protein interactions for RNA: ENST00000568782.1

UBR1-207, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-207	ENST00000568782	PRICKLE2	Q7Z3G6	844 aa		10.01	□□□□□ -0.81
UBR1-207	ENST00000568782	TMEM135	Q86UB9	458 aa		10.01	□□□□□ -0.81
UBR1-207	ENST00000568782	KCNMB4	Q86W47	210 aa		10.01	□□□□□ -0.81
UBR1-207	ENST00000568782	VRK3	Q8IV63	474 aa		10.01	□□□□□ -0.81
UBR1-207	ENST00000568782	KLHL7	Q8IXQ5	586 aa		10.01	□□□□□ -0.81
UBR1-207	ENST00000568782	DSEL	Q8IZU8	1212 aa		10.01	□□□□□ -0.81
UBR1-207	ENST00000568782	NAT8L	Q8N9F0	302 aa		10.01	□□□□□ -0.81
UBR1-207	ENST00000568782	OR2L8	Q8NGY9	312 aa		10.01	□□□□□ -0.81
UBR1-207	ENST00000568782	THAP4	Q8WY91	577 aa		10.01	□□□□□ -0.81
UBR1-207	ENST00000568782	LPGAT1	Q92604	370 aa		10.01	□□□□□ -0.81
UBR1-207	ENST00000568782	DLG3	Q92796	817 aa		10.01	□□□□□ -0.81
UBR1-207	ENST00000568782	SLCO2A1	Q92959	643 aa		10.01	□□□□□ -0.81
UBR1-207	ENST00000568782	ZUFSP	Q96AP4	578 aa		10.01	□□□□□ -0.81
UBR1-207	ENST00000568782	PPM1M	Q96MI6	270 aa		10.01	□□□□□ -0.81
UBR1-207	ENST00000568782	CHRNA10	Q9GZZ6	450 aa		10.01	□□□□□ -0.81
UBR1-207	ENST00000568782	ACTL8	Q9H568	366 aa		10.01	□□□□□ -0.81
UBR1-207	ENST00000568782	SNX7	Q9UNH6	387 aa		10.01	□□□□□ -0.81
UBR1-207	ENST00000568782	PLCL2	Q9UPR0	1127 aa		10.01	□□□□□ -0.81
UBR1-207	ENST00000568782	MAN2B2	Q9Y2E5	1009 aa		10.01	□□□□□ -0.81
UBR1-207	ENST00000568782	MRPS18B	Q9Y676	258 aa	Known RBP	10.01	□□□□□ -0.81
UBR1-207	ENST00000568782	FAM169A	Q9Y6X4	670 aa		10.01	□□□□□ -0.81
UBR1-207	ENST00000568782	ANKRD12	Q6UB98	2062 aa		10.01	□□□□□ -0.81
UBR1-207	ENST00000568782	ATM	Q13315	3056 aa		10.01	□□□□□ -0.81
UBR1-207	ENST00000568782	CCDC88C	Q9P219	2028 aa		10	□□□□□ -0.81
UBR1-207	ENST00000568782	ZBTB14	O43829	449 aa		10	□□□□□ -0.81
UBR1-207	ENST00000568782	SLC28A2	O43868	658 aa		10	□□□□□ -0.81
UBR1-207	ENST00000568782	NIPSNAP2	O75323	286 aa		10	□□□□□ -0.81
UBR1-207	ENST00000568782	VPS26A	O75436	327 aa		10	□□□□□ -0.81
UBR1-207	ENST00000568782	C1orf105	O95561	183 aa		10	□□□□□ -0.81
UBR1-207	ENST00000568782	RAB40AL	P0C0E4	278 aa		10	□□□□□ -0.81
UBR1-207	ENST00000568782	ENO3	P13929	434 aa	Predicted RBP	10	□□□□□ -0.81
UBR1-207	ENST00000568782	ARNT	P27540	789 aa		10	□□□□□ -0.81
UBR1-207	ENST00000568782	CMPK1	P30085	196 aa		10	□□□□□ -0.81
UBR1-207	ENST00000568782	SKIV2L2	P42285	1042 aa	Known RBP	10	□□□□□ -0.81
UBR1-207	ENST00000568782	RGS4	P49798	205 aa		10	□□□□□ -0.81
UBR1-207	ENST00000568782	ARSF	P54793	590 aa		10	□□□□□ -0.81
UBR1-207	ENST00000568782	GPS2	Q13227	327 aa		10	□□□□□ -0.81
UBR1-207	ENST00000568782	CTBP1	Q13363	440 aa		10	□□□□□ -0.81
UBR1-207	ENST00000568782	TSTA3	Q13630	321 aa	Predicted RBP	10	□□□□□ -0.81
UBR1-207	ENST00000568782	MORF4L2	Q15014	288 aa		10	□□□□□ -0.81
UBR1-207	ENST00000568782	KLHL38	Q2WGJ6	581 aa		10	□□□□□ -0.81
UBR1-207	ENST00000568782	TCTE1	Q5JU00	501 aa		10	□□□□□ -0.81
UBR1-207	ENST00000568782	SPANXN3	Q5MJ09	141 aa		10	□□□□□ -0.81
UBR1-207	ENST00000568782	CTSL3P	Q5NE16	218 aa		10	□□□□□ -0.81
UBR1-207	ENST00000568782	RNASEH2B	Q5TBB1	312 aa	Known RBP	10	□□□□□ -0.81
UBR1-207	ENST00000568782	PAPD7	Q5XG87	772 aa	Known RBP	10	□□□□□ -0.81
UBR1-207	ENST00000568782	CDHR3	Q6ZTQ4	885 aa		10	□□□□□ -0.81
UBR1-207	ENST00000568782	NEK10	Q6ZWH5	1172 aa		10	□□□□□ -0.81
UBR1-207	ENST00000568782	TRIM73	Q86UV7	250 aa		10	□□□□□ -0.81
UBR1-207	ENST00000568782	TAX1BP1	Q86VP1	789 aa		10	□□□□□ -0.81
UBR1-207	ENST00000568782	SYTL1	Q8IYJ3	562 aa		10	□□□□□ -0.81
UBR1-207	ENST00000568782	C2orf73	Q8N5S3	287 aa	Predicted RBP	10	□□□□□ -0.81
UBR1-207	ENST00000568782	EXD3	Q8N9H8	876 aa		10	□□□□□ -0.81
UBR1-207	ENST00000568782	BBOF1	Q8ND07	529 aa		10	□□□□□ -0.81
UBR1-207	ENST00000568782	OR1L3	Q8NH93	324 aa		10	□□□□□ -0.81
UBR1-207	ENST00000568782	C9orf43	Q8TAL5	461 aa	Predicted RBP	10	□□□□□ -0.81
UBR1-207	ENST00000568782	PROKR1	Q8TCW9	393 aa		10	□□□□□ -0.81
UBR1-207	ENST00000568782	LKAAEAR1	Q8TD35	194 aa		10	□□□□□ -0.81
UBR1-207	ENST00000568782	INPP5D	Q92835	1189 aa		10	□□□□□ -0.81
UBR1-207	ENST00000568782	FAM136A	Q96C01	138 aa		10	□□□□□ -0.81
UBR1-207	ENST00000568782	PDLIM2	Q96JY6	352 aa		10	□□□□□ -0.81
UBR1-207	ENST00000568782	BIRC8	Q96P09	236 aa		10	□□□□□ -0.81
UBR1-207	ENST00000568782	NLN	Q9BYT8	704 aa		10	□□□□□ -0.81
UBR1-207	ENST00000568782	SPHK1	Q9NYA1	384 aa		10	□□□□□ -0.81
UBR1-207	ENST00000568782	SPATA7	Q9P0W8	599 aa		10	□□□□□ -0.81
UBR1-207	ENST00000568782	KLHL42	Q9P2K6	505 aa		10	□□□□□ -0.81
UBR1-207	ENST00000568782	NDOR1	Q9UHB4	597 aa		10	□□□□□ -0.81
UBR1-207	ENST00000568782	TSR3	Q9UJK0	312 aa	Known RBP	10	□□□□□ -0.81
UBR1-207	ENST00000568782	FBXO5	Q9UKT4	447 aa		10	□□□□□ -0.81
UBR1-207	ENST00000568782	CDYL	Q9Y232	598 aa		10	□□□□□ -0.81
UBR1-207	ENST00000568782	NEU2	Q9Y3R4	380 aa		10	□□□□□ -0.81
UBR1-207	ENST00000568782	TARM1	B6A8C7	271 aa		9.99	□□□□□ -0.81
UBR1-207	ENST00000568782	ZSCAN9	O15535	394 aa	Predicted RBP	9.99	□□□□□ -0.81
UBR1-207	ENST00000568782	RFPL1	O75677	317 aa		9.99	□□□□□ -0.81
UBR1-207	ENST00000568782	CCNDBP1	O95273	360 aa		9.99	□□□□□ -0.81
UBR1-207	ENST00000568782	SYF2	O95926	243 aa	Known RBP	9.99	□□□□□ -0.81
UBR1-207	ENST00000568782	CBSL	P0DN79	551 aa		9.99	□□□□□ -0.81
UBR1-207	ENST00000568782	ERVK-10	P10266	1014 aa		9.99	□□□□□ -0.81
UBR1-207	ENST00000568782	MAG	P20916	626 aa		9.99	□□□□□ -0.81
UBR1-207	ENST00000568782	ALAS2	P22557	587 aa		9.99	□□□□□ -0.81
UBR1-207	ENST00000568782	F8A1	P23610	371 aa		9.99	□□□□□ -0.81
UBR1-207	ENST00000568782	CASQ1	P31415	396 aa		9.99	□□□□□ -0.81
UBR1-207	ENST00000568782	RPA3	P35244	121 aa	Predicted RBP	9.99	□□□□□ -0.81
UBR1-207	ENST00000568782	CBS	P35520	551 aa		9.99	□□□□□ -0.81
UBR1-207	ENST00000568782	RRAD	P55042	308 aa		9.99	□□□□□ -0.81
UBR1-207	ENST00000568782	ARL4C	P56559	192 aa		9.99	□□□□□ -0.81
UBR1-207	ENST00000568782	DCD	P81605	110 aa	Known RBP	9.99	□□□□□ -0.81
UBR1-207	ENST00000568782	CALCOCO2	Q13137	446 aa		9.99	□□□□□ -0.81
UBR1-207	ENST00000568782	FAM214A	Q32MH5	1076 aa		9.99	□□□□□ -0.81
UBR1-207	ENST00000568782	BBS9	Q3SYG4	887 aa		9.99	□□□□□ -0.81
UBR1-207	ENST00000568782	HSP90AA5P	Q58FG0	334 aa		9.99	□□□□□ -0.81
UBR1-207	ENST00000568782	YOD1	Q5VVQ6	348 aa	Predicted RBP	9.99	□□□□□ -0.81
UBR1-207	ENST00000568782	MLIP	Q5VWP3	458 aa		9.99	□□□□□ -0.81
UBR1-207	ENST00000568782	FIGLA	Q6QHK4	219 aa		9.99	□□□□□ -0.81
UBR1-207	ENST00000568782	ATG14	Q6ZNE5	492 aa		9.99	□□□□□ -0.81
UBR1-207	ENST00000568782	CENPU	Q71F23	418 aa		9.99	□□□□□ -0.81
UBR1-207	ENST00000568782	MAATS1	Q7Z4T9	603 aa		9.99	□□□□□ -0.81
UBR1-207	ENST00000568782	RAB43	Q86YS6	212 aa		9.99	□□□□□ -0.81
UBR1-207	ENST00000568782	TTC29	Q8NA56	475 aa	Predicted RBP	9.99	□□□□□ -0.81
UBR1-207	ENST00000568782	OR9A1P	Q8NGU1	263 aa		9.99	□□□□□ -0.81

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