RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 RAD1O60671 282 aa19.24■□□□□ 0.67
TSPAN3-210ENST00000561277 PSIP1O75475 530 aaKnown RBP19.24■□□□□ 0.67
TSPAN3-210ENST00000561277 TIAF1O95411 115 aa19.24■□□□□ 0.67
TSPAN3-210ENST00000561277 CATP04040 527 aaKnown RBP19.24■□□□□ 0.67
TSPAN3-210ENST00000561277 FGF5P12034 268 aa19.24■□□□□ 0.67
TSPAN3-210ENST00000561277 PGGT1BP53609 377 aa19.24■□□□□ 0.67
TSPAN3-210ENST00000561277 TMPRSS3P57727 454 aa19.24■□□□□ 0.67
TSPAN3-210ENST00000561277 CXADRP78310 365 aa19.24■□□□□ 0.67
TSPAN3-210ENST00000561277 TIAL1Q01085 375 aaKnown RBP eCLIP19.24■□□□□ 0.679e-7■□□□□ 9.8
TSPAN3-210ENST00000561277 NEK10Q6ZWH5 1172 aa19.24■□□□□ 0.67
TSPAN3-210ENST00000561277 FAM20CQ8IXL6 584 aa19.24■□□□□ 0.67
TSPAN3-210ENST00000561277 IL22RA1Q8N6P7 574 aa19.24■□□□□ 0.67
TSPAN3-210ENST00000561277 OR2L8Q8NGY9 312 aa19.24■□□□□ 0.67
TSPAN3-210ENST00000561277 FLVCR1-AS1Q8TAF5 88 aa19.24■□□□□ 0.67
TSPAN3-210ENST00000561277 DENND1AQ8TEH3 1009 aa19.24■□□□□ 0.67
TSPAN3-210ENST00000561277 LNPEPQ9UIQ6 1025 aa19.24■□□□□ 0.67
TSPAN3-210ENST00000561277 A0A0J9YY10 115 aa19.23■□□□□ 0.67
TSPAN3-210ENST00000561277 MAP3K7O43318 606 aa19.23■□□□□ 0.67
TSPAN3-210ENST00000561277 SPAG6O75602 509 aa19.23■□□□□ 0.67
TSPAN3-210ENST00000561277 MPC1LP0DKB6 136 aa19.23■□□□□ 0.67
TSPAN3-210ENST00000561277 CBSLP0DN79 551 aa19.23■□□□□ 0.67
TSPAN3-210ENST00000561277 CBSP35520 551 aa19.23■□□□□ 0.67
TSPAN3-210ENST00000561277 ATP1A2P50993 1020 aa19.23■□□□□ 0.67
TSPAN3-210ENST00000561277 UCNP55089 124 aa19.23■□□□□ 0.67
TSPAN3-210ENST00000561277 TUBB4BP68371 445 aa19.23■□□□□ 0.67
TSPAN3-210ENST00000561277 PDAP1Q13442 181 aaKnown RBP19.23■□□□□ 0.67
TSPAN3-210ENST00000561277 MANEAQ5SRI9 462 aa19.23■□□□□ 0.67
TSPAN3-210ENST00000561277 HECTD2Q5U5R9 776 aa19.23■□□□□ 0.67
TSPAN3-210ENST00000561277 PAQR3Q6TCH7 311 aa19.23■□□□□ 0.67
TSPAN3-210ENST00000561277 TIPARPQ7Z3E1 657 aaKnown RBP19.23■□□□□ 0.67
TSPAN3-210ENST00000561277 CACNA2D3Q8IZS8 1091 aa19.23■□□□□ 0.67
TSPAN3-210ENST00000561277 C19orf47Q8N9M1 422 aaKnown RBP19.23■□□□□ 0.67
TSPAN3-210ENST00000561277 NKD1Q969G9 470 aa19.23■□□□□ 0.67
TSPAN3-210ENST00000561277 CCNL2Q96S94 520 aaPredicted RBP19.23■□□□□ 0.67
TSPAN3-210ENST00000561277 PHACTR1Q9C0D0 580 aa19.23■□□□□ 0.67
TSPAN3-210ENST00000561277 SMYD2Q9NRG4 433 aa19.23■□□□□ 0.67
TSPAN3-210ENST00000561277 DMGDHQ9UI17 866 aaKnown RBP19.23■□□□□ 0.67
TSPAN3-210ENST00000561277 CORO1CQ9ULV4 474 aaPredicted RBP19.23■□□□□ 0.67
TSPAN3-210ENST00000561277 LOC400499M0QZD8 3231 aa19.23■□□□□ 0.67
TSPAN3-210ENST00000561277 KIAA0754O94854 1291 aa19.23■□□□□ 0.67
TSPAN3-210ENST00000561277 SYF2O95926 243 aaKnown RBP19.23■□□□□ 0.67
TSPAN3-210ENST00000561277 SAT1P21673 171 aa19.23■□□□□ 0.67
TSPAN3-210ENST00000561277 RGS4P49798 205 aa19.23■□□□□ 0.67
TSPAN3-210ENST00000561277 SLC5A12Q1EHB4 618 aa19.23■□□□□ 0.67
TSPAN3-210ENST00000561277 LARP7Q4G0J3 582 aaKnown RBP eCLIP19.23■□□□□ 0.67
TSPAN3-210ENST00000561277 FAM45BPQ6NSW5 357 aa19.23■□□□□ 0.67
TSPAN3-210ENST00000561277 C3orf62Q6ZUJ4 267 aa19.23■□□□□ 0.67
TSPAN3-210ENST00000561277 SLC26A11Q86WA9 606 aa19.23■□□□□ 0.67
TSPAN3-210ENST00000561277 NLGN4XQ8N0W4 816 aa19.23■□□□□ 0.67
TSPAN3-210ENST00000561277 NLGN4YQ8NFZ3 816 aaPredicted RBP19.23■□□□□ 0.67
TSPAN3-210ENST00000561277 OR9A1PQ8NGU1 263 aa19.23■□□□□ 0.67
TSPAN3-210ENST00000561277 FAM45AQ8TCE6 357 aa19.23■□□□□ 0.67
TSPAN3-210ENST00000561277 EEF1AKMT1Q8WVE0 214 aa19.23■□□□□ 0.67
TSPAN3-210ENST00000561277 SEC14L1Q92503 715 aa19.23■□□□□ 0.67
TSPAN3-210ENST00000561277 SLC22A18Q96BI1 424 aa19.23■□□□□ 0.67
TSPAN3-210ENST00000561277 ZNF501Q96CX3 271 aaPredicted RBP19.23■□□□□ 0.67
TSPAN3-210ENST00000561277 OLFM1Q99784 485 aa19.23■□□□□ 0.67
TSPAN3-210ENST00000561277 TWSG1Q9GZX9 223 aa19.23■□□□□ 0.67
TSPAN3-210ENST00000561277 FANCEQ9HB96 536 aa19.23■□□□□ 0.67
TSPAN3-210ENST00000561277 ZDHHC18Q9NUE0 388 aa19.23■□□□□ 0.67
TSPAN3-210ENST00000561277 SPATA7Q9P0W8 599 aa19.23■□□□□ 0.67
TSPAN3-210ENST00000561277 KLHL20Q9Y2M5 609 aa19.23■□□□□ 0.67
TSPAN3-210ENST00000561277 TMEM184BQ9Y519 407 aaPredicted RBP19.23■□□□□ 0.67
TSPAN3-210ENST00000561277 PTPRQQ9UMZ3 2332 aa19.22■□□□□ 0.67
TSPAN3-210ENST00000561277 TCRBV9S1A1TA0A576 114 aa19.22■□□□□ 0.67
TSPAN3-210ENST00000561277 DLGAP3O95886 979 aa19.22■□□□□ 0.67
TSPAN3-210ENST00000561277 MAP4P27816 1152 aaKnown RBP19.22■□□□□ 0.67
TSPAN3-210ENST00000561277 SKIV2L2P42285 1042 aaKnown RBP19.22■□□□□ 0.67
TSPAN3-210ENST00000561277 MAGEA4P43358 317 aa19.22■□□□□ 0.67
TSPAN3-210ENST00000561277 GPX6P59796 221 aa19.22■□□□□ 0.67
TSPAN3-210ENST00000561277 ARHGAP40Q5TG30 622 aa19.22■□□□□ 0.67
TSPAN3-210ENST00000561277 PWWP2BQ6NUJ5 590 aa19.22■□□□□ 0.67
TSPAN3-210ENST00000561277 CYHR1Q6ZMK1 362 aa19.22■□□□□ 0.67
TSPAN3-210ENST00000561277 CCDC81Q6ZN84 652 aa19.22■□□□□ 0.67
TSPAN3-210ENST00000561277 ZC3HC1Q86WB0 502 aaKnown RBP19.22■□□□□ 0.67
TSPAN3-210ENST00000561277 CEP112Q8N8E3 955 aa19.22■□□□□ 0.67
TSPAN3-210ENST00000561277 ASB11Q8WXH4 323 aa19.22■□□□□ 0.67
TSPAN3-210ENST00000561277 CDKL2Q92772 493 aa19.22■□□□□ 0.67
TSPAN3-210ENST00000561277 LINGO1Q96FE5 620 aa19.22■□□□□ 0.67
TSPAN3-210ENST00000561277 SPRY4Q9C004 299 aa19.22■□□□□ 0.67
TSPAN3-210ENST00000561277 NSMCE4AQ9NXX6 385 aa19.22■□□□□ 0.67
TSPAN3-210ENST00000561277 CAMSAP3Q9P1Y5 1249 aaPredicted RBP19.22■□□□□ 0.67
TSPAN3-210ENST00000561277 CXorf49A8MYA2 514 aaPredicted RBP19.21■□□□□ 0.67
TSPAN3-210ENST00000561277 TMEM150CB9EJG8 249 aa19.21■□□□□ 0.67
TSPAN3-210ENST00000561277 MYO1CO00159 1063 aa19.21■□□□□ 0.67
TSPAN3-210ENST00000561277 MAGP20916 626 aa19.21■□□□□ 0.67
TSPAN3-210ENST00000561277 PSMB5P28074 263 aa19.21■□□□□ 0.67
TSPAN3-210ENST00000561277 TSTA3Q13630 321 aaPredicted RBP19.21■□□□□ 0.67
TSPAN3-210ENST00000561277 FASTKQ14296 549 aaKnown RBP19.21■□□□□ 0.67
TSPAN3-210ENST00000561277 SF1Q15637 639 aaKnown RBP19.21■□□□□ 0.67
TSPAN3-210ENST00000561277 ZIC1Q15915 447 aa19.21■□□□□ 0.67
TSPAN3-210ENST00000561277 DEFB110Q30KQ9 67 aa19.21■□□□□ 0.67
TSPAN3-210ENST00000561277 CDHR3Q6ZTQ4 885 aa19.21■□□□□ 0.67
TSPAN3-210ENST00000561277 UBE2R2Q712K3 238 aaPredicted RBP19.21■□□□□ 0.67
TSPAN3-210ENST00000561277 TMEM126BQ8IUX1 230 aa19.21■□□□□ 0.67
TSPAN3-210ENST00000561277 MYO1HQ8N1T3 1032 aa19.21■□□□□ 0.67
TSPAN3-210ENST00000561277 GALNT6Q8NCL4 622 aa19.21■□□□□ 0.67
TSPAN3-210ENST00000561277 IFT81Q8WYA0 676 aa19.21■□□□□ 0.67
TSPAN3-210ENST00000561277 N4BP2L2Q92802 583 aaPredicted RBP19.21■□□□□ 0.67
TSPAN3-210ENST00000561277 PKP4Q99569 1192 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms