RNA–Protein interactions for RNA: ENST00000567188.5

CNOT1-211, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 1 (best)

Gene CNOT1, Length 7,830 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-211ENST00000567188 HOXD13P35453 343 aa5.87□□□□□ -1.47
CNOT1-211ENST00000567188 TUBP50607 506 aa5.87□□□□□ -1.47
CNOT1-211ENST00000567188 NOMO3P69849 1222 aa5.87□□□□□ -1.47
CNOT1-211ENST00000567188 HNRNPDQ14103 355 aaKnown RBP5.87□□□□□ -1.47
CNOT1-211ENST00000567188 NOMO1Q15155 1222 aa5.87□□□□□ -1.47
CNOT1-211ENST00000567188 COL28A1Q2UY09 1125 aa5.87□□□□□ -1.47
CNOT1-211ENST00000567188 ATP13A4Q4VNC1 1196 aa5.87□□□□□ -1.47
CNOT1-211ENST00000567188 KLHL26Q53HC5 615 aa5.87□□□□□ -1.47
CNOT1-211ENST00000567188 PCID2Q5JVF3 399 aa5.87□□□□□ -1.47
CNOT1-211ENST00000567188 NEPROQ6NW34 567 aa5.87□□□□□ -1.47
CNOT1-211ENST00000567188 LINGO4Q6UY18 593 aa5.87□□□□□ -1.47
CNOT1-211ENST00000567188 GPALPP1Q8IXQ4 340 aa5.87□□□□□ -1.47
CNOT1-211ENST00000567188 OR4C6Q8NH72 309 aa5.87□□□□□ -1.47
CNOT1-211ENST00000567188 TBCDQ9BTW9 1192 aa5.87□□□□□ -1.47
CNOT1-211ENST00000567188 ROGDIQ9GZN7 287 aa5.87□□□□□ -1.47
CNOT1-211ENST00000567188 TMEM138Q9NPI0 162 aa5.87□□□□□ -1.47
CNOT1-211ENST00000567188 RNF112Q9ULX5 631 aa5.87□□□□□ -1.47
CNOT1-211ENST00000567188 F8VP50 259 aa5.87□□□□□ -1.47
CNOT1-211ENST00000567188 ACSL4O60488 711 aa5.87□□□□□ -1.47
CNOT1-211ENST00000567188 CDKN2CP42773 168 aa5.87□□□□□ -1.47
CNOT1-211ENST00000567188 HLCSP50747 726 aa5.87□□□□□ -1.47
CNOT1-211ENST00000567188 ARHGDIBP52566 201 aa5.87□□□□□ -1.47
CNOT1-211ENST00000567188 CBLBQ13191 982 aa5.87□□□□□ -1.47
CNOT1-211ENST00000567188 MTFR2Q6P444 385 aa5.87□□□□□ -1.47
CNOT1-211ENST00000567188 KIAA1324Q6UXG2 1013 aaKnown RBP5.87□□□□□ -1.47
CNOT1-211ENST00000567188 CYP2R1Q6VVX0 501 aa5.87□□□□□ -1.47
CNOT1-211ENST00000567188 CMTR2Q8IYT2 770 aaKnown RBP5.87□□□□□ -1.47
CNOT1-211ENST00000567188 C12orf45Q8N5I9 185 aaPredicted RBP5.87□□□□□ -1.47
CNOT1-211ENST00000567188 ASB9Q96DX5 294 aa5.87□□□□□ -1.47
CNOT1-211ENST00000567188 TXNDC15Q96J42 360 aa5.87□□□□□ -1.47
CNOT1-211ENST00000567188 SLC30A2Q9BRI3 323 aa5.87□□□□□ -1.47
CNOT1-211ENST00000567188 AGO3Q9H9G7 860 aaKnown RBP5.87□□□□□ -1.47
CNOT1-211ENST00000567188 HCFC1R1Q9NWW0 138 aa5.87□□□□□ -1.47
CNOT1-211ENST00000567188 WBP1LQ9NX94 342 aa5.87□□□□□ -1.47
CNOT1-211ENST00000567188 VPS28Q9UK41 221 aa5.87□□□□□ -1.47
CNOT1-211ENST00000567188 MGAT4AQ9UM21 535 aa5.87□□□□□ -1.47
CNOT1-211ENST00000567188 LYVE1Q9Y5Y7 322 aa5.87□□□□□ -1.47
CNOT1-211ENST00000567188 A0A1W2PPW3 197 aa5.87□□□□□ -1.47
CNOT1-211ENST00000567188 MYBPHLA2RUH7 354 aa5.87□□□□□ -1.47
CNOT1-211ENST00000567188 ZBTB42B2RXF5 422 aa5.87□□□□□ -1.47
CNOT1-211ENST00000567188 SCGB2A1O75556 95 aa5.87□□□□□ -1.47
CNOT1-211ENST00000567188 SNAPINO95295 136 aa5.87□□□□□ -1.47
CNOT1-211ENST00000567188 OR56A5P0C7T3 313 aa5.87□□□□□ -1.47
CNOT1-211ENST00000567188 FSHRP23945 695 aa5.87□□□□□ -1.47
CNOT1-211ENST00000567188 EDNRBP24530 442 aa5.87□□□□□ -1.47
CNOT1-211ENST00000567188 MAPK8P45983 427 aa5.87□□□□□ -1.47
CNOT1-211ENST00000567188 ALDH3A2P51648 485 aa5.87□□□□□ -1.47
CNOT1-211ENST00000567188 AFF1P51825 1210 aaKnown RBP5.87□□□□□ -1.47
CNOT1-211ENST00000567188 AKIRIN2Q53H80 203 aa5.87□□□□□ -1.47
CNOT1-211ENST00000567188 FAM199XQ6PEV8 388 aaPredicted RBP5.87□□□□□ -1.47
CNOT1-211ENST00000567188 Q7L0L9 218 aa5.87□□□□□ -1.47
CNOT1-211ENST00000567188 RAB11FIP2Q7L804 512 aa5.87□□□□□ -1.47
CNOT1-211ENST00000567188 SLC37A3Q8NCC5 494 aa5.87□□□□□ -1.47
CNOT1-211ENST00000567188 ZNF670Q9BS34 389 aa5.87□□□□□ -1.47
CNOT1-211ENST00000567188 IFT27Q9BW83 186 aa5.87□□□□□ -1.47
CNOT1-211ENST00000567188 ELAC1Q9H777 363 aaKnown RBP5.87□□□□□ -1.47
CNOT1-211ENST00000567188 IL1RL2Q9HB29 575 aa5.87□□□□□ -1.47
CNOT1-211ENST00000567188 DUS2Q9NX74 493 aaKnown RBP5.87□□□□□ -1.47
CNOT1-211ENST00000567188 AHSPQ9NZD4 102 aa5.87□□□□□ -1.47
CNOT1-211ENST00000567188 GHRLQ9UBU3 117 aa5.87□□□□□ -1.47
CNOT1-211ENST00000567188 FBXO10Q9UK96 956 aa5.87□□□□□ -1.47
CNOT1-211ENST00000567188 SLC39A10Q9ULF5 831 aa5.87□□□□□ -1.47
CNOT1-211ENST00000567188 DHRS7Q9Y394 339 aa5.87□□□□□ -1.47
CNOT1-211ENST00000567188 PCDHGB6Q9Y5F9 930 aa5.87□□□□□ -1.47
CNOT1-211ENST00000567188 EFCAB9A8MZ26 197 aa5.86□□□□□ -1.47
CNOT1-211ENST00000567188 TPH1P17752 444 aa5.86□□□□□ -1.47
CNOT1-211ENST00000567188 LIMK2P53671 638 aa5.86□□□□□ -1.47
CNOT1-211ENST00000567188 HTRA4P83105 476 aaPredicted RBP5.86□□□□□ -1.47
CNOT1-211ENST00000567188 SLC18A2Q05940 514 aa5.86□□□□□ -1.47
CNOT1-211ENST00000567188 OGFRL1Q5TC84 451 aaPredicted RBP5.86□□□□□ -1.47
CNOT1-211ENST00000567188 HACD4Q5VWC8 232 aa5.86□□□□□ -1.47
CNOT1-211ENST00000567188 METTL4Q8N3J2 472 aa5.86□□□□□ -1.47
CNOT1-211ENST00000567188 KLK6Q92876 244 aa5.86□□□□□ -1.47
CNOT1-211ENST00000567188 RIPOR3Q96MK2 946 aa5.86□□□□□ -1.47
CNOT1-211ENST00000567188 SEPHS2Q99611 448 aa5.86□□□□□ -1.47
CNOT1-211ENST00000567188 COPS4Q9BT78 406 aa5.86□□□□□ -1.47
CNOT1-211ENST00000567188 KCNN2Q9H2S1 579 aa5.86□□□□□ -1.47
CNOT1-211ENST00000567188 CNTN3Q9P232 1028 aa5.86□□□□□ -1.47
CNOT1-211ENST00000567188 SLC7A8Q9UHI5 535 aa5.86□□□□□ -1.47
CNOT1-211ENST00000567188 TRAF6Q9Y4K3 522 aa5.86□□□□□ -1.47
CNOT1-211ENST00000567188 DGKBQ9Y6T7 804 aa5.86□□□□□ -1.47
CNOT1-211ENST00000567188 SMCO3A2RU48 225 aa5.86□□□□□ -1.47
CNOT1-211ENST00000567188 BCKDKO14874 412 aa5.86□□□□□ -1.47
CNOT1-211ENST00000567188 ACOX3O15254 700 aa5.86□□□□□ -1.47
CNOT1-211ENST00000567188 PCCBP05166 539 aa5.86□□□□□ -1.47
CNOT1-211ENST00000567188 ERCC1P07992 297 aaPredicted RBP5.86□□□□□ -1.47
CNOT1-211ENST00000567188 ANXA5P08758 320 aa5.86□□□□□ -1.47
CNOT1-211ENST00000567188 VAMP1P23763 118 aa5.86□□□□□ -1.47
CNOT1-211ENST00000567188 AGTR1P30556 359 aa5.86□□□□□ -1.47
CNOT1-211ENST00000567188 KCNT2Q6UVM3 1135 aa5.86□□□□□ -1.47
CNOT1-211ENST00000567188 CREB3L2Q70SY1 520 aa5.86□□□□□ -1.47
CNOT1-211ENST00000567188 PIWIL4Q7Z3Z4 852 aaKnown RBP5.86□□□□□ -1.47
CNOT1-211ENST00000567188 FNDC5Q8NAU1 212 aa5.86□□□□□ -1.47
CNOT1-211ENST00000567188 SLC35C1Q96A29 364 aa5.86□□□□□ -1.47
CNOT1-211ENST00000567188 KREMEN1Q96MU8 473 aa5.86□□□□□ -1.47
CNOT1-211ENST00000567188 CPXM1Q96SM3 734 aa5.86□□□□□ -1.47
CNOT1-211ENST00000567188 TM9SF2Q99805 663 aa5.86□□□□□ -1.47
CNOT1-211ENST00000567188 ZNF436Q9C0F3 470 aaPredicted RBP5.86□□□□□ -1.47
CNOT1-211ENST00000567188 PNO1Q9NRX1 252 aaKnown RBP5.86□□□□□ -1.47
CNOT1-211ENST00000567188 DNMT3LQ9UJW3 386 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms