RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 RABIFP47224 123 aa5.09□□□□□ -1.59
SPG11-220ENST00000559933 ADARP55265 1226 aaKnown RBP5.09□□□□□ -1.59
SPG11-220ENST00000559933 ACTR1AP61163 376 aa5.09□□□□□ -1.59
SPG11-220ENST00000559933 PPP2R2AP63151 447 aa5.09□□□□□ -1.59
SPG11-220ENST00000559933 RACK1P63244 317 aaKnown RBP5.09□□□□□ -1.59
SPG11-220ENST00000559933 ARHGAP8P85298 464 aa5.09□□□□□ -1.59
SPG11-220ENST00000559933 SLC18A2Q05940 514 aa5.09□□□□□ -1.59
SPG11-220ENST00000559933 SF3A3Q12874 501 aaKnown RBP eCLIP5.09□□□□□ -1.593e-6■□□□□ 9.9
SPG11-220ENST00000559933 ABRQ12979 859 aa5.09□□□□□ -1.59
SPG11-220ENST00000559933 COL9A2Q14055 689 aaPredicted RBP5.09□□□□□ -1.59
SPG11-220ENST00000559933 SIM2Q14190 667 aaPredicted RBP5.09□□□□□ -1.59
SPG11-220ENST00000559933 GBX1Q14549 363 aa5.09□□□□□ -1.59
SPG11-220ENST00000559933 RASA2Q15283 850 aa5.09□□□□□ -1.59
SPG11-220ENST00000559933 SHBQ15464 509 aa5.09□□□□□ -1.59
SPG11-220ENST00000559933 KIF19Q2TAC6 998 aa5.09□□□□□ -1.59
SPG11-220ENST00000559933 TECRLQ5HYJ1 363 aa5.09□□□□□ -1.59
SPG11-220ENST00000559933 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.09□□□□□ -1.59
SPG11-220ENST00000559933 LRRC8EQ6NSJ5 796 aa5.09□□□□□ -1.59
SPG11-220ENST00000559933 CYHR1Q6ZMK1 362 aa5.09□□□□□ -1.59
SPG11-220ENST00000559933 ATG14Q6ZNE5 492 aa5.09□□□□□ -1.59
SPG11-220ENST00000559933 ZCCHC23Q6ZST2 131 aa5.09□□□□□ -1.59
SPG11-220ENST00000559933 OTOAQ7RTW8 1153 aa5.09□□□□□ -1.59
SPG11-220ENST00000559933 TAX1BP1Q86VP1 789 aa5.09□□□□□ -1.59
SPG11-220ENST00000559933 ZNF761Q86XN6 746 aaPredicted RBP5.09□□□□□ -1.59
SPG11-220ENST00000559933 PHACTR4Q8IZ21 702 aa5.09□□□□□ -1.59
SPG11-220ENST00000559933 FSTL5Q8N475 847 aaPredicted RBP5.09□□□□□ -1.59
SPG11-220ENST00000559933 CCDC63Q8NA47 563 aa5.09□□□□□ -1.59
SPG11-220ENST00000559933 ZBTB44Q8NCP5 570 aa5.09□□□□□ -1.59
SPG11-220ENST00000559933 PHC3Q8NDX5 983 aa5.09□□□□□ -1.59
SPG11-220ENST00000559933 CADM4Q8NFZ8 388 aa5.09□□□□□ -1.59
SPG11-220ENST00000559933 OR5AR1Q8NGP9 310 aa5.09□□□□□ -1.59
SPG11-220ENST00000559933 GABPB2Q8TAK5 448 aaPredicted RBP5.09□□□□□ -1.59
SPG11-220ENST00000559933 DTX3LQ8TDB6 740 aa5.09□□□□□ -1.59
SPG11-220ENST00000559933 LMX1AQ8TE12 382 aa5.09□□□□□ -1.59
SPG11-220ENST00000559933 ASB11Q8WXH4 323 aa5.09□□□□□ -1.59
SPG11-220ENST00000559933 DNASE2BQ8WZ79 361 aa5.09□□□□□ -1.59
SPG11-220ENST00000559933 ESAMQ96AP7 390 aa5.09□□□□□ -1.59
SPG11-220ENST00000559933 MTBPQ96DY7 904 aa5.09□□□□□ -1.59
SPG11-220ENST00000559933 PRR11Q96HE9 360 aaPredicted RBP5.09□□□□□ -1.59
SPG11-220ENST00000559933 IL17FQ96PD4 163 aa5.09□□□□□ -1.59
SPG11-220ENST00000559933 SMC6Q96SB8 1091 aa5.09□□□□□ -1.59
SPG11-220ENST00000559933 TTC1Q99614 292 aa5.09□□□□□ -1.59
SPG11-220ENST00000559933 PAIP2Q9BPZ3 127 aaKnown RBP5.09□□□□□ -1.59
SPG11-220ENST00000559933 WWP1Q9H0M0 922 aa5.09□□□□□ -1.59
SPG11-220ENST00000559933 ACBD3Q9H3P7 528 aa5.09□□□□□ -1.59
SPG11-220ENST00000559933 COG4Q9H9E3 785 aa5.09□□□□□ -1.59
SPG11-220ENST00000559933 PPCSQ9HAB8 311 aa5.09□□□□□ -1.59
SPG11-220ENST00000559933 SPATS2LQ9NUQ6 558 aaKnown RBP5.09□□□□□ -1.59
SPG11-220ENST00000559933 FAM53CQ9NYF3 392 aa5.09□□□□□ -1.59
SPG11-220ENST00000559933 UTP6Q9NYH9 597 aaKnown RBP5.09□□□□□ -1.59
SPG11-220ENST00000559933 TAS2R13Q9NYV9 303 aa5.09□□□□□ -1.59
SPG11-220ENST00000559933 TBC1D29Q9UFV1 150 aa5.09□□□□□ -1.59
SPG11-220ENST00000559933 APOBEC3BQ9UH17 382 aaKnown RBP5.09□□□□□ -1.59
SPG11-220ENST00000559933 TLK1Q9UKI8 766 aa5.09□□□□□ -1.59
SPG11-220ENST00000559933 CORO1CQ9ULV4 474 aaPredicted RBP5.09□□□□□ -1.59
SPG11-220ENST00000559933 DMTF1Q9Y222 760 aa5.09□□□□□ -1.59
SPG11-220ENST00000559933 DHRS7Q9Y394 339 aa5.09□□□□□ -1.59
SPG11-220ENST00000559933 TDRD6O60522 2096 aaKnown RBP5.09□□□□□ -1.59
SPG11-220ENST00000559933 ZFC3H1O60293 1989 aaKnown RBP5.09□□□□□ -1.6
SPG11-220ENST00000559933 PCDH15Q96QU1 1955 aa5.09□□□□□ -1.6
SPG11-220ENST00000559933 CHD8Q9HCK8 2581 aa5.09□□□□□ -1.6
SPG11-220ENST00000559933 A0A087X1B8 175 aa5.08□□□□□ -1.6
SPG11-220ENST00000559933 CCDC163A0A0D9SF12 145 aa5.08□□□□□ -1.6
SPG11-220ENST00000559933 ANKRD33BA6NCL7 494 aa5.08□□□□□ -1.6
SPG11-220ENST00000559933 MGAT4DA6NG13 374 aa5.08□□□□□ -1.6
SPG11-220ENST00000559933 PDZK1P1A8MUH7 402 aa5.08□□□□□ -1.6
SPG11-220ENST00000559933 ARHGEF33A8MVX0 844 aa5.08□□□□□ -1.6
SPG11-220ENST00000559933 HMGB1P1B2RPK0 211 aaPredicted RBP5.08□□□□□ -1.6
SPG11-220ENST00000559933 B4DGG1 531 aa5.08□□□□□ -1.6
SPG11-220ENST00000559933 SUPT3HB4E1H0 165 aa5.08□□□□□ -1.6
SPG11-220ENST00000559933 G3V2L1 256 aa5.08□□□□□ -1.6
SPG11-220ENST00000559933 PFDN6O15212 129 aa5.08□□□□□ -1.6
SPG11-220ENST00000559933 KMOO15229 486 aa5.08□□□□□ -1.6
SPG11-220ENST00000559933 FFAR2O15552 330 aa5.08□□□□□ -1.6
SPG11-220ENST00000559933 PRPF4O43172 522 aaKnown RBP eCLIP5.08□□□□□ -1.6
SPG11-220ENST00000559933 ATP8B1O43520 1251 aa5.08□□□□□ -1.6
SPG11-220ENST00000559933 PLIN3O60664 434 aa5.08□□□□□ -1.6
SPG11-220ENST00000559933 SUPT3HO75486 399 aa5.08□□□□□ -1.6
SPG11-220ENST00000559933 GPC4O75487 556 aa5.08□□□□□ -1.6
SPG11-220ENST00000559933 KLHL2O95198 593 aa5.08□□□□□ -1.6
SPG11-220ENST00000559933 GUCA1CO95843 209 aa5.08□□□□□ -1.6
SPG11-220ENST00000559933 MPOP05164 745 aa5.08□□□□□ -1.6
SPG11-220ENST00000559933 APOA4P06727 396 aa5.08□□□□□ -1.6
SPG11-220ENST00000559933 PYGLP06737 847 aa5.08□□□□□ -1.6
SPG11-220ENST00000559933 TPBGLP0DKB5 382 aa5.08□□□□□ -1.6
SPG11-220ENST00000559933 CHN1P15882 459 aa5.08□□□□□ -1.6
SPG11-220ENST00000559933 TSPAN8P19075 237 aa5.08□□□□□ -1.6
SPG11-220ENST00000559933 PPARGP37231 505 aaPredicted RBP5.08□□□□□ -1.6
SPG11-220ENST00000559933 ETV4P43268 484 aa5.08□□□□□ -1.6
SPG11-220ENST00000559933 AGTR2P50052 363 aa5.08□□□□□ -1.6
SPG11-220ENST00000559933 CLCNKAP51800 687 aa5.08□□□□□ -1.6
SPG11-220ENST00000559933 AFF3P51826 1226 aaKnown RBP5.08□□□□□ -1.6
SPG11-220ENST00000559933 MAZP56270 477 aaKnown RBP5.08□□□□□ -1.6
SPG11-220ENST00000559933 C21orf59P57076 290 aa5.08□□□□□ -1.6
SPG11-220ENST00000559933 RPS26P62854 115 aaKnown RBP5.08□□□□□ -1.6
SPG11-220ENST00000559933 GUCY1A3Q02108 690 aa5.08□□□□□ -1.6
SPG11-220ENST00000559933 GRIK2Q13002 908 aa5.08□□□□□ -1.6
SPG11-220ENST00000559933 PRKG2Q13237 762 aa5.08□□□□□ -1.6
SPG11-220ENST00000559933 IKZF1Q13422 519 aa5.08□□□□□ -1.6
SPG11-220ENST00000559933 CLCA4Q14CN2 919 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms