RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 CNOT3O75175 753 aaKnown RBP17.62■□□□□ 0.41
USB1-213ENST00000566292 RPN2P04844 631 aa17.62■□□□□ 0.41
USB1-213ENST00000566292 RPS3P23396 243 aaKnown RBP eCLIP17.62■□□□□ 0.412e-6■■□□□ 14.1
USB1-213ENST00000566292 MGAT1P26572 445 aa17.62■□□□□ 0.41
USB1-213ENST00000566292 OTX2P32243 289 aa17.62■□□□□ 0.41
USB1-213ENST00000566292 GCGRP47871 477 aa17.62■□□□□ 0.41
USB1-213ENST00000566292 FOXL2P58012 376 aa17.62■□□□□ 0.41
USB1-213ENST00000566292 SLC9A5Q14940 896 aa17.62■□□□□ 0.41
USB1-213ENST00000566292 TMED2Q15363 201 aa17.62■□□□□ 0.41
USB1-213ENST00000566292 PTRHD1Q6GMV3 140 aaKnown RBP17.62■□□□□ 0.41
USB1-213ENST00000566292 TLDC1Q6P9B6 456 aa17.62■□□□□ 0.41
USB1-213ENST00000566292 CES3Q6UWW8 571 aa17.62■□□□□ 0.41
USB1-213ENST00000566292 C4orf22Q6V702 233 aa17.62■□□□□ 0.41
USB1-213ENST00000566292 MED25Q71SY5 747 aa17.62■□□□□ 0.41
USB1-213ENST00000566292 GSTA5Q7RTV2 222 aa17.62■□□□□ 0.41
USB1-213ENST00000566292 RAB43Q86YS6 212 aa17.62■□□□□ 0.41
USB1-213ENST00000566292 OR2L8Q8NGY9 312 aa17.62■□□□□ 0.41
USB1-213ENST00000566292 PROKR1Q8TCW9 393 aa17.62■□□□□ 0.41
USB1-213ENST00000566292 MFSD3Q96ES6 412 aa17.62■□□□□ 0.41
USB1-213ENST00000566292 KIFC1Q9BW19 673 aa17.62■□□□□ 0.41
USB1-213ENST00000566292 SYBUQ9NX95 663 aa17.62■□□□□ 0.41
USB1-213ENST00000566292 EURLQ9NYK6 297 aa17.62■□□□□ 0.41
USB1-213ENST00000566292 BFARQ9NZS9 450 aa17.62■□□□□ 0.41
USB1-213ENST00000566292 ANKMY1Q9P2S6 941 aa17.62■□□□□ 0.41
USB1-213ENST00000566292 GNPTGQ9UJJ9 305 aa17.62■□□□□ 0.41
USB1-213ENST00000566292 SRPK3Q9UPE1 567 aa17.62■□□□□ 0.41
USB1-213ENST00000566292 ZNF451Q9Y4E5 1061 aa17.62■□□□□ 0.41
USB1-213ENST00000566292 NFS1Q9Y697 457 aa17.62■□□□□ 0.41
USB1-213ENST00000566292 A6NL46 340 aa17.61■□□□□ 0.41
USB1-213ENST00000566292 TTLL8A6PVC2 850 aa17.61■□□□□ 0.41
USB1-213ENST00000566292 SORBS2O94875 1100 aaKnown RBP17.61■□□□□ 0.41
USB1-213ENST00000566292 S1PR4O95977 384 aa17.61■□□□□ 0.41
USB1-213ENST00000566292 CCDC175P0C221 793 aa17.61■□□□□ 0.41
USB1-213ENST00000566292 DCDP81605 110 aaKnown RBP17.61■□□□□ 0.41
USB1-213ENST00000566292 SSPNQ14714 243 aa17.61■□□□□ 0.41
USB1-213ENST00000566292 CTSL3PQ5NE16 218 aa17.61■□□□□ 0.41
USB1-213ENST00000566292 FCRL6Q6DN72 434 aa17.61■□□□□ 0.41
USB1-213ENST00000566292 LRRC8BQ6P9F7 803 aa17.61■□□□□ 0.41
USB1-213ENST00000566292 MRGPREQ86SM8 312 aa17.61■□□□□ 0.41
USB1-213ENST00000566292 MPP5Q8N3R9 675 aa17.61■□□□□ 0.41
USB1-213ENST00000566292 MAIP1Q8WWC4 291 aa17.61■□□□□ 0.41
USB1-213ENST00000566292 PANX3Q96QZ0 392 aa17.61■□□□□ 0.41
USB1-213ENST00000566292 C17orf62Q9BQA9 187 aa17.61■□□□□ 0.41
USB1-213ENST00000566292 MRM3Q9HC36 420 aaKnown RBP17.61■□□□□ 0.41
USB1-213ENST00000566292 SLC22A11Q9NSA0 550 aa17.61■□□□□ 0.41
USB1-213ENST00000566292 TXLNGQ9NUQ3 528 aa17.61■□□□□ 0.41
USB1-213ENST00000566292 IRAK4Q9NWZ3 460 aa17.61■□□□□ 0.41
USB1-213ENST00000566292 IFT80Q9P2H3 777 aaPredicted RBP17.61■□□□□ 0.41
USB1-213ENST00000566292 GPN3Q9UHW5 284 aaPredicted RBP17.61■□□□□ 0.41
USB1-213ENST00000566292 RUVBL2Q9Y230 463 aaKnown RBP17.61■□□□□ 0.41
USB1-213ENST00000566292 PTRH2Q9Y3E5 179 aaKnown RBP17.61■□□□□ 0.41
USB1-213ENST00000566292 PCDHGB7Q9Y5F8 929 aa17.61■□□□□ 0.41
USB1-213ENST00000566292 USP9YO00507 2555 aaPredicted RBP17.61■□□□□ 0.41
USB1-213ENST00000566292 DOCK10Q96BY6 2186 aa17.6■□□□□ 0.41
USB1-213ENST00000566292 KRT87PA6NCN2 255 aa17.6■□□□□ 0.41
USB1-213ENST00000566292 GOLGA8KD6RF30 607 aa17.6■□□□□ 0.41
USB1-213ENST00000566292 GOLGA8TH3BQL2 631 aa17.6■□□□□ 0.41
USB1-213ENST00000566292 RASGRF2O14827 1237 aa17.6■□□□□ 0.41
USB1-213ENST00000566292 PRICKLE3O43900 615 aaPredicted RBP17.6■□□□□ 0.41
USB1-213ENST00000566292 CEP104O60308 925 aa17.6■□□□□ 0.41
USB1-213ENST00000566292 NDUFS3O75489 264 aa17.6■□□□□ 0.41
USB1-213ENST00000566292 VAPBO95292 243 aa17.6■□□□□ 0.41
USB1-213ENST00000566292 TPSB2P20231 275 aa17.6■□□□□ 0.41
USB1-213ENST00000566292 CXCR5P32302 372 aa17.6■□□□□ 0.41
USB1-213ENST00000566292 BDKRB1P46663 353 aa17.6■□□□□ 0.41
USB1-213ENST00000566292 RRADP55042 308 aa17.6■□□□□ 0.41
USB1-213ENST00000566292 EIF3BP55884 814 aaKnown RBP17.6■□□□□ 0.41
USB1-213ENST00000566292 TPSAB1Q15661 275 aa17.6■□□□□ 0.41
USB1-213ENST00000566292 CCSMST1Q4G0I0 132 aa17.6■□□□□ 0.41
USB1-213ENST00000566292 NKAIN1Q4KMZ8 207 aa17.6■□□□□ 0.41
USB1-213ENST00000566292 MRPL14Q6P1L8 145 aaKnown RBP17.6■□□□□ 0.41
USB1-213ENST00000566292 FIGLAQ6QHK4 219 aa17.6■□□□□ 0.41
USB1-213ENST00000566292 ATCAYQ86WG3 371 aa17.6■□□□□ 0.41
USB1-213ENST00000566292 LRRC6Q86X45 466 aa17.6■□□□□ 0.41
USB1-213ENST00000566292 MCATQ8IVS2 390 aaKnown RBP17.6■□□□□ 0.41
USB1-213ENST00000566292 PRELID2Q8N945 189 aa17.6■□□□□ 0.41
USB1-213ENST00000566292 TRIM58Q8NG06 486 aa17.6■□□□□ 0.41
USB1-213ENST00000566292 OR2Y1Q8NGV0 311 aa17.6■□□□□ 0.41
USB1-213ENST00000566292 CPT1CQ8TCG5 803 aa17.6■□□□□ 0.41
USB1-213ENST00000566292 SLC22A18Q96BI1 424 aa17.6■□□□□ 0.41
USB1-213ENST00000566292 BIRC8Q96P09 236 aa17.6■□□□□ 0.41
USB1-213ENST00000566292 NDC1Q9BTX1 674 aa17.6■□□□□ 0.41
USB1-213ENST00000566292 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.6■□□□□ 0.41
USB1-213ENST00000566292 NDOR1Q9UHB4 597 aa17.6■□□□□ 0.41
USB1-213ENST00000566292 SLC39A10Q9ULF5 831 aa17.6■□□□□ 0.41
USB1-213ENST00000566292 TTC7AQ9ULT0 858 aaPredicted RBP17.6■□□□□ 0.41
USB1-213ENST00000566292 AP3B1O00203 1094 aa17.59■□□□□ 0.41
USB1-213ENST00000566292 C1orf105O95561 183 aa17.59■□□□□ 0.41
USB1-213ENST00000566292 ITGAXP20702 1163 aa17.59■□□□□ 0.41
USB1-213ENST00000566292 FOLR3P41439 243 aa17.59■□□□□ 0.41
USB1-213ENST00000566292 UQCRFS1P47985 274 aa17.59■□□□□ 0.41
USB1-213ENST00000566292 TERF1P54274 439 aa17.59■□□□□ 0.41
USB1-213ENST00000566292 CCZ1BP86790 482 aa17.59■□□□□ 0.41
USB1-213ENST00000566292 CCZ1P86791 482 aaPredicted RBP17.59■□□□□ 0.41
USB1-213ENST00000566292 CDK16Q00536 496 aa17.59■□□□□ 0.41
USB1-213ENST00000566292 RAPSNQ13702 412 aa17.59■□□□□ 0.41
USB1-213ENST00000566292 TRIP13Q15645 432 aaPredicted RBP17.59■□□□□ 0.41
USB1-213ENST00000566292 OTOAQ7RTW8 1153 aa17.59■□□□□ 0.41
USB1-213ENST00000566292 LRRC8AQ8IWT6 810 aa17.59■□□□□ 0.41
USB1-213ENST00000566292 RBMXL3Q8N7X1 1067 aaKnown RBP17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms