RNA–Protein interactions for RNA: ENST00000559834.1

HDDC3-204, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,076 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-204ENST00000559834 RELNP78509 3460 aa8.81□□□□□ -1
HDDC3-204ENST00000559834 ANKRD12Q6UB98 2062 aa8.81□□□□□ -1
HDDC3-204ENST00000559834 SRPX2O60687 465 aaPredicted RBP8.81□□□□□ -1
HDDC3-204ENST00000559834 CNOT3O75175 753 aaKnown RBP8.81□□□□□ -1
HDDC3-204ENST00000559834 FKBP9O95302 570 aa8.81□□□□□ -1
HDDC3-204ENST00000559834 METTL18O95568 372 aa8.81□□□□□ -1
HDDC3-204ENST00000559834 S1PR4O95977 384 aa8.81□□□□□ -1
HDDC3-204ENST00000559834 APOA4P06727 396 aa8.81□□□□□ -1
HDDC3-204ENST00000559834 PRSS56P0CW18 603 aa8.81□□□□□ -1
HDDC3-204ENST00000559834 TPBGLP0DKB5 382 aa8.81□□□□□ -1
HDDC3-204ENST00000559834 CD9P21926 228 aa8.81□□□□□ -1
HDDC3-204ENST00000559834 STIP1P31948 543 aaKnown RBP8.81□□□□□ -1
HDDC3-204ENST00000559834 HSPA14Q0VDF9 509 aa8.81□□□□□ -1
HDDC3-204ENST00000559834 GRM7Q14831 915 aa8.81□□□□□ -1
HDDC3-204ENST00000559834 TLR1Q15399 786 aa8.81□□□□□ -1
HDDC3-204ENST00000559834 SF1Q15637 639 aaKnown RBP8.81□□□□□ -1
HDDC3-204ENST00000559834 B3GNTL1Q67FW5 361 aaPredicted RBP8.81□□□□□ -1
HDDC3-204ENST00000559834 FCRL6Q6DN72 434 aa8.81□□□□□ -1
HDDC3-204ENST00000559834 KCNMB4Q86W47 210 aa8.81□□□□□ -1
HDDC3-204ENST00000559834 RAB42Q8N4Z0 105 aa8.81□□□□□ -1
HDDC3-204ENST00000559834 TC2NQ8N9U0 490 aa8.81□□□□□ -1
HDDC3-204ENST00000559834 DNAAF3Q8N9W5 541 aa8.81□□□□□ -1
HDDC3-204ENST00000559834 TTC29Q8NA56 475 aaPredicted RBP8.81□□□□□ -1
HDDC3-204ENST00000559834 FAR1Q8WVX9 515 aa8.81□□□□□ -1
HDDC3-204ENST00000559834 ASZ1Q8WWH4 475 aa8.81□□□□□ -1
HDDC3-204ENST00000559834 ZUFSPQ96AP4 578 aa8.81□□□□□ -1
HDDC3-204ENST00000559834 MRFAP1L1Q96HT8 127 aa8.81□□□□□ -1
HDDC3-204ENST00000559834 LMF1Q96S06 567 aa8.81□□□□□ -1
HDDC3-204ENST00000559834 TRIM5Q9C035 493 aa8.81□□□□□ -1
HDDC3-204ENST00000559834 LHPPQ9H008 270 aa8.81□□□□□ -1
HDDC3-204ENST00000559834 SLC26A1Q9H2B4 701 aa8.81□□□□□ -1
HDDC3-204ENST00000559834 RUBCNLQ9H714 662 aa8.81□□□□□ -1
HDDC3-204ENST00000559834 SEMA3GQ9NS98 782 aa8.81□□□□□ -1
HDDC3-204ENST00000559834 CUTCQ9NTM9 273 aa8.81□□□□□ -1
HDDC3-204ENST00000559834 IMPACTQ9P2X3 320 aa8.81□□□□□ -1
HDDC3-204ENST00000559834 ANAPC5Q9UJX4 755 aa8.81□□□□□ -1
HDDC3-204ENST00000559834 FBXL4Q9UKA2 621 aa8.81□□□□□ -1
HDDC3-204ENST00000559834 SLC39A10Q9ULF5 831 aa8.81□□□□□ -1
HDDC3-204ENST00000559834 PLAGL1Q9UM63 463 aa8.81□□□□□ -1
HDDC3-204ENST00000559834 TFR2Q9UP52 801 aa8.81□□□□□ -1
HDDC3-204ENST00000559834 EPN1Q9Y6I3 576 aaPredicted RBP8.81□□□□□ -1
HDDC3-204ENST00000559834 HEATR9A2RTY3 570 aa8.8□□□□□ -1
HDDC3-204ENST00000559834 CCDC162PA2VCL2 907 aa8.8□□□□□ -1
HDDC3-204ENST00000559834 OR51F1A6NGY5 319 aa8.8□□□□□ -1
HDDC3-204ENST00000559834 ERI2A8K979 691 aaKnown RBP8.8□□□□□ -1
HDDC3-204ENST00000559834 BTNL10A8MVZ5 291 aa8.8□□□□□ -1
HDDC3-204ENST00000559834 TARM1B6A8C7 271 aa8.8□□□□□ -1
HDDC3-204ENST00000559834 MASP2O00187 686 aa8.8□□□□□ -1
HDDC3-204ENST00000559834 DSCR3O14972 297 aa8.8□□□□□ -1
HDDC3-204ENST00000559834 CTSBP07858 339 aa8.8□□□□□ -1
HDDC3-204ENST00000559834 EDN3P14138 238 aa8.8□□□□□ -1
HDDC3-204ENST00000559834 MAGP20916 626 aa8.8□□□□□ -1
HDDC3-204ENST00000559834 ADRA1DP25100 572 aa8.8□□□□□ -1
HDDC3-204ENST00000559834 PKLRP30613 574 aa8.8□□□□□ -1
HDDC3-204ENST00000559834 FOXN2P32314 431 aa8.8□□□□□ -1
HDDC3-204ENST00000559834 TSFMP43897 325 aaKnown RBP8.8□□□□□ -1
HDDC3-204ENST00000559834 CARSP49589 748 aaKnown RBP8.8□□□□□ -1
HDDC3-204ENST00000559834 CDH17Q12864 832 aa8.8□□□□□ -1
HDDC3-204ENST00000559834 CDC16Q13042 620 aa8.8□□□□□ -1
HDDC3-204ENST00000559834 ZNF169Q14929 603 aaPredicted RBP8.8□□□□□ -1
HDDC3-204ENST00000559834 RBBP7Q16576 425 aa8.8□□□□□ -1
HDDC3-204ENST00000559834 NKG7Q16617 165 aa8.8□□□□□ -1
HDDC3-204ENST00000559834 HIF1AQ16665 826 aa8.8□□□□□ -1
HDDC3-204ENST00000559834 TUBB8Q3ZCM7 444 aa8.8□□□□□ -1
HDDC3-204ENST00000559834 FIGLAQ6QHK4 219 aa8.8□□□□□ -1
HDDC3-204ENST00000559834 AFTPHQ6ULP2 937 aa8.8□□□□□ -1
HDDC3-204ENST00000559834 KIRREL2Q6UWL6 708 aa8.8□□□□□ -1
HDDC3-204ENST00000559834 IGFL2Q6UWQ7 119 aa8.8□□□□□ -1
HDDC3-204ENST00000559834 ISLR2Q6UXK2 745 aa8.8□□□□□ -1
HDDC3-204ENST00000559834 UNC5DQ6UXZ4 953 aa8.8□□□□□ -1
HDDC3-204ENST00000559834 NAPRTQ6XQN6 538 aa8.8□□□□□ -1
HDDC3-204ENST00000559834 NLRP9Q7RTR0 991 aa8.8□□□□□ -1
HDDC3-204ENST00000559834 DCUN1D3Q8IWE4 304 aa8.8□□□□□ -1
HDDC3-204ENST00000559834 PARP9Q8IXQ6 854 aa8.8□□□□□ -1
HDDC3-204ENST00000559834 SLC22A15Q8IZD6 547 aa8.8□□□□□ -1
HDDC3-204ENST00000559834 UBL4BQ8N7F7 174 aa8.8□□□□□ -1
HDDC3-204ENST00000559834 RNF214Q8ND24 703 aa8.8□□□□□ -1
HDDC3-204ENST00000559834 CFAP61Q8NHU2 1237 aa8.8□□□□□ -1
HDDC3-204ENST00000559834 GSDMBQ8TAX9 411 aa8.8□□□□□ -1
HDDC3-204ENST00000559834 GRHL3Q8TE85 626 aa8.8□□□□□ -1
HDDC3-204ENST00000559834 ALG3Q92685 438 aa8.8□□□□□ -1
HDDC3-204ENST00000559834 INPP5DQ92835 1189 aa8.8□□□□□ -1
HDDC3-204ENST00000559834 HDAC10Q969S8 669 aa8.8□□□□□ -1
HDDC3-204ENST00000559834 CNDP1Q96KN2 507 aa8.8□□□□□ -1
HDDC3-204ENST00000559834 CARD6Q9BX69 1037 aa8.8□□□□□ -1
HDDC3-204ENST00000559834 RAB11FIP5Q9BXF6 653 aa8.8□□□□□ -1
HDDC3-204ENST00000559834 ZBTB20Q9HC78 741 aaPredicted RBP8.8□□□□□ -1
HDDC3-204ENST00000559834 SLC6A20Q9NP91 592 aa8.8□□□□□ -1
HDDC3-204ENST00000559834 SLC22A11Q9NSA0 550 aa8.8□□□□□ -1
HDDC3-204ENST00000559834 AMFRQ9UKV5 643 aa8.8□□□□□ -1
HDDC3-204ENST00000559834 RIMKLBQ9ULI2 386 aa8.8□□□□□ -1
HDDC3-204ENST00000559834 NOVA2Q9UNW9 492 aaKnown RBP8.8□□□□□ -1
HDDC3-204ENST00000559834 MRFAP1Q9Y605 127 aa8.8□□□□□ -1
HDDC3-204ENST00000559834 MDC1Q14676 2089 aaKnown RBP8.8□□□□□ -1
HDDC3-204ENST00000559834 POLEQ07864 2286 aa8.8□□□□□ -1
HDDC3-204ENST00000559834 CNTRLQ7Z7A1 2325 aa8.8□□□□□ -1
HDDC3-204ENST00000559834 CCDC88CQ9P219 2028 aa8.8□□□□□ -1
HDDC3-204ENST00000559834 A0A1B0GUH1 482 aa8.79□□□□□ -1
HDDC3-204ENST00000559834 E7EVH7 732 aa8.79□□□□□ -1
HDDC3-204ENST00000559834 SOCS6O14544 535 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms