RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 BCKDHAP12694 445 aa13.65□□□□□ -0.22
VPS9D1-202ENST00000561976 ACVR2AP27037 513 aa13.65□□□□□ -0.22
VPS9D1-202ENST00000561976 SLC6A4P31645 630 aa13.65□□□□□ -0.22
VPS9D1-202ENST00000561976 ALDH7A1P49419 539 aaKnown RBP13.65□□□□□ -0.22
VPS9D1-202ENST00000561976 RGS4P49798 205 aa13.65□□□□□ -0.22
VPS9D1-202ENST00000561976 RPS24P62847 133 aaKnown RBP13.65□□□□□ -0.22
VPS9D1-202ENST00000561976 TWF1Q12792 350 aa13.65□□□□□ -0.22
VPS9D1-202ENST00000561976 KEAP1Q14145 624 aa13.65□□□□□ -0.22
VPS9D1-202ENST00000561976 VARS2Q5ST30 1063 aaKnown RBP13.65□□□□□ -0.22
VPS9D1-202ENST00000561976 OR2T5Q6IEZ7 315 aa13.65□□□□□ -0.22
VPS9D1-202ENST00000561976 CAPN13Q6MZZ7 669 aaPredicted RBP13.65□□□□□ -0.22
VPS9D1-202ENST00000561976 AHSA2Q719I0 299 aa13.65□□□□□ -0.22
VPS9D1-202ENST00000561976 HORMAD1Q86X24 394 aa13.65□□□□□ -0.22
VPS9D1-202ENST00000561976 CHPFQ8IZ52 775 aa13.65□□□□□ -0.22
VPS9D1-202ENST00000561976 OR2T29Q8NH02 315 aa13.65□□□□□ -0.22
VPS9D1-202ENST00000561976 RHOXF1Q8NHV9 184 aa13.65□□□□□ -0.22
VPS9D1-202ENST00000561976 PDLIM5Q96HC4 596 aaKnown RBP13.65□□□□□ -0.22
VPS9D1-202ENST00000561976 CPPED1Q9BRF8 314 aaPredicted RBP13.65□□□□□ -0.22
VPS9D1-202ENST00000561976 SLIRPQ9GZT3 109 aaKnown RBP13.65□□□□□ -0.22
VPS9D1-202ENST00000561976 CLPBQ9H078 707 aa13.65□□□□□ -0.22
VPS9D1-202ENST00000561976 PDP1Q9P0J1 537 aaPredicted RBP13.65□□□□□ -0.22
VPS9D1-202ENST00000561976 KIAA1522Q9P206 1035 aaPredicted RBP13.65□□□□□ -0.22
VPS9D1-202ENST00000561976 SAMD4AQ9UPU9 718 aaKnown RBP13.65□□□□□ -0.22
VPS9D1-202ENST00000561976 LOC730098B7Z3J9 87 aa13.64□□□□□ -0.23
VPS9D1-202ENST00000561976 B4GALT3O60512 393 aa13.64□□□□□ -0.23
VPS9D1-202ENST00000561976 IGLV3-27P01718 113 aa13.64□□□□□ -0.23
VPS9D1-202ENST00000561976 LCKP06239 509 aa13.64□□□□□ -0.23
VPS9D1-202ENST00000561976 SEPHS1P49903 392 aa13.64□□□□□ -0.23
VPS9D1-202ENST00000561976 FCGRTP55899 365 aa13.64□□□□□ -0.23
VPS9D1-202ENST00000561976 GBX1Q14549 363 aa13.64□□□□□ -0.23
VPS9D1-202ENST00000561976 PHKG1Q16816 387 aa13.64□□□□□ -0.23
VPS9D1-202ENST00000561976 MORN1Q5T089 497 aa13.64□□□□□ -0.23
VPS9D1-202ENST00000561976 NEK10Q6ZWH5 1172 aa13.64□□□□□ -0.23
VPS9D1-202ENST00000561976 USP50Q70EL3 339 aaPredicted RBP13.64□□□□□ -0.23
VPS9D1-202ENST00000561976 CALHM3Q86XJ0 350 aa13.64□□□□□ -0.23
VPS9D1-202ENST00000561976 SLC7A5P1Q8MH63 180 aa13.64□□□□□ -0.23
VPS9D1-202ENST00000561976 ATG16L2Q8NAA4 619 aa13.64□□□□□ -0.23
VPS9D1-202ENST00000561976 SEPT5Q99719 369 aaPredicted RBP13.64□□□□□ -0.23
VPS9D1-202ENST00000561976 GPR63Q9BZJ6 419 aa13.64□□□□□ -0.23
VPS9D1-202ENST00000561976 P2RY12Q9H244 342 aa13.64□□□□□ -0.23
VPS9D1-202ENST00000561976 KCNH6Q9H252 994 aa13.64□□□□□ -0.23
VPS9D1-202ENST00000561976 CCNB1IP1Q9NPC3 277 aa13.64□□□□□ -0.23
VPS9D1-202ENST00000561976 DOCK3Q8IZD9 2030 aa13.64□□□□□ -0.23
VPS9D1-202ENST00000561976 TRBV5-3A0A0A0MS03 114 aa13.64□□□□□ -0.23
VPS9D1-202ENST00000561976 MANBAO00462 879 aa13.64□□□□□ -0.23
VPS9D1-202ENST00000561976 AREL1O15033 823 aa13.64□□□□□ -0.23
VPS9D1-202ENST00000561976 KDELR3O43731 214 aa13.64□□□□□ -0.23
VPS9D1-202ENST00000561976 B3GALT4O96024 378 aa13.64□□□□□ -0.23
VPS9D1-202ENST00000561976 GLUD1P00367 558 aa13.64□□□□□ -0.23
VPS9D1-202ENST00000561976 CR2P20023 1033 aa13.64□□□□□ -0.23
VPS9D1-202ENST00000561976 CXCR4P61073 352 aa13.64□□□□□ -0.23
VPS9D1-202ENST00000561976 RPS14P62263 151 aaKnown RBP13.64□□□□□ -0.23
VPS9D1-202ENST00000561976 PHC1P78364 1004 aa13.64□□□□□ -0.23
VPS9D1-202ENST00000561976 MVKQ03426 396 aa13.64□□□□□ -0.23
VPS9D1-202ENST00000561976 CACNG1Q06432 222 aa13.64□□□□□ -0.23
VPS9D1-202ENST00000561976 RING1Q06587 406 aa13.64□□□□□ -0.23
VPS9D1-202ENST00000561976 SELENBP1Q13228 472 aa13.64□□□□□ -0.23
VPS9D1-202ENST00000561976 BCL2A1Q16548 175 aa13.64□□□□□ -0.23
VPS9D1-202ENST00000561976 PLEKHG6Q3KR16 790 aa13.64□□□□□ -0.23
VPS9D1-202ENST00000561976 CTXN3Q4LDR2 81 aa13.64□□□□□ -0.23
VPS9D1-202ENST00000561976 USP39Q53GS9 565 aaKnown RBP13.64□□□□□ -0.23
VPS9D1-202ENST00000561976 ZNF362Q5T0B9 420 aaPredicted RBP13.64□□□□□ -0.23
VPS9D1-202ENST00000561976 DOK6Q6PKX4 331 aa13.64□□□□□ -0.23
VPS9D1-202ENST00000561976 GALNT13Q8IUC8 556 aa13.64□□□□□ -0.23
VPS9D1-202ENST00000561976 CARNMT1Q8N4J0 409 aa13.64□□□□□ -0.23
VPS9D1-202ENST00000561976 CD244Q9BZW8 370 aa13.64□□□□□ -0.23
VPS9D1-202ENST00000561976 NACA2Q9H009 215 aa13.64□□□□□ -0.23
VPS9D1-202ENST00000561976 EPS8L2Q9H6S3 715 aa13.64□□□□□ -0.23
VPS9D1-202ENST00000561976 POU2F3Q9UKI9 436 aa13.64□□□□□ -0.23
VPS9D1-202ENST00000561976 HSPE1-MOB4S4R3N1 261 aa13.64□□□□□ -0.23
VPS9D1-202ENST00000561976 A0A096LPI6 279 aa13.63□□□□□ -0.23
VPS9D1-202ENST00000561976 OAZ2O95190 189 aa13.63□□□□□ -0.23
VPS9D1-202ENST00000561976 DLGAP3O95886 979 aa13.63□□□□□ -0.23
VPS9D1-202ENST00000561976 RHOCP08134 193 aa13.63□□□□□ -0.23
VPS9D1-202ENST00000561976 HOXB6P17509 224 aaKnown RBP13.63□□□□□ -0.23
VPS9D1-202ENST00000561976 GSSP48637 474 aa13.63□□□□□ -0.23
VPS9D1-202ENST00000561976 MGAT3Q09327 533 aa13.63□□□□□ -0.23
VPS9D1-202ENST00000561976 MAD2L1BPQ15013 274 aaPredicted RBP13.63□□□□□ -0.23
VPS9D1-202ENST00000561976 CPSF6Q16630 551 aaKnown RBP eCLIP13.63□□□□□ -0.23
VPS9D1-202ENST00000561976 SYT16Q17RD7 645 aa13.63□□□□□ -0.23
VPS9D1-202ENST00000561976 SERINC5Q86VE9 423 aa13.63□□□□□ -0.23
VPS9D1-202ENST00000561976 CHCHD4Q8N4Q1 142 aa13.63□□□□□ -0.23
VPS9D1-202ENST00000561976 POC5Q8NA72 575 aa13.63□□□□□ -0.23
VPS9D1-202ENST00000561976 UBE2FQ969M7 185 aa13.63□□□□□ -0.23
VPS9D1-202ENST00000561976 TSSK3Q96PN8 268 aa13.63□□□□□ -0.23
VPS9D1-202ENST00000561976 BTBD2Q9BX70 525 aa13.63□□□□□ -0.23
VPS9D1-202ENST00000561976 DCSTAMPQ9H295 470 aa13.63□□□□□ -0.23
VPS9D1-202ENST00000561976 KRT84Q9NSB2 600 aa13.63□□□□□ -0.23
VPS9D1-202ENST00000561976 Q9Y3F1 56 aa13.63□□□□□ -0.23
VPS9D1-202ENST00000561976 OARD1Q9Y530 152 aa13.63□□□□□ -0.23
VPS9D1-202ENST00000561976 PCDHB1Q9Y5F3 818 aa13.63□□□□□ -0.23
VPS9D1-202ENST00000561976 A8MU76 341 aa13.63□□□□□ -0.23
VPS9D1-202ENST00000561976 TBX1O43435 398 aa13.63□□□□□ -0.23
VPS9D1-202ENST00000561976 LRATO95237 230 aa13.63□□□□□ -0.23
VPS9D1-202ENST00000561976 CCNDBP1O95273 360 aa13.63□□□□□ -0.23
VPS9D1-202ENST00000561976 NTRK1P04629 796 aa13.63□□□□□ -0.23
VPS9D1-202ENST00000561976 EPB42P16452 691 aa13.63□□□□□ -0.23
VPS9D1-202ENST00000561976 IL1RNP18510 177 aa13.63□□□□□ -0.23
VPS9D1-202ENST00000561976 PSMA3P25788 255 aa13.63□□□□□ -0.23
VPS9D1-202ENST00000561976 EPHA2P29317 976 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms