RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 TLX2O43763 284 aaPredicted RBP5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 SSX5O60225 188 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 CCNT1O60563 726 aaKnown RBP5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 GPC4O75487 556 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 CIB2O75838 187 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 CDKL5O76039 1030 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 SUN1O94901 812 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 TJP3O95049 919 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 ZNF202O95125 648 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 TSPAN15O95858 294 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 SERPINA3P01011 423 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 PGK2P07205 417 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 IQCF3P0C7M6 154 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 STAG3L3P0CL85 134 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 SLC2A4P14672 509 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 GJA1P17302 382 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 CKMT2P17540 419 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 ADRA1DP25100 572 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 PKLRP30613 574 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 TRHRP34981 398 aaPredicted RBP5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 ARL4AP40617 200 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 PEX5P50542 639 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 FOLH1Q04609 750 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 LIPEQ05469 1076 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 ZNF844Q08AG5 666 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 LCP2Q13094 533 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 GCNT6Q5T4J0 391 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 KCTD11Q693B1 232 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 LRRC8EQ6NSJ5 796 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 ARSKQ6UWY0 536 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 HTR3DQ70Z44 454 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 KRTAP1-3Q8IUG1 177 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 ZDHHC21Q8IVQ6 265 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 ZDHHC23Q8IYP9 409 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 HACE1Q8IYU2 909 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 FAM9CQ8IZT9 166 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 TRIM58Q8NG06 486 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 OR52B4Q8NGK2 314 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 OR8K3Q8NH51 312 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 CCDC12Q8WUD4 166 aaPredicted RBP5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 SLC20A1Q8WUM9 679 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 ATG4AQ8WYN0 398 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 DVL3Q92997 716 aaPredicted RBP5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 SLC7A6OSQ96CW6 309 aaPredicted RBP5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 SHISA4Q96DD7 197 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 TPD52L3Q96J77 140 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 SLC41A2Q96JW4 573 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 TMEM68Q96MH6 324 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 TOX2Q96NM4 488 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 LRRC3BQ96PB8 259 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 PLEKHG4BQ96PX9 1271 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 SEPT5Q99719 369 aaPredicted RBP5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 RIOK1Q9BRS2 568 aaKnown RBP5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 TMEM39BQ9GZU3 492 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 KCNMB3Q9NPA1 279 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 TBC1D13Q9NVG8 400 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 MTMR10Q9NXD2 777 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 NYAP2Q9P242 653 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 UBQLN2Q9UHD9 624 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 TSPAN16Q9UKR8 245 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 KIAA1257Q9ULG3 409 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 FAM96BQ9Y3D0 163 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 MAB21L2Q9Y586 359 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 ZHX2Q9Y6X8 837 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 H0Y8G0 127 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 K7EQM0 130 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 STRNO43815 780 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 DNAJB6O75190 326 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 CREG1O75629 220 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 SERPINC1P01008 464 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 HOXC6P09630 235 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 ALDOCP09972 364 aaKnown RBP5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 RALAP11233 206 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 PRDX6P30041 224 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 MEOX1P50221 254 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 BLKP51451 505 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 AIF1P55008 147 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 RRADP55042 308 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 BACE1P56817 501 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 PPP2R2BQ00005 443 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 LARS2Q15031 903 aaKnown RBP5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 ZNF124Q15973 351 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 TBR1Q16650 682 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 HIST2H2ACQ16777 129 aaPredicted RBP5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 SPOUT1Q5T280 376 aaKnown RBP5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 TXNRD3NBQ6F5E7 133 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 KLC3Q6P597 504 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 CTR9Q6PD62 1173 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 BLOC1S2Q6QNY1 142 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 QSOX2Q6ZRP7 698 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 LRRC70Q7Z2Q7 622 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 HAPLN4Q86UW8 402 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 EXOC3L1Q86VI1 746 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 ARID3BQ8IVW6 561 aaPredicted RBP5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 SIAH3Q8IW03 269 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 SRRM1Q8IYB3 904 aaKnown RBP5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 ADGRF3Q8IZF5 1079 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms