RNA–Protein interactions for RNA: ENST00000565550.1

SPSB3-207, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 898 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-207ENST00000565550 SPTBP11277 2137 aa18.29■□□□□ 0.52
SPSB3-207ENST00000565550 CD3EAPO15446 510 aaKnown RBP18.28■□□□□ 0.52
SPSB3-207ENST00000565550 ZNF749O43361 778 aa18.28■□□□□ 0.52
SPSB3-207ENST00000565550 VPS4BO75351 444 aa18.28■□□□□ 0.52
SPSB3-207ENST00000565550 SEC31AO94979 1220 aaKnown RBP18.28■□□□□ 0.52
SPSB3-207ENST00000565550 BBS9Q3SYG4 887 aa18.28■□□□□ 0.52
SPSB3-207ENST00000565550 ANKRD20A4Q4UJ75 823 aa18.28■□□□□ 0.52
SPSB3-207ENST00000565550 FAM198BQ6UWH4 519 aa18.28■□□□□ 0.52
SPSB3-207ENST00000565550 CDHR3Q6ZTQ4 885 aa18.28■□□□□ 0.52
SPSB3-207ENST00000565550 ZNF572Q7Z3I7 529 aaPredicted RBP18.28■□□□□ 0.52
SPSB3-207ENST00000565550 SPNS2Q8IVW8 549 aa18.28■□□□□ 0.52
SPSB3-207ENST00000565550 OTUD6BQ8N6M0 293 aa18.28■□□□□ 0.52
SPSB3-207ENST00000565550 EFCAB3Q8N7B9 438 aa18.28■□□□□ 0.52
SPSB3-207ENST00000565550 PEX13Q92968 403 aa18.28■□□□□ 0.52
SPSB3-207ENST00000565550 SNF8Q96H20 258 aa18.28■□□□□ 0.52
SPSB3-207ENST00000565550 SAMD15Q9P1V8 674 aa18.28■□□□□ 0.52
SPSB3-207ENST00000565550 VPS4AQ9UN37 437 aa18.28■□□□□ 0.52
SPSB3-207ENST00000565550 ZCWPW2A0A1B0GU75 182 aa18.27■□□□□ 0.52
SPSB3-207ENST00000565550 FAM237BA0A1B0GVD1 139 aa18.27■□□□□ 0.52
SPSB3-207ENST00000565550 IQCF5A8MTL0 148 aa18.27■□□□□ 0.52
SPSB3-207ENST00000565550 E7EQ34 232 aa18.27■□□□□ 0.52
SPSB3-207ENST00000565550 AP2A2O94973 939 aa18.27■□□□□ 0.52
SPSB3-207ENST00000565550 GSTM1P09488 218 aa18.27■□□□□ 0.52
SPSB3-207ENST00000565550 GP1BBP13224 206 aa18.27■□□□□ 0.52
SPSB3-207ENST00000565550 UQCRFS1P47985 274 aa18.27■□□□□ 0.52
SPSB3-207ENST00000565550 ITGA1P56199 1179 aa18.27■□□□□ 0.52
SPSB3-207ENST00000565550 GSTM4Q03013 218 aa18.27■□□□□ 0.52
SPSB3-207ENST00000565550 ITIH4Q14624 930 aa18.27■□□□□ 0.52
SPSB3-207ENST00000565550 BRD3Q15059 726 aa18.27■□□□□ 0.52
SPSB3-207ENST00000565550 TRADDQ15628 312 aa18.27■□□□□ 0.52
SPSB3-207ENST00000565550 KIAA0930Q6ICG6 404 aaPredicted RBP18.27■□□□□ 0.52
SPSB3-207ENST00000565550 PACS1Q6VY07 963 aa18.27■□□□□ 0.52
SPSB3-207ENST00000565550 PCGF5Q86SE9 256 aa18.27■□□□□ 0.52
SPSB3-207ENST00000565550 HOOK3Q86VS8 718 aa18.27■□□□□ 0.52
SPSB3-207ENST00000565550 ZBTB2Q8N680 514 aa18.27■□□□□ 0.52
SPSB3-207ENST00000565550 FDCSPQ8NFU4 85 aa18.27■□□□□ 0.52
SPSB3-207ENST00000565550 OR5AR1Q8NGP9 310 aa18.27■□□□□ 0.52
SPSB3-207ENST00000565550 CPT1CQ8TCG5 803 aa18.27■□□□□ 0.52
SPSB3-207ENST00000565550 FAM60AQ9NP50 221 aa18.27■□□□□ 0.52
SPSB3-207ENST00000565550 ICKQ9UPZ9 632 aa18.27■□□□□ 0.52
SPSB3-207ENST00000565550 TNRC6AQ8NDV7 1962 aaKnown RBP18.27■□□□□ 0.52
SPSB3-207ENST00000565550 MED13Q9UHV7 2174 aa18.26■□□□□ 0.51
SPSB3-207ENST00000565550 CEACAM4O75871 244 aa18.26■□□□□ 0.51
SPSB3-207ENST00000565550 GNLYP22749 145 aa18.26■□□□□ 0.51
SPSB3-207ENST00000565550 DEKP35659 375 aaKnown RBP18.26■□□□□ 0.51
SPSB3-207ENST00000565550 NSG1P42857 185 aa18.26■□□□□ 0.51
SPSB3-207ENST00000565550 MORF4L2Q15014 288 aa18.26■□□□□ 0.51
SPSB3-207ENST00000565550 NCF4Q15080 339 aa18.26■□□□□ 0.51
SPSB3-207ENST00000565550 SPESP1Q6UW49 350 aa18.26■□□□□ 0.51
SPSB3-207ENST00000565550 UNC5AQ6ZN44 842 aa18.26■□□□□ 0.51
SPSB3-207ENST00000565550 TRIM73Q86UV7 250 aa18.26■□□□□ 0.51
SPSB3-207ENST00000565550 KRT222Q8N1A0 295 aa18.26■□□□□ 0.51
SPSB3-207ENST00000565550 ELMO1Q92556 727 aa18.26■□□□□ 0.51
SPSB3-207ENST00000565550 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.26■□□□□ 0.514e-13■■■■■ 88.3
SPSB3-207ENST00000565550 SGSM3Q96HU1 749 aa18.26■□□□□ 0.51
SPSB3-207ENST00000565550 PSMG3-AS1Q96PY0 264 aa18.26■□□□□ 0.51
SPSB3-207ENST00000565550 PLAC1Q9HBJ0 212 aa18.26■□□□□ 0.51
SPSB3-207ENST00000565550 ANAPC5Q9UJX4 755 aa18.26■□□□□ 0.51
SPSB3-207ENST00000565550 ASF1AQ9Y294 204 aa18.26■□□□□ 0.51
SPSB3-207ENST00000565550 ZNF451Q9Y4E5 1061 aa18.26■□□□□ 0.51
SPSB3-207ENST00000565550 MRFAP1Q9Y605 127 aa18.26■□□□□ 0.51
SPSB3-207ENST00000565550 SPENQ96T58 3664 aaKnown RBP18.25■□□□□ 0.51
SPSB3-207ENST00000565550 BLACEA4D250 179 aa18.25■□□□□ 0.51
SPSB3-207ENST00000565550 A6NL46 340 aa18.25■□□□□ 0.51
SPSB3-207ENST00000565550 LIN7AO14910 233 aaPredicted RBP18.25■□□□□ 0.51
SPSB3-207ENST00000565550 HBQ1P09105 142 aa18.25■□□□□ 0.51
SPSB3-207ENST00000565550 UGT2B7P16662 529 aa18.25■□□□□ 0.51
SPSB3-207ENST00000565550 AGXTP21549 392 aa18.25■□□□□ 0.51
SPSB3-207ENST00000565550 ACADLP28330 430 aa18.25■□□□□ 0.51
SPSB3-207ENST00000565550 CSE1LP55060 971 aaKnown RBP18.25■□□□□ 0.51
SPSB3-207ENST00000565550 SLC7A5Q01650 507 aa18.25■□□□□ 0.51
SPSB3-207ENST00000565550 FASTKD3Q14CZ7 662 aaKnown RBP18.25■□□□□ 0.51
SPSB3-207ENST00000565550 ZNF385CQ66K41 422 aaPredicted RBP18.25■□□□□ 0.51
SPSB3-207ENST00000565550 GPR135Q8IZ08 494 aa18.25■□□□□ 0.51
SPSB3-207ENST00000565550 C19orf47Q8N9M1 422 aaKnown RBP18.25■□□□□ 0.51
SPSB3-207ENST00000565550 GALNT11Q8NCW6 608 aa18.25■□□□□ 0.51
SPSB3-207ENST00000565550 N4BP2L2Q92802 583 aaPredicted RBP18.25■□□□□ 0.51
SPSB3-207ENST00000565550 OR2A14Q96R47 310 aa18.25■□□□□ 0.51
SPSB3-207ENST00000565550 DPH2Q9BQC3 489 aaPredicted RBP18.25■□□□□ 0.51
SPSB3-207ENST00000565550 ERP44Q9BS26 406 aa18.25■□□□□ 0.51
SPSB3-207ENST00000565550 GRHL1Q9NZI5 618 aa18.25■□□□□ 0.51
SPSB3-207ENST00000565550 CHMP2BQ9UQN3 213 aa18.25■□□□□ 0.51
SPSB3-207ENST00000565550 TDRKHQ9Y2W6 561 aaKnown RBP18.25■□□□□ 0.51
SPSB3-207ENST00000565550 MAP4K5Q9Y4K4 846 aa18.25■□□□□ 0.51
SPSB3-207ENST00000565550 PCDHGB7Q9Y5F8 929 aa18.25■□□□□ 0.51
SPSB3-207ENST00000565550 LRRK2Q5S007 2527 aa18.24■□□□□ 0.51
SPSB3-207ENST00000565550 FAM187AA6NFU0 413 aa18.24■□□□□ 0.51
SPSB3-207ENST00000565550 C9J4A7 227 aa18.24■□□□□ 0.51
SPSB3-207ENST00000565550 HCRTR1O43613 425 aa18.24■□□□□ 0.51
SPSB3-207ENST00000565550 SORBS2O94875 1100 aaKnown RBP18.24■□□□□ 0.51
SPSB3-207ENST00000565550 FTH1P02794 183 aa18.24■□□□□ 0.51
SPSB3-207ENST00000565550 TPBGLP0DKB5 382 aa18.24■□□□□ 0.51
SPSB3-207ENST00000565550 SHMT2P34897 504 aa18.24■□□□□ 0.51
SPSB3-207ENST00000565550 ELK3P41970 407 aa18.24■□□□□ 0.51
SPSB3-207ENST00000565550 CKAP4Q07065 602 aaKnown RBP18.24■□□□□ 0.51
SPSB3-207ENST00000565550 ATP1A4Q13733 1029 aa18.24■□□□□ 0.51
SPSB3-207ENST00000565550 ZIC1Q15915 447 aa18.24■□□□□ 0.51
SPSB3-207ENST00000565550 CTSL3PQ5NE16 218 aa18.24■□□□□ 0.51
SPSB3-207ENST00000565550 CENPUQ71F23 418 aa18.24■□□□□ 0.51
SPSB3-207ENST00000565550 MED25Q71SY5 747 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms