RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 ZC3HC1Q86WB0 502 aaKnown RBP13.38□□□□□ -0.27
HERPUD1-210ENST00000565966 RASGRP3Q8IV61 690 aa13.38□□□□□ -0.27
HERPUD1-210ENST00000565966 NLGN4XQ8N0W4 816 aa13.38□□□□□ -0.27
HERPUD1-210ENST00000565966 IL22RA1Q8N6P7 574 aa13.38□□□□□ -0.27
HERPUD1-210ENST00000565966 GPATCH11Q8N954 259 aa13.38□□□□□ -0.27
HERPUD1-210ENST00000565966 NLGN4YQ8NFZ3 816 aaPredicted RBP13.38□□□□□ -0.27
HERPUD1-210ENST00000565966 FAM45AQ8TCE6 357 aa13.38□□□□□ -0.27
HERPUD1-210ENST00000565966 MAGEC3Q8TD91 643 aa13.38□□□□□ -0.27
HERPUD1-210ENST00000565966 RAD51AP1Q96B01 352 aa13.38□□□□□ -0.27
HERPUD1-210ENST00000565966 PPM1MQ96MI6 270 aa13.38□□□□□ -0.27
HERPUD1-210ENST00000565966 FCRL4Q96PJ5 515 aa13.38□□□□□ -0.27
HERPUD1-210ENST00000565966 FMO2Q99518 471 aa13.38□□□□□ -0.27
HERPUD1-210ENST00000565966 RHOXF2Q9BQY4 288 aa13.38□□□□□ -0.27
HERPUD1-210ENST00000565966 MCMBPQ9BTE3 642 aa13.38□□□□□ -0.27
HERPUD1-210ENST00000565966 PITPNM3Q9BZ71 974 aa13.38□□□□□ -0.27
HERPUD1-210ENST00000565966 TWSG1Q9GZX9 223 aa13.38□□□□□ -0.27
HERPUD1-210ENST00000565966 CPNE5Q9HCH3 593 aa13.38□□□□□ -0.27
HERPUD1-210ENST00000565966 SOHLH2Q9NX45 425 aa13.38□□□□□ -0.27
HERPUD1-210ENST00000565966 NSMCE4AQ9NXX6 385 aa13.38□□□□□ -0.27
HERPUD1-210ENST00000565966 TAS2R13Q9NYV9 303 aa13.38□□□□□ -0.27
HERPUD1-210ENST00000565966 TRMT6Q9UJA5 497 aaKnown RBP13.38□□□□□ -0.27
HERPUD1-210ENST00000565966 RARRES3Q9UL19 164 aa13.38□□□□□ -0.27
HERPUD1-210ENST00000565966 PLAGL1Q9UM63 463 aa13.38□□□□□ -0.27
HERPUD1-210ENST00000565966 BTRCQ9Y297 605 aa13.38□□□□□ -0.27
HERPUD1-210ENST00000565966 ZFYVE26Q68DK2 2539 aa13.37□□□□□ -0.27
HERPUD1-210ENST00000565966 K7ENP7 123 aa13.37□□□□□ -0.27
HERPUD1-210ENST00000565966 MAP3K7O43318 606 aa13.37□□□□□ -0.27
HERPUD1-210ENST00000565966 RAD1O60671 282 aa13.37□□□□□ -0.27
HERPUD1-210ENST00000565966 SPAG6O75602 509 aa13.37□□□□□ -0.27
HERPUD1-210ENST00000565966 STK17BO94768 372 aa13.37□□□□□ -0.27
HERPUD1-210ENST00000565966 CHRM5P08912 532 aaPredicted RBP13.37□□□□□ -0.27
HERPUD1-210ENST00000565966 EBLN1P0CF75 366 aa13.37□□□□□ -0.27
HERPUD1-210ENST00000565966 MPC1LP0DKB6 136 aa13.37□□□□□ -0.27
HERPUD1-210ENST00000565966 CBSLP0DN79 551 aa13.37□□□□□ -0.27
HERPUD1-210ENST00000565966 ENO3P13929 434 aaPredicted RBP13.37□□□□□ -0.27
HERPUD1-210ENST00000565966 MCM3P25205 808 aa13.37□□□□□ -0.27
HERPUD1-210ENST00000565966 MAP4P27816 1152 aaKnown RBP13.37□□□□□ -0.27
HERPUD1-210ENST00000565966 PKLRP30613 574 aa13.37□□□□□ -0.27
HERPUD1-210ENST00000565966 CBSP35520 551 aa13.37□□□□□ -0.27
HERPUD1-210ENST00000565966 CCNFP41002 786 aa13.37□□□□□ -0.27
HERPUD1-210ENST00000565966 SKIV2L2P42285 1042 aaKnown RBP13.37□□□□□ -0.27
HERPUD1-210ENST00000565966 TUBB4BP68371 445 aa13.37□□□□□ -0.27
HERPUD1-210ENST00000565966 TUBB3Q13509 450 aa13.37□□□□□ -0.27
HERPUD1-210ENST00000565966 KCNAB1Q14722 419 aa13.37□□□□□ -0.27
HERPUD1-210ENST00000565966 KIR2DS3Q14952 304 aa13.37□□□□□ -0.27
HERPUD1-210ENST00000565966 CCSMST1Q4G0I0 132 aa13.37□□□□□ -0.27
HERPUD1-210ENST00000565966 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.37□□□□□ -0.27
HERPUD1-210ENST00000565966 ARHGAP40Q5TG30 622 aa13.37□□□□□ -0.27
HERPUD1-210ENST00000565966 INO80CQ6PI98 192 aaPredicted RBP13.37□□□□□ -0.27
HERPUD1-210ENST00000565966 PAQR3Q6TCH7 311 aa13.37□□□□□ -0.27
HERPUD1-210ENST00000565966 SPESP1Q6UW49 350 aa13.37□□□□□ -0.27
HERPUD1-210ENST00000565966 CEP128Q6ZU80 1094 aa13.37□□□□□ -0.27
HERPUD1-210ENST00000565966 RELL1Q8IUW5 271 aa13.37□□□□□ -0.27
HERPUD1-210ENST00000565966 IFT20Q8IY31 132 aa13.37□□□□□ -0.27
HERPUD1-210ENST00000565966 CPNE9Q8IYJ1 553 aa13.37□□□□□ -0.27
HERPUD1-210ENST00000565966 CACNA2D3Q8IZS8 1091 aa13.37□□□□□ -0.27
HERPUD1-210ENST00000565966 FBF1Q8TES7 1133 aa13.37□□□□□ -0.27
HERPUD1-210ENST00000565966 SNRNP27Q8WVK2 155 aaKnown RBP13.37□□□□□ -0.27
HERPUD1-210ENST00000565966 CDKL2Q92772 493 aa13.37□□□□□ -0.27
HERPUD1-210ENST00000565966 TRAPPC9Q96Q05 1148 aa13.37□□□□□ -0.27
HERPUD1-210ENST00000565966 OR2A14Q96R47 310 aa13.37□□□□□ -0.27
HERPUD1-210ENST00000565966 OLFM1Q99784 485 aa13.37□□□□□ -0.27
HERPUD1-210ENST00000565966 MENTQ9BUN1 341 aa13.37□□□□□ -0.27
HERPUD1-210ENST00000565966 TSPYL1Q9H0U9 437 aa13.37□□□□□ -0.27
HERPUD1-210ENST00000565966 SYTL2Q9HCH5 934 aa13.37□□□□□ -0.27
HERPUD1-210ENST00000565966 FGF21Q9NSA1 209 aa13.37□□□□□ -0.27
HERPUD1-210ENST00000565966 NINJ2Q9NZG7 142 aa13.37□□□□□ -0.27
HERPUD1-210ENST00000565966 CIDEBQ9UHD4 219 aa13.37□□□□□ -0.27
HERPUD1-210ENST00000565966 SLC39A10Q9ULF5 831 aa13.37□□□□□ -0.27
HERPUD1-210ENST00000565966 VWA7Q9Y334 891 aa13.37□□□□□ -0.27
HERPUD1-210ENST00000565966 MGAQ8IWI9 3026 aa13.37□□□□□ -0.27
HERPUD1-210ENST00000565966 CCDC88CQ9P219 2028 aa13.36□□□□□ -0.27
HERPUD1-210ENST00000565966 ARHGEF33A8MVX0 844 aa13.36□□□□□ -0.27
HERPUD1-210ENST00000565966 ISM1B1AKI9 464 aa13.36□□□□□ -0.27
HERPUD1-210ENST00000565966 EIF3FO00303 357 aaPredicted RBP13.36□□□□□ -0.27
HERPUD1-210ENST00000565966 EFSO43281 561 aa13.36□□□□□ -0.27
HERPUD1-210ENST00000565966 PSIP1O75475 530 aaKnown RBP13.36□□□□□ -0.27
HERPUD1-210ENST00000565966 DLGAP3O95886 979 aa13.36□□□□□ -0.27
HERPUD1-210ENST00000565966 ST6GAL1P15907 406 aa13.36□□□□□ -0.27
HERPUD1-210ENST00000565966 UGT2B7P16662 529 aa13.36□□□□□ -0.27
HERPUD1-210ENST00000565966 FDXRP22570 491 aa13.36□□□□□ -0.27
HERPUD1-210ENST00000565966 STX2P32856 288 aa13.36□□□□□ -0.27
HERPUD1-210ENST00000565966 PGGT1BP53609 377 aa13.36□□□□□ -0.27
HERPUD1-210ENST00000565966 MAP7Q14244 749 aa13.36□□□□□ -0.27
HERPUD1-210ENST00000565966 KBTBD12Q3ZCT8 623 aa13.36□□□□□ -0.27
HERPUD1-210ENST00000565966 UBAP2Q5T6F2 1119 aaKnown RBP13.36□□□□□ -0.27
HERPUD1-210ENST00000565966 TIPARPQ7Z3E1 657 aaKnown RBP13.36□□□□□ -0.27
HERPUD1-210ENST00000565966 PIWIL4Q7Z3Z4 852 aaKnown RBP13.36□□□□□ -0.27
HERPUD1-210ENST00000565966 RAB42Q8N4Z0 105 aa13.36□□□□□ -0.27
HERPUD1-210ENST00000565966 OR8K5Q8NH50 307 aa13.36□□□□□ -0.27
HERPUD1-210ENST00000565966 EEF1AKMT1Q8WVE0 214 aa13.36□□□□□ -0.27
HERPUD1-210ENST00000565966 SLC22A18Q96BI1 424 aa13.36□□□□□ -0.27
HERPUD1-210ENST00000565966 ZNF501Q96CX3 271 aaPredicted RBP13.36□□□□□ -0.27
HERPUD1-210ENST00000565966 ELMO2Q96JJ3 720 aa13.36□□□□□ -0.27
HERPUD1-210ENST00000565966 IL17FQ96PD4 163 aa13.36□□□□□ -0.27
HERPUD1-210ENST00000565966 RAB11FIP5Q9BXF6 653 aa13.36□□□□□ -0.27
HERPUD1-210ENST00000565966 ULBP3Q9BZM4 244 aa13.36□□□□□ -0.27
HERPUD1-210ENST00000565966 CDC42EP4Q9H3Q1 356 aaKnown RBP13.36□□□□□ -0.27
HERPUD1-210ENST00000565966 RHOJQ9H4E5 214 aa13.36□□□□□ -0.27
HERPUD1-210ENST00000565966 SPHK1Q9NYA1 384 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms