RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 TFEBP19484 476 aa11.13□□□□□ -0.63
KARS-207ENST00000566560 VARSP26640 1264 aaKnown RBP11.13□□□□□ -0.63
KARS-207ENST00000566560 CAPZBP47756 277 aa11.13□□□□□ -0.63
KARS-207ENST00000566560 GLRBP48167 497 aa11.13□□□□□ -0.63
KARS-207ENST00000566560 RAB28P51157 221 aa11.13□□□□□ -0.63
KARS-207ENST00000566560 KPNA2P52292 529 aaKnown RBP11.13□□□□□ -0.63
KARS-207ENST00000566560 PPP1R3AQ16821 1122 aa11.13□□□□□ -0.63
KARS-207ENST00000566560 TSNAXIP1Q2TAA8 658 aa11.13□□□□□ -0.63
KARS-207ENST00000566560 NKAIN2Q5VXU1 208 aa11.13□□□□□ -0.63
KARS-207ENST00000566560 KLHL35Q6PF15 583 aa11.13□□□□□ -0.63
KARS-207ENST00000566560 MBOAT1Q6ZNC8 495 aa11.13□□□□□ -0.63
KARS-207ENST00000566560 HDXQ7Z353 690 aa11.13□□□□□ -0.63
KARS-207ENST00000566560 TAX1BP1Q86VP1 789 aa11.13□□□□□ -0.63
KARS-207ENST00000566560 OOSP2Q86WS3 158 aa11.13□□□□□ -0.63
KARS-207ENST00000566560 OR9A1PQ8NGU1 263 aa11.13□□□□□ -0.63
KARS-207ENST00000566560 MCOLN3Q8TDD5 553 aa11.13□□□□□ -0.63
KARS-207ENST00000566560 RSC1A1Q92681 617 aa11.13□□□□□ -0.63
KARS-207ENST00000566560 DLG3Q92796 817 aa11.13□□□□□ -0.63
KARS-207ENST00000566560 EXT2Q93063 718 aa11.13□□□□□ -0.63
KARS-207ENST00000566560 PTERQ96BW5 349 aa11.13□□□□□ -0.63
KARS-207ENST00000566560 ZBTB9Q96C00 473 aa11.13□□□□□ -0.63
KARS-207ENST00000566560 NXNL1Q96CM4 212 aa11.13□□□□□ -0.63
KARS-207ENST00000566560 IL17FQ96PD4 163 aa11.13□□□□□ -0.63
KARS-207ENST00000566560 SLC12A9Q9BXP2 914 aa11.13□□□□□ -0.63
KARS-207ENST00000566560 TRIM54Q9BYV2 358 aa11.13□□□□□ -0.63
KARS-207ENST00000566560 CENPHQ9H3R5 247 aa11.13□□□□□ -0.63
KARS-207ENST00000566560 SRMSQ9H3Y6 488 aa11.13□□□□□ -0.63
KARS-207ENST00000566560 TFB2MQ9H5Q4 396 aaKnown RBP11.13□□□□□ -0.63
KARS-207ENST00000566560 XKR8Q9H6D3 395 aa11.13□□□□□ -0.63
KARS-207ENST00000566560 ALG9Q9H6U8 611 aa11.13□□□□□ -0.63
KARS-207ENST00000566560 PARVBQ9HBI1 364 aa11.13□□□□□ -0.63
KARS-207ENST00000566560 UTP6Q9NYH9 597 aaKnown RBP11.13□□□□□ -0.63
KARS-207ENST00000566560 NOVA2Q9UNW9 492 aaKnown RBP11.13□□□□□ -0.63
KARS-207ENST00000566560 PDE10AQ9Y233 779 aa11.13□□□□□ -0.63
KARS-207ENST00000566560 OARD1Q9Y530 152 aa11.13□□□□□ -0.63
KARS-207ENST00000566560 PCDHGA1Q9Y5H4 931 aa11.13□□□□□ -0.63
KARS-207ENST00000566560 SNRNP200O75643 2136 aaKnown RBP11.12□□□□□ -0.63
KARS-207ENST00000566560 A0A1W2PPM1 405 aa11.12□□□□□ -0.63
KARS-207ENST00000566560 GSAPA4D1B5 854 aa11.12□□□□□ -0.63
KARS-207ENST00000566560 GOLGA6L10A6NI86 522 aa11.12□□□□□ -0.63
KARS-207ENST00000566560 D6RAR5 112 aa11.12□□□□□ -0.63
KARS-207ENST00000566560 GUCA1CO95843 209 aa11.12□□□□□ -0.63
KARS-207ENST00000566560 HIST1H2AGP0C0S8 130 aaPredicted RBP11.12□□□□□ -0.63
KARS-207ENST00000566560 MYZAPP0CAP1 466 aa11.12□□□□□ -0.63
KARS-207ENST00000566560 COL6A2P12110 1019 aa11.12□□□□□ -0.63
KARS-207ENST00000566560 HIST1H2ADP20671 130 aa11.12□□□□□ -0.63
KARS-207ENST00000566560 CSF2RBP32927 897 aa11.12□□□□□ -0.63
KARS-207ENST00000566560 AP1S2P56377 157 aa11.12□□□□□ -0.63
KARS-207ENST00000566560 CCL7P80098 99 aa11.12□□□□□ -0.63
KARS-207ENST00000566560 PRKAA1Q13131 559 aa11.12□□□□□ -0.63
KARS-207ENST00000566560 SPIDRQ14159 915 aa11.12□□□□□ -0.63
KARS-207ENST00000566560 GRB7Q14451 532 aa11.12□□□□□ -0.63
KARS-207ENST00000566560 OR4D1Q15615 310 aa11.12□□□□□ -0.63
KARS-207ENST00000566560 ANKS6Q68DC2 871 aa11.12□□□□□ -0.63
KARS-207ENST00000566560 CLEC14AQ86T13 490 aa11.12□□□□□ -0.63
KARS-207ENST00000566560 TRABD2AQ86V40 505 aa11.12□□□□□ -0.63
KARS-207ENST00000566560 AMIGO1Q86WK6 493 aa11.12□□□□□ -0.63
KARS-207ENST00000566560 SRRM1Q8IYB3 904 aaKnown RBP11.12□□□□□ -0.63
KARS-207ENST00000566560 C4orf33Q8N1A6 199 aa11.12□□□□□ -0.63
KARS-207ENST00000566560 PLD6Q8N2A8 252 aaKnown RBP11.12□□□□□ -0.63
KARS-207ENST00000566560 OR4E2Q8NGC2 313 aa11.12□□□□□ -0.63
KARS-207ENST00000566560 DENND1AQ8TEH3 1009 aa11.12□□□□□ -0.63
KARS-207ENST00000566560 KIAA1191Q96A73 305 aa11.12□□□□□ -0.63
KARS-207ENST00000566560 HIST1H2AHQ96KK5 128 aa11.12□□□□□ -0.63
KARS-207ENST00000566560 GFM1Q96RP9 751 aaKnown RBP11.12□□□□□ -0.63
KARS-207ENST00000566560 PKP4Q99569 1192 aa11.12□□□□□ -0.63
KARS-207ENST00000566560 NRTNQ99748 197 aa11.12□□□□□ -0.63
KARS-207ENST00000566560 HIST1H2AJQ99878 128 aa11.12□□□□□ -0.63
KARS-207ENST00000566560 H2AFJQ9BTM1 129 aa11.12□□□□□ -0.63
KARS-207ENST00000566560 MENTQ9BUN1 341 aa11.12□□□□□ -0.63
KARS-207ENST00000566560 ABCG4Q9H172 646 aa11.12□□□□□ -0.63
KARS-207ENST00000566560 LRRN3Q9H3W5 708 aa11.12□□□□□ -0.63
KARS-207ENST00000566560 ARL15Q9NXU5 204 aa11.12□□□□□ -0.63
KARS-207ENST00000566560 OGFRQ9NZT2 677 aa11.12□□□□□ -0.63
KARS-207ENST00000566560 LNPEPQ9UIQ6 1025 aa11.12□□□□□ -0.63
KARS-207ENST00000566560 RNF112Q9ULX5 631 aa11.12□□□□□ -0.63
KARS-207ENST00000566560 APOBEC2Q9Y235 224 aaKnown RBP11.12□□□□□ -0.63
KARS-207ENST00000566560 A0A1W2PQM1 296 aa11.11□□□□□ -0.63
KARS-207ENST00000566560 CCDC189A1A4V9 331 aa11.11□□□□□ -0.63
KARS-207ENST00000566560 DCDC2BA2VCK2 349 aa11.11□□□□□ -0.63
KARS-207ENST00000566560 OR6C74A6NCV1 312 aa11.11□□□□□ -0.63
KARS-207ENST00000566560 OR5K3A6NET4 321 aa11.11□□□□□ -0.63
KARS-207ENST00000566560 NCF1BA6NI72 391 aaPredicted RBP11.11□□□□□ -0.63
KARS-207ENST00000566560 ZNF839A8K0R7 811 aa11.11□□□□□ -0.63
KARS-207ENST00000566560 NCF1CA8MVU1 366 aaPredicted RBP11.11□□□□□ -0.63
KARS-207ENST00000566560 SUPT3HB4E1H0 165 aa11.11□□□□□ -0.63
KARS-207ENST00000566560 MATN2O00339 956 aa11.11□□□□□ -0.63
KARS-207ENST00000566560 CASC3O15234 703 aaKnown RBP11.11□□□□□ -0.63
KARS-207ENST00000566560 B4GAT1O43505 415 aa11.11□□□□□ -0.63
KARS-207ENST00000566560 OPA1O60313 960 aa11.11□□□□□ -0.63
KARS-207ENST00000566560 KERAO60938 352 aa11.11□□□□□ -0.63
KARS-207ENST00000566560 GLRA3O75311 464 aa11.11□□□□□ -0.63
KARS-207ENST00000566560 SUPT3HO75486 399 aa11.11□□□□□ -0.63
KARS-207ENST00000566560 CPNE6O95741 557 aa11.11□□□□□ -0.63
KARS-207ENST00000566560 SLC16A8O95907 504 aa11.11□□□□□ -0.63
KARS-207ENST00000566560 S100BP04271 92 aaPredicted RBP11.11□□□□□ -0.63
KARS-207ENST00000566560 TPBGLP0DKB5 382 aa11.11□□□□□ -0.63
KARS-207ENST00000566560 ERGP11308 486 aa11.11□□□□□ -0.63
KARS-207ENST00000566560 CDK4P11802 303 aa11.11□□□□□ -0.63
KARS-207ENST00000566560 NCF1P14598 390 aaPredicted RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms