RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 CEP41Q9BYV8 373 aa8.38□□□□□ -1.07
CCDC33-209ENST00000560565 TOR3AQ9H497 397 aa8.38□□□□□ -1.07
CCDC33-209ENST00000560565 ALG9Q9H6U8 611 aa8.38□□□□□ -1.07
CCDC33-209ENST00000560565 SIAEQ9HAT2 523 aa8.38□□□□□ -1.07
CCDC33-209ENST00000560565 CYP4F12Q9HCS2 524 aa8.38□□□□□ -1.07
CCDC33-209ENST00000560565 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.38□□□□□ -1.07
CCDC33-209ENST00000560565 CRNNQ9UBG3 495 aaPredicted RBP8.38□□□□□ -1.07
CCDC33-209ENST00000560565 RNF112Q9ULX5 631 aa8.38□□□□□ -1.07
CCDC33-209ENST00000560565 YIPF1Q9Y548 306 aa8.38□□□□□ -1.07
CCDC33-209ENST00000560565 MYOFQ9NZM1 2061 aa8.38□□□□□ -1.07
CCDC33-209ENST00000560565 A0A1B0GTW7 788 aa8.37□□□□□ -1.07
CCDC33-209ENST00000560565 FAM149AA5PLN7 773 aa8.37□□□□□ -1.07
CCDC33-209ENST00000560565 DFFAO00273 331 aa8.37□□□□□ -1.07
CCDC33-209ENST00000560565 BCKDKO14874 412 aa8.37□□□□□ -1.07
CCDC33-209ENST00000560565 DPM1O60762 260 aa8.37□□□□□ -1.07
CCDC33-209ENST00000560565 CDK14O94921 469 aa8.37□□□□□ -1.07
CCDC33-209ENST00000560565 WISP3O95389 354 aaPredicted RBP8.37□□□□□ -1.07
CCDC33-209ENST00000560565 ANGPTL1O95841 491 aa8.37□□□□□ -1.07
CCDC33-209ENST00000560565 FGF1P05230 155 aa8.37□□□□□ -1.07
CCDC33-209ENST00000560565 POU2F2P09086 479 aa8.37□□□□□ -1.07
CCDC33-209ENST00000560565 ALDOCP09972 364 aaKnown RBP8.37□□□□□ -1.07
CCDC33-209ENST00000560565 NCF1P14598 390 aaPredicted RBP8.37□□□□□ -1.07
CCDC33-209ENST00000560565 ATF6P18850 670 aa8.37□□□□□ -1.07
CCDC33-209ENST00000560565 CES1P23141 567 aa8.37□□□□□ -1.07
CCDC33-209ENST00000560565 FSHRP23945 695 aa8.37□□□□□ -1.07
CCDC33-209ENST00000560565 IDUAP35475 653 aa8.37□□□□□ -1.07
CCDC33-209ENST00000560565 PIK3CGP48736 1102 aa8.37□□□□□ -1.07
CCDC33-209ENST00000560565 ATXN1P54253 815 aaKnown RBP8.37□□□□□ -1.07
CCDC33-209ENST00000560565 CDH13P55290 713 aa8.37□□□□□ -1.07
CCDC33-209ENST00000560565 PPP2R2BQ00005 443 aa8.37□□□□□ -1.07
CCDC33-209ENST00000560565 CTBSQ01459 385 aa8.37□□□□□ -1.07
CCDC33-209ENST00000560565 ACVR1Q04771 509 aa8.37□□□□□ -1.07
CCDC33-209ENST00000560565 VAC14Q08AM6 782 aa8.37□□□□□ -1.07
CCDC33-209ENST00000560565 ELP6Q0PNE2 266 aa8.37□□□□□ -1.07
CCDC33-209ENST00000560565 TAF10Q12962 218 aa8.37□□□□□ -1.07
CCDC33-209ENST00000560565 ABRQ12979 859 aa8.37□□□□□ -1.07
CCDC33-209ENST00000560565 SEMA3AQ14563 771 aa8.37□□□□□ -1.07
CCDC33-209ENST00000560565 TRIP4Q15650 581 aaPredicted RBP8.37□□□□□ -1.07
CCDC33-209ENST00000560565 PPP1R3AQ16821 1122 aa8.37□□□□□ -1.07
CCDC33-209ENST00000560565 TYSND1Q2T9J0 566 aa8.37□□□□□ -1.07
CCDC33-209ENST00000560565 ZNF404Q494X3 552 aa8.37□□□□□ -1.07
CCDC33-209ENST00000560565 XKR7Q5GH72 579 aa8.37□□□□□ -1.07
CCDC33-209ENST00000560565 OTUD3Q5T2D3 398 aaPredicted RBP8.37□□□□□ -1.07
CCDC33-209ENST00000560565 CACHD1Q5VU97 1274 aa8.37□□□□□ -1.07
CCDC33-209ENST00000560565 ATG9BQ674R7 924 aa8.37□□□□□ -1.07
CCDC33-209ENST00000560565 SULT1C3Q6IMI6 304 aa8.37□□□□□ -1.07
CCDC33-209ENST00000560565 SLC2A7Q6PXP3 512 aa8.37□□□□□ -1.07
CCDC33-209ENST00000560565 TSPYL5Q86VY4 417 aaPredicted RBP8.37□□□□□ -1.07
CCDC33-209ENST00000560565 TRIM69Q86WT6 500 aa8.37□□□□□ -1.07
CCDC33-209ENST00000560565 PHYKPLQ8IUZ5 450 aa8.37□□□□□ -1.07
CCDC33-209ENST00000560565 DENND6AQ8IWF6 608 aa8.37□□□□□ -1.07
CCDC33-209ENST00000560565 KIAA2013Q8IYS2 634 aa8.37□□□□□ -1.07
CCDC33-209ENST00000560565 CADM3Q8N126 398 aa8.37□□□□□ -1.07
CCDC33-209ENST00000560565 SIMC1Q8NDZ2 872 aa8.37□□□□□ -1.07
CCDC33-209ENST00000560565 ST13P5Q8NFI4 369 aaPredicted RBP8.37□□□□□ -1.07
CCDC33-209ENST00000560565 MCFD2Q8NI22 146 aa8.37□□□□□ -1.07
CCDC33-209ENST00000560565 C9orf43Q8TAL5 461 aaPredicted RBP8.37□□□□□ -1.07
CCDC33-209ENST00000560565 BLOC1S5Q8TDH9 187 aa8.37□□□□□ -1.07
CCDC33-209ENST00000560565 EDEM1Q92611 657 aa8.37□□□□□ -1.07
CCDC33-209ENST00000560565 TANKQ92844 425 aa8.37□□□□□ -1.07
CCDC33-209ENST00000560565 FAM162AQ96A26 154 aa8.37□□□□□ -1.07
CCDC33-209ENST00000560565 SLC47A1Q96FL8 570 aa8.37□□□□□ -1.07
CCDC33-209ENST00000560565 SLC39A13Q96H72 371 aa8.37□□□□□ -1.07
CCDC33-209ENST00000560565 ZNF382Q96SR6 550 aa8.37□□□□□ -1.07
CCDC33-209ENST00000560565 YIPF2Q9BWQ6 316 aa8.37□□□□□ -1.07
CCDC33-209ENST00000560565 SPATA9Q9BWV2 254 aa8.37□□□□□ -1.07
CCDC33-209ENST00000560565 NDEL1Q9GZM8 345 aa8.37□□□□□ -1.07
CCDC33-209ENST00000560565 CCDC90BQ9GZT6 254 aa8.37□□□□□ -1.07
CCDC33-209ENST00000560565 TKTL2Q9H0I9 626 aa8.37□□□□□ -1.07
CCDC33-209ENST00000560565 CRISPLD1Q9H336 500 aa8.37□□□□□ -1.07
CCDC33-209ENST00000560565 TPK1Q9H3S4 243 aa8.37□□□□□ -1.07
CCDC33-209ENST00000560565 DSN1Q9H410 356 aa8.37□□□□□ -1.07
CCDC33-209ENST00000560565 ATP13A3Q9H7F0 1226 aa8.37□□□□□ -1.07
CCDC33-209ENST00000560565 IL1RL2Q9HB29 575 aa8.37□□□□□ -1.07
CCDC33-209ENST00000560565 NMUR1Q9HB89 426 aa8.37□□□□□ -1.07
CCDC33-209ENST00000560565 RBM22Q9NW64 420 aaKnown RBP eCLIP8.37□□□□□ -1.07
CCDC33-209ENST00000560565 SMPD4Q9NXE4 827 aa8.37□□□□□ -1.07
CCDC33-209ENST00000560565 TRPM5Q9NZQ8 1165 aa8.37□□□□□ -1.07
CCDC33-209ENST00000560565 ZNF221Q9UK13 617 aa8.37□□□□□ -1.07
CCDC33-209ENST00000560565 RPS6KA6Q9UK32 745 aa8.37□□□□□ -1.07
CCDC33-209ENST00000560565 MAPRE3Q9UPY8 281 aa8.37□□□□□ -1.07
CCDC33-209ENST00000560565 SLC27A5Q9Y2P5 690 aa8.37□□□□□ -1.07
CCDC33-209ENST00000560565 ZFHX2Q9C0A1 2572 aaPredicted RBP8.37□□□□□ -1.07
CCDC33-209ENST00000560565 CACNA1HO95180 2353 aa8.36□□□□□ -1.07
CCDC33-209ENST00000560565 SYNJ2BP-COX16A0A087WUM0 186 aa8.36□□□□□ -1.07
CCDC33-209ENST00000560565 ELOVL7A1L3X0 281 aa8.36□□□□□ -1.07
CCDC33-209ENST00000560565 FAM220BPB1ANY3 271 aa8.36□□□□□ -1.07
CCDC33-209ENST00000560565 SUPT3HB4E1H0 165 aa8.36□□□□□ -1.07
CCDC33-209ENST00000560565 SLC28A1O00337 649 aa8.36□□□□□ -1.07
CCDC33-209ENST00000560565 PRMT5O14744 637 aaPredicted RBP8.36□□□□□ -1.07
CCDC33-209ENST00000560565 RAD51BO15315 384 aa8.36□□□□□ -1.07
CCDC33-209ENST00000560565 RGS14O43566 566 aa8.36□□□□□ -1.07
CCDC33-209ENST00000560565 VPS26AO75436 327 aa8.36□□□□□ -1.07
CCDC33-209ENST00000560565 ERN1O75460 977 aaKnown RBP8.36□□□□□ -1.07
CCDC33-209ENST00000560565 JRKO75564 520 aa8.36□□□□□ -1.07
CCDC33-209ENST00000560565 RPP40O75818 363 aaKnown RBP8.36□□□□□ -1.07
CCDC33-209ENST00000560565 LRIG2O94898 1065 aa8.36□□□□□ -1.07
CCDC33-209ENST00000560565 FGF19O95750 216 aa8.36□□□□□ -1.07
CCDC33-209ENST00000560565 IGLV3-27P01718 113 aa8.36□□□□□ -1.07
CCDC33-209ENST00000560565 ASGR2P07307 311 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 129.3 ms