RNA–Protein interactions for RNA: ENST00000561059.5

PSME1-208, Transcript of proteasome activator subunit 1, humanhuman

TSL 2

Gene PSME1, Length 947 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME1-208ENST00000561059 AFTPHQ6ULP2 937 aa12.88□□□□□ -0.35
PSME1-208ENST00000561059 TTLL10Q6ZVT0 673 aa12.88□□□□□ -0.35
PSME1-208ENST00000561059 MCATQ8IVS2 390 aaKnown RBP12.88□□□□□ -0.35
PSME1-208ENST00000561059 CLEC1AQ8NC01 280 aa12.88□□□□□ -0.35
PSME1-208ENST00000561059 C1orf54Q8WWF1 131 aa12.88□□□□□ -0.35
PSME1-208ENST00000561059 RANBP9Q96S59 729 aa12.88□□□□□ -0.35
PSME1-208ENST00000561059 NDC1Q9BTX1 674 aa12.88□□□□□ -0.35
PSME1-208ENST00000561059 SLC29A3Q9BZD2 475 aa12.88□□□□□ -0.35
PSME1-208ENST00000561059 ZNF552Q9H707 407 aaPredicted RBP12.88□□□□□ -0.35
PSME1-208ENST00000561059 EURLQ9NYK6 297 aa12.88□□□□□ -0.35
PSME1-208ENST00000561059 MARCH4Q9P2E8 410 aaPredicted RBP12.88□□□□□ -0.35
PSME1-208ENST00000561059 NTNG1Q9Y2I2 539 aa12.88□□□□□ -0.35
PSME1-208ENST00000561059 CAPN6Q9Y6Q1 641 aa12.88□□□□□ -0.35
PSME1-208ENST00000561059 PIKFYVEQ9Y2I7 2098 aa12.88□□□□□ -0.35
PSME1-208ENST00000561059 ESPL1Q14674 2120 aa12.88□□□□□ -0.35
PSME1-208ENST00000561059 E7EVH7 732 aa12.87□□□□□ -0.35
PSME1-208ENST00000561059 PSMD3O43242 534 aa12.87□□□□□ -0.35
PSME1-208ENST00000561059 NRP2O60462 931 aa12.87□□□□□ -0.35
PSME1-208ENST00000561059 ZSCAN5DPP0CG00 497 aa12.87□□□□□ -0.35
PSME1-208ENST00000561059 PSMA3P25788 255 aa12.87□□□□□ -0.35
PSME1-208ENST00000561059 ITGA3P26006 1051 aa12.87□□□□□ -0.35
PSME1-208ENST00000561059 RAB28P51157 221 aa12.87□□□□□ -0.35
PSME1-208ENST00000561059 CRADDP78560 199 aa12.87□□□□□ -0.35
PSME1-208ENST00000561059 CDH17Q12864 832 aa12.87□□□□□ -0.35
PSME1-208ENST00000561059 MYBPC3Q14896 1274 aa12.87□□□□□ -0.35
PSME1-208ENST00000561059 KIR2DS3Q14952 304 aa12.87□□□□□ -0.35
PSME1-208ENST00000561059 HIF1AQ16665 826 aa12.87□□□□□ -0.35
PSME1-208ENST00000561059 CYP2A13Q16696 494 aa12.87□□□□□ -0.35
PSME1-208ENST00000561059 CCSMST1Q4G0I0 132 aa12.87□□□□□ -0.35
PSME1-208ENST00000561059 ZNF787Q6DD87 383 aa12.87□□□□□ -0.35
PSME1-208ENST00000561059 MRPL14Q6P1L8 145 aaKnown RBP12.87□□□□□ -0.35
PSME1-208ENST00000561059 LINC00523Q86TU6 105 aa12.87□□□□□ -0.35
PSME1-208ENST00000561059 CUZD1Q86UP6 607 aa12.87□□□□□ -0.35
PSME1-208ENST00000561059 IQCKQ8N0W5 287 aa12.87□□□□□ -0.35
PSME1-208ENST00000561059 OR4L1Q8NH43 312 aa12.87□□□□□ -0.35
PSME1-208ENST00000561059 PROKR1Q8TCW9 393 aa12.87□□□□□ -0.35
PSME1-208ENST00000561059 PTERQ96BW5 349 aa12.87□□□□□ -0.35
PSME1-208ENST00000561059 CALR3Q96L12 384 aaKnown RBP12.87□□□□□ -0.35
PSME1-208ENST00000561059 FER1L6-AS2Q96M78 137 aa12.87□□□□□ -0.35
PSME1-208ENST00000561059 C17orf62Q9BQA9 187 aa12.87□□□□□ -0.35
PSME1-208ENST00000561059 MENTQ9BUN1 341 aa12.87□□□□□ -0.35
PSME1-208ENST00000561059 AP1M1Q9BXS5 423 aa12.87□□□□□ -0.35
PSME1-208ENST00000561059 ILKAPQ9H0C8 392 aaPredicted RBP12.87□□□□□ -0.35
PSME1-208ENST00000561059 SOX17Q9H6I2 414 aaPredicted RBP12.87□□□□□ -0.35
PSME1-208ENST00000561059 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.87□□□□□ -0.35
PSME1-208ENST00000561059 STOX2Q9P2F5 926 aaPredicted RBP12.87□□□□□ -0.35
PSME1-208ENST00000561059 ERRFI1Q9UJM3 462 aaPredicted RBP12.87□□□□□ -0.35
PSME1-208ENST00000561059 FBXL4Q9UKA2 621 aa12.87□□□□□ -0.35
PSME1-208ENST00000561059 B3GNT3Q9Y2A9 372 aa12.87□□□□□ -0.35
PSME1-208ENST00000561059 DOPEY1Q5JWR5 2465 aa12.87□□□□□ -0.35
PSME1-208ENST00000561059 HIVEP3Q5T1R4 2406 aa12.87□□□□□ -0.35
PSME1-208ENST00000561059 HEATR9A2RTY3 570 aa12.86□□□□□ -0.35
PSME1-208ENST00000561059 MIF4GDA9UHW6 222 aaKnown RBP12.86□□□□□ -0.35
PSME1-208ENST00000561059 QSOX1O00391 747 aa12.86□□□□□ -0.35
PSME1-208ENST00000561059 LIASO43766 372 aa12.86□□□□□ -0.35
PSME1-208ENST00000561059 CBX6O95503 412 aa12.86□□□□□ -0.35
PSME1-208ENST00000561059 CLDN1O95832 211 aa12.86□□□□□ -0.35
PSME1-208ENST00000561059 PSMB5P28074 263 aa12.86□□□□□ -0.35
PSME1-208ENST00000561059 BDKRB1P46663 353 aa12.86□□□□□ -0.35
PSME1-208ENST00000561059 OR1D4P47884 311 aa12.86□□□□□ -0.35
PSME1-208ENST00000561059 GLRBP48167 497 aa12.86□□□□□ -0.35
PSME1-208ENST00000561059 PRAMEP78395 509 aa12.86□□□□□ -0.35
PSME1-208ENST00000561059 GRB7Q14451 532 aa12.86□□□□□ -0.35
PSME1-208ENST00000561059 FASTKD1Q53R41 847 aaKnown RBP12.86□□□□□ -0.35
PSME1-208ENST00000561059 LYPLAL1Q5VWZ2 237 aa12.86□□□□□ -0.35
PSME1-208ENST00000561059 FCRL6Q6DN72 434 aa12.86□□□□□ -0.35
PSME1-208ENST00000561059 TLDC1Q6P9B6 456 aa12.86□□□□□ -0.35
PSME1-208ENST00000561059 SPNS2Q8IVW8 549 aa12.86□□□□□ -0.35
PSME1-208ENST00000561059 PRSS58Q8IYP2 241 aa12.86□□□□□ -0.35
PSME1-208ENST00000561059 SLC22A15Q8IZD6 547 aa12.86□□□□□ -0.35
PSME1-208ENST00000561059 MRFAP1L1Q96HT8 127 aa12.86□□□□□ -0.35
PSME1-208ENST00000561059 BAG1Q99933 345 aaPredicted RBP12.86□□□□□ -0.35
PSME1-208ENST00000561059 SLC6A20Q9NP91 592 aa12.86□□□□□ -0.35
PSME1-208ENST00000561059 RAB6BQ9NRW1 208 aa12.86□□□□□ -0.35
PSME1-208ENST00000561059 C5AR2Q9P296 337 aa12.86□□□□□ -0.35
PSME1-208ENST00000561059 CTSFQ9UBX1 484 aa12.86□□□□□ -0.35
PSME1-208ENST00000561059 CDC23Q9UJX2 597 aa12.86□□□□□ -0.35
PSME1-208ENST00000561059 SRPK3Q9UPE1 567 aa12.86□□□□□ -0.35
PSME1-208ENST00000561059 ZNF148Q9UQR1 794 aa12.86□□□□□ -0.35
PSME1-208ENST00000561059 TCAF1Q9Y4C2 921 aa12.86□□□□□ -0.35
PSME1-208ENST00000561059 NFS1Q9Y697 457 aa12.86□□□□□ -0.35
PSME1-208ENST00000561059 MAU2Q9Y6X3 613 aa12.86□□□□□ -0.35
PSME1-208ENST00000561059 CCDC88CQ9P219 2028 aa12.86□□□□□ -0.35
PSME1-208ENST00000561059 MED26O95402 600 aa12.85□□□□□ -0.35
PSME1-208ENST00000561059 GAS8O95995 478 aa12.85□□□□□ -0.35
PSME1-208ENST00000561059 ALPPP05187 535 aa12.85□□□□□ -0.35
PSME1-208ENST00000561059 APRTP07741 180 aa12.85□□□□□ -0.35
PSME1-208ENST00000561059 CD9P21926 228 aa12.85□□□□□ -0.35
PSME1-208ENST00000561059 TERF1P54274 439 aa12.85□□□□□ -0.35
PSME1-208ENST00000561059 SESN2P58004 480 aaPredicted RBP12.85□□□□□ -0.35
PSME1-208ENST00000561059 YBX1P67809 324 aaKnown RBP12.85□□□□□ -0.35
PSME1-208ENST00000561059 KIF5AQ12840 1032 aa12.85□□□□□ -0.35
PSME1-208ENST00000561059 SF1Q15637 639 aaKnown RBP12.85□□□□□ -0.35
PSME1-208ENST00000561059 OASLQ15646 514 aaKnown RBP12.85□□□□□ -0.35
PSME1-208ENST00000561059 DNAJC21Q5F1R6 531 aaKnown RBP12.85□□□□□ -0.35
PSME1-208ENST00000561059 FIGLAQ6QHK4 219 aa12.85□□□□□ -0.35
PSME1-208ENST00000561059 COX15Q7KZN9 410 aa12.85□□□□□ -0.35
PSME1-208ENST00000561059 TMEM139Q8IV31 216 aa12.85□□□□□ -0.35
PSME1-208ENST00000561059 PARP9Q8IXQ6 854 aa12.85□□□□□ -0.35
PSME1-208ENST00000561059 SYCE1Q8N0S2 351 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms