RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 TRIM25Q14258 630 aaKnown RBP22.7■■□□□ 1.22
LINC00543-201ENST00000567234 RETREG3Q86VR2 466 aa22.7■■□□□ 1.22
LINC00543-201ENST00000567234 VRK3Q8IV63 474 aa22.7■■□□□ 1.22
LINC00543-201ENST00000567234 MINDY1Q8N5J2 469 aa22.7■■□□□ 1.22
LINC00543-201ENST00000567234 FNDC5Q8NAU1 212 aa22.7■■□□□ 1.22
LINC00543-201ENST00000567234 ST13P5Q8NFI4 369 aaPredicted RBP22.7■■□□□ 1.22
LINC00543-201ENST00000567234 ARRDC3Q96B67 414 aa22.7■■□□□ 1.22
LINC00543-201ENST00000567234 FAM129BQ96TA1 746 aa22.7■■□□□ 1.22
LINC00543-201ENST00000567234 PRPF18Q99633 342 aaKnown RBP22.7■■□□□ 1.22
LINC00543-201ENST00000567234 MAP10Q9P2G4 905 aa22.7■■□□□ 1.22
LINC00543-201ENST00000567234 CD300AQ9UGN4 299 aa22.7■■□□□ 1.22
LINC00543-201ENST00000567234 SPTBN5Q9NRC6 3674 aaKnown RBP22.7■■□□□ 1.22
LINC00543-201ENST00000567234 SLC28A1O00337 649 aa22.69■■□□□ 1.22
LINC00543-201ENST00000567234 ATG13O75143 517 aa22.69■■□□□ 1.22
LINC00543-201ENST00000567234 BMP10O95393 424 aa22.69■■□□□ 1.22
LINC00543-201ENST00000567234 EIF2DP41214 584 aaKnown RBP22.69■■□□□ 1.22
LINC00543-201ENST00000567234 MAPK9P45984 424 aa22.69■■□□□ 1.22
LINC00543-201ENST00000567234 PRLHRP49683 370 aa22.69■■□□□ 1.22
LINC00543-201ENST00000567234 GALK1P51570 392 aa22.69■■□□□ 1.22
LINC00543-201ENST00000567234 KCNK10P57789 538 aa22.69■■□□□ 1.22
LINC00543-201ENST00000567234 MS4A2Q01362 244 aa22.69■■□□□ 1.22
LINC00543-201ENST00000567234 RUNX3Q13761 415 aa22.69■■□□□ 1.22
LINC00543-201ENST00000567234 SPATS1Q496A3 300 aa22.69■■□□□ 1.22
LINC00543-201ENST00000567234 VPS26BQ4G0F5 336 aa22.69■■□□□ 1.22
LINC00543-201ENST00000567234 ANKRD54Q6NXT1 300 aa22.69■■□□□ 1.22
LINC00543-201ENST00000567234 DUS1LQ6P1R4 473 aaKnown RBP22.69■■□□□ 1.22
LINC00543-201ENST00000567234 TRIM46Q7Z4K8 759 aa22.69■■□□□ 1.22
LINC00543-201ENST00000567234 DSG4Q86SJ6 1040 aa22.69■■□□□ 1.22
LINC00543-201ENST00000567234 CHERPQ8IWX8 916 aaKnown RBP22.69■■□□□ 1.22
LINC00543-201ENST00000567234 TSPAN14Q8NG11 270 aa22.69■■□□□ 1.22
LINC00543-201ENST00000567234 EPS15L1Q9UBC2 864 aa22.69■■□□□ 1.22
LINC00543-201ENST00000567234 CCL27Q9Y4X3 112 aa22.69■■□□□ 1.22
LINC00543-201ENST00000567234 TRIM64CA6NLI5 447 aa22.68■■□□□ 1.22
LINC00543-201ENST00000567234 RGS14O43566 566 aa22.68■■□□□ 1.22
LINC00543-201ENST00000567234 HLA-EP13747 358 aa22.68■■□□□ 1.22
LINC00543-201ENST00000567234 TTKP33981 857 aa22.68■■□□□ 1.22
LINC00543-201ENST00000567234 OPRD1P41143 372 aa22.68■■□□□ 1.22
LINC00543-201ENST00000567234 SLC6A12P48065 614 aa22.68■■□□□ 1.22
LINC00543-201ENST00000567234 NME5P56597 212 aa22.68■■□□□ 1.22
LINC00543-201ENST00000567234 TMEM115Q12893 351 aaPredicted RBP22.68■■□□□ 1.22
LINC00543-201ENST00000567234 ABRAXAS2Q15018 415 aa22.68■■□□□ 1.22
LINC00543-201ENST00000567234 MBOAT1Q6ZNC8 495 aa22.68■■□□□ 1.22
LINC00543-201ENST00000567234 NLRP8Q86W28 1048 aa22.68■■□□□ 1.22
LINC00543-201ENST00000567234 HIPK4Q8NE63 616 aa22.68■■□□□ 1.22
LINC00543-201ENST00000567234 SKA2Q8WVK7 121 aaPredicted RBP22.68■■□□□ 1.22
LINC00543-201ENST00000567234 GLMNQ92990 594 aa22.68■■□□□ 1.22
LINC00543-201ENST00000567234 ABTB1Q969K4 478 aaPredicted RBP22.68■■□□□ 1.22
LINC00543-201ENST00000567234 CLEC1BQ9P126 229 aa22.68■■□□□ 1.22
LINC00543-201ENST00000567234 ITM2BQ9Y287 266 aa22.68■■□□□ 1.22
LINC00543-201ENST00000567234 FAM234BA2RU67 622 aa22.68■■□□□ 1.22
LINC00543-201ENST00000567234 TBC1D3BA6NDS4 549 aa22.68■■□□□ 1.22
LINC00543-201ENST00000567234 GRXCR2A6NFK2 248 aa22.68■■□□□ 1.22
LINC00543-201ENST00000567234 H6PDO95479 791 aa22.68■■□□□ 1.22
LINC00543-201ENST00000567234 CLDN9O95484 217 aa22.68■■□□□ 1.22
LINC00543-201ENST00000567234 GSTM1P09488 218 aa22.68■■□□□ 1.22
LINC00543-201ENST00000567234 ADRB3P13945 408 aa22.68■■□□□ 1.22
LINC00543-201ENST00000567234 GSTM4Q03013 218 aa22.68■■□□□ 1.22
LINC00543-201ENST00000567234 MAD2L1Q13257 205 aaPredicted RBP22.68■■□□□ 1.22
LINC00543-201ENST00000567234 ADAM15Q13444 863 aa22.68■■□□□ 1.22
LINC00543-201ENST00000567234 NR6A1Q15406 480 aa22.68■■□□□ 1.22
LINC00543-201ENST00000567234 GGTA1PQ4G0N0 100 aa22.68■■□□□ 1.22
LINC00543-201ENST00000567234 RASGEF1AQ8N9B8 481 aa22.68■■□□□ 1.22
LINC00543-201ENST00000567234 MAGEB10Q96LZ2 347 aaPredicted RBP22.68■■□□□ 1.22
LINC00543-201ENST00000567234 CCM2Q9BSQ5 444 aa22.68■■□□□ 1.22
LINC00543-201ENST00000567234 WRAP53Q9BUR4 548 aaKnown RBP22.68■■□□□ 1.22
LINC00543-201ENST00000567234 ABCD2Q9UBJ2 740 aa22.68■■□□□ 1.22
LINC00543-201ENST00000567234 MTCH2Q9Y6C9 303 aa22.68■■□□□ 1.22
LINC00543-201ENST00000567234 ZFC3H1O60293 1989 aaKnown RBP22.68■■□□□ 1.22
LINC00543-201ENST00000567234 BRWD1Q9NSI6 2320 aa22.67■■□□□ 1.22
LINC00543-201ENST00000567234 LOC730098B7Z3J9 87 aa22.67■■□□□ 1.22
LINC00543-201ENST00000567234 ULK1O75385 1050 aa22.67■■□□□ 1.22
LINC00543-201ENST00000567234 ZFP36L2P47974 494 aaKnown RBP22.67■■□□□ 1.22
LINC00543-201ENST00000567234 DPTQ07507 201 aa22.67■■□□□ 1.22
LINC00543-201ENST00000567234 TMEM52BQ4KMG9 183 aa22.67■■□□□ 1.22
LINC00543-201ENST00000567234 GALNT13Q8IUC8 556 aa22.67■■□□□ 1.22
LINC00543-201ENST00000567234 RNF148Q8N7C7 305 aa22.67■■□□□ 1.22
LINC00543-201ENST00000567234 ADAMTS16Q8TE57 1224 aa22.67■■□□□ 1.22
LINC00543-201ENST00000567234 SUSD6Q92537 303 aa22.67■■□□□ 1.22
LINC00543-201ENST00000567234 USP7Q93009 1102 aa22.67■■□□□ 1.22
LINC00543-201ENST00000567234 ZNF597Q96LX8 424 aa22.67■■□□□ 1.22
LINC00543-201ENST00000567234 DYRK4Q9NR20 520 aa22.67■■□□□ 1.22
LINC00543-201ENST00000567234 PNPLA3Q9NST1 481 aa22.67■■□□□ 1.22
LINC00543-201ENST00000567234 THAP10Q9P2Z0 257 aaPredicted RBP22.67■■□□□ 1.22
LINC00543-201ENST00000567234 OR2AG2A6NM03 316 aa22.66■■□□□ 1.22
LINC00543-201ENST00000567234 C1QTNF3-AMACRE9PGA6 284 aa22.66■■□□□ 1.22
LINC00543-201ENST00000567234 IFRD1O00458 451 aaPredicted RBP22.66■■□□□ 1.22
LINC00543-201ENST00000567234 EEDO75530 441 aaKnown RBP22.66■■□□□ 1.22
LINC00543-201ENST00000567234 NPPAP01160 153 aa22.66■■□□□ 1.22
LINC00543-201ENST00000567234 GJA4P35212 333 aa22.66■■□□□ 1.22
LINC00543-201ENST00000567234 POLR2JP52435 117 aaKnown RBP22.66■■□□□ 1.22
LINC00543-201ENST00000567234 AP5B1Q2VPB7 878 aa22.66■■□□□ 1.22
LINC00543-201ENST00000567234 YAF2Q8IY57 180 aa22.66■■□□□ 1.22
LINC00543-201ENST00000567234 BHLHE22Q8NFJ8 381 aaPredicted RBP22.66■■□□□ 1.22
LINC00543-201ENST00000567234 RAB7BQ96AH8 199 aa22.66■■□□□ 1.22
LINC00543-201ENST00000567234 TMEM159Q96B96 161 aa22.66■■□□□ 1.22
LINC00543-201ENST00000567234 FBXL8Q96CD0 374 aa22.66■■□□□ 1.22
LINC00543-201ENST00000567234 LRCH3Q96II8 777 aa22.66■■□□□ 1.22
LINC00543-201ENST00000567234 CNBD2Q96M20 576 aa22.66■■□□□ 1.22
LINC00543-201ENST00000567234 ZCCHC2Q9C0B9 1178 aaKnown RBP22.66■■□□□ 1.22
LINC00543-201ENST00000567234 RNF11Q9Y3C5 154 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms