RNA–Protein interactions for RNA: ENST00000558925.1

USP3-209, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 501 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-209ENST00000558925 ARMC9Q7Z3E5 817 aa1.54□□□□□ -2.16
USP3-209ENST00000558925 PIGWQ7Z7B1 504 aa1.54□□□□□ -2.16
USP3-209ENST00000558925 LONP2Q86WA8 852 aa1.54□□□□□ -2.16
USP3-209ENST00000558925 COMMD2Q86X83 199 aa1.54□□□□□ -2.16
USP3-209ENST00000558925 SFR1Q86XK3 245 aa1.54□□□□□ -2.16
USP3-209ENST00000558925 KMT5CQ86Y97 462 aa1.54□□□□□ -2.16
USP3-209ENST00000558925 TMEM139Q8IV31 216 aa1.54□□□□□ -2.16
USP3-209ENST00000558925 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP1.54□□□□□ -2.16
USP3-209ENST00000558925 MAML2Q8IZL2 1156 aaPredicted RBP1.54□□□□□ -2.16
USP3-209ENST00000558925 CPSF7Q8N684 471 aaKnown RBP1.54□□□□□ -2.16
USP3-209ENST00000558925 TMCO5AQ8N6Q1 288 aa1.54□□□□□ -2.16
USP3-209ENST00000558925 KLHDC1Q8N7A1 406 aa1.54□□□□□ -2.16
USP3-209ENST00000558925 ARL10Q8N8L6 244 aa1.54□□□□□ -2.16
USP3-209ENST00000558925 THAP8Q8NA92 274 aa1.54□□□□□ -2.16
USP3-209ENST00000558925 ATAD1Q8NBU5 361 aa1.54□□□□□ -2.16
USP3-209ENST00000558925 MSANTD4Q8NCY6 345 aa1.54□□□□□ -2.16
USP3-209ENST00000558925 NPEPL1Q8NDH3 523 aa1.54□□□□□ -2.16
USP3-209ENST00000558925 OR10Q1Q8NGQ4 319 aa1.54□□□□□ -2.16
USP3-209ENST00000558925 SPATA20Q8TB22 786 aa1.54□□□□□ -2.16
USP3-209ENST00000558925 ELP5Q8TE02 316 aa1.54□□□□□ -2.16
USP3-209ENST00000558925 PIGBQ92521 554 aa1.54□□□□□ -2.16
USP3-209ENST00000558925 RAD54LQ92698 747 aa1.54□□□□□ -2.16
USP3-209ENST00000558925 RIT1Q92963 219 aa1.54□□□□□ -2.16
USP3-209ENST00000558925 PHF21BQ96EK2 531 aa1.54□□□□□ -2.16
USP3-209ENST00000558925 CDCA5Q96FF9 252 aa1.54□□□□□ -2.16
USP3-209ENST00000558925 HMCESQ96FZ2 354 aa1.54□□□□□ -2.16
USP3-209ENST00000558925 FAM20AQ96MK3 541 aa1.54□□□□□ -2.16
USP3-209ENST00000558925 PARK7Q99497 189 aaKnown RBP1.54□□□□□ -2.16
USP3-209ENST00000558925 NEURL2Q9BR09 285 aa1.54□□□□□ -2.16
USP3-209ENST00000558925 BTBD10Q9BSF8 475 aa1.54□□□□□ -2.16
USP3-209ENST00000558925 ACAT2Q9BWD1 397 aa1.54□□□□□ -2.16
USP3-209ENST00000558925 ARRDC1-AS1Q9H2J1 176 aa1.54□□□□□ -2.16
USP3-209ENST00000558925 FN3KQ9H479 309 aa1.54□□□□□ -2.16
USP3-209ENST00000558925 Q9H8V8 135 aa1.54□□□□□ -2.16
USP3-209ENST00000558925 TRPV4Q9HBA0 871 aa1.54□□□□□ -2.16
USP3-209ENST00000558925 CDH20Q9HBT6 801 aa1.54□□□□□ -2.16
USP3-209ENST00000558925 PHPT1Q9NRX4 125 aaPredicted RBP1.54□□□□□ -2.16
USP3-209ENST00000558925 SERINC1Q9NRX5 453 aa1.54□□□□□ -2.16
USP3-209ENST00000558925 GKN1Q9NS71 199 aa1.54□□□□□ -2.16
USP3-209ENST00000558925 IARS2Q9NSE4 1012 aaKnown RBP1.54□□□□□ -2.16
USP3-209ENST00000558925 SLC38A7Q9NVC3 462 aa1.54□□□□□ -2.16
USP3-209ENST00000558925 ERAP1Q9NZ08 941 aa1.54□□□□□ -2.16
USP3-209ENST00000558925 WWOXQ9NZC7 414 aa1.54□□□□□ -2.16
USP3-209ENST00000558925 FRMD4AQ9P2Q2 1039 aaPredicted RBP1.54□□□□□ -2.16
USP3-209ENST00000558925 ITGA11Q9UKX5 1188 aa1.54□□□□□ -2.16
USP3-209ENST00000558925 SNX7Q9UNH6 387 aa1.54□□□□□ -2.16
USP3-209ENST00000558925 VDAC3Q9Y277 283 aa1.54□□□□□ -2.16
USP3-209ENST00000558925 JRKLQ9Y4A0 524 aa1.54□□□□□ -2.16
USP3-209ENST00000558925 CGNL1Q0VF96 1302 aa1.54□□□□□ -2.16
USP3-209ENST00000558925 IGHV4OR15-8A0A075B7B6 117 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 SAA2-SAA4A0A096LPE2 208 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 A0A1W2PPW3 197 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 A0A1W2PRB8 838 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 A0A1W2PRV1 198 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 MED19A0JLT2 244 aaPredicted RBP1.53□□□□□ -2.16
USP3-209ENST00000558925 CTAGE9A4FU28 777 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 YDJCA8MPS7 323 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 ANKRD66B4E2M5 251 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 PRAC2D3DTV9 90 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 PRSS46E5RG02 174 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 PLOD2O00469 737 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 DVL1O14640 695 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 SLC30A4O14863 429 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 ZNF263O14978 683 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 CTDSPLO15194 276 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 STX6O43752 255 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 ATP6AP2O75787 350 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 DDHD2O94830 711 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 MOCS3O95396 460 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 BAG4O95429 457 aaKnown RBP1.53□□□□□ -2.16
USP3-209ENST00000558925 BAG3O95817 575 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 PLGP00747 810 aaPredicted RBP1.53□□□□□ -2.16
USP3-209ENST00000558925 MT-ND3P03897 115 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 ALPLP05186 524 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 NGFRP08138 427 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 INHBAP08476 426 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 SNRNP70P08621 437 aaKnown RBP1.53□□□□□ -2.16
USP3-209ENST00000558925 CTAGE8P0CG41 777 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 STAG3L1P0CL83 205 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 EPCAMP16422 314 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 ITIH1P19827 911 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 TCEA1P23193 301 aaKnown RBP1.53□□□□□ -2.16
USP3-209ENST00000558925 EEF1B2P24534 225 aaKnown RBP1.53□□□□□ -2.16
USP3-209ENST00000558925 EPHA2P29317 976 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 CCND3P30281 292 aaPredicted RBP1.53□□□□□ -2.16
USP3-209ENST00000558925 CDC25AP30304 524 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 ALDH1B1P30837 517 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 SERPINB6P35237 376 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 CDKN2AP42771 156 aaKnown RBP1.53□□□□□ -2.16
USP3-209ENST00000558925 RGS7P49802 495 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 PEX5P50542 639 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 ASCL1P50553 236 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 CDH11P55287 796 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 CLDN15P56746 228 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 NANOS2P60321 138 aaKnown RBP1.53□□□□□ -2.16
USP3-209ENST00000558925 DLK1P80370 383 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 GCNT1Q02742 428 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 UBXN1Q04323 297 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 EGR4Q05215 589 aa1.53□□□□□ -2.16
USP3-209ENST00000558925 LTBQ06643 244 aa1.53□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms