RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 PWWP2AQ96N64 755 aa12.07□□□□□ -0.48
SMAD3-208ENST00000558827 PANX3Q96QZ0 392 aa12.07□□□□□ -0.48
SMAD3-208ENST00000558827 NAP1L3Q99457 506 aaPredicted RBP12.07□□□□□ -0.48
SMAD3-208ENST00000558827 SLC30A3Q99726 388 aa12.07□□□□□ -0.48
SMAD3-208ENST00000558827 TRIM55Q9BYV6 548 aa12.07□□□□□ -0.48
SMAD3-208ENST00000558827 C20orf96Q9NUD7 363 aaPredicted RBP12.07□□□□□ -0.48
SMAD3-208ENST00000558827 OR6C2Q9NZP2 312 aa12.07□□□□□ -0.48
SMAD3-208ENST00000558827 DHCR7Q9UBM7 475 aaKnown RBP12.07□□□□□ -0.48
SMAD3-208ENST00000558827 ASIC3Q9UHC3 531 aa12.07□□□□□ -0.48
SMAD3-208ENST00000558827 POLHQ9Y253 713 aa12.07□□□□□ -0.48
SMAD3-208ENST00000558827 MAN2B2Q9Y2E5 1009 aa12.07□□□□□ -0.48
SMAD3-208ENST00000558827 KCNMB2Q9Y691 235 aa12.07□□□□□ -0.48
SMAD3-208ENST00000558827 FER1L5A0AVI2 2057 aa12.06□□□□□ -0.48
SMAD3-208ENST00000558827 TENM4Q6N022 2769 aa12.06□□□□□ -0.48
SMAD3-208ENST00000558827 GOLGA6L10A0A0M3HER8 536 aa12.06□□□□□ -0.48
SMAD3-208ENST00000558827 ARGFXA6NJG6 315 aa12.06□□□□□ -0.48
SMAD3-208ENST00000558827 NRP2O60462 931 aa12.06□□□□□ -0.48
SMAD3-208ENST00000558827 C1orf105O95561 183 aa12.06□□□□□ -0.48
SMAD3-208ENST00000558827 S1PR4O95977 384 aa12.06□□□□□ -0.48
SMAD3-208ENST00000558827 PKMP14618 531 aaKnown RBP12.06□□□□□ -0.48
SMAD3-208ENST00000558827 RPS3P23396 243 aaKnown RBP eCLIP12.06□□□□□ -0.48
SMAD3-208ENST00000558827 MCM3P25205 808 aa12.06□□□□□ -0.48
SMAD3-208ENST00000558827 GABRA4P48169 554 aa12.06□□□□□ -0.48
SMAD3-208ENST00000558827 CCL11P51671 97 aa12.06□□□□□ -0.48
SMAD3-208ENST00000558827 MRPS25P82663 173 aaKnown RBP12.06□□□□□ -0.48
SMAD3-208ENST00000558827 MPP1Q00013 466 aa12.06□□□□□ -0.48
SMAD3-208ENST00000558827 FASTKQ14296 549 aaKnown RBP12.06□□□□□ -0.48
SMAD3-208ENST00000558827 SF1Q15637 639 aaKnown RBP12.06□□□□□ -0.48
SMAD3-208ENST00000558827 TYSND1Q2T9J0 566 aa12.06□□□□□ -0.48
SMAD3-208ENST00000558827 TTC23LQ6PF05 361 aa12.06□□□□□ -0.48
SMAD3-208ENST00000558827 UNC5DQ6UXZ4 953 aa12.06□□□□□ -0.48
SMAD3-208ENST00000558827 DCUN1D3Q8IWE4 304 aa12.06□□□□□ -0.48
SMAD3-208ENST00000558827 GPR135Q8IZ08 494 aa12.06□□□□□ -0.48
SMAD3-208ENST00000558827 CARFQ8N187 725 aa12.06□□□□□ -0.48
SMAD3-208ENST00000558827 DNAJC22Q8N4W6 341 aa12.06□□□□□ -0.48
SMAD3-208ENST00000558827 NAT8LQ8N9F0 302 aa12.06□□□□□ -0.48
SMAD3-208ENST00000558827 MCUQ8NE86 351 aa12.06□□□□□ -0.48
SMAD3-208ENST00000558827 OR8K5Q8NH50 307 aa12.06□□□□□ -0.48
SMAD3-208ENST00000558827 C9orf43Q8TAL5 461 aaPredicted RBP12.06□□□□□ -0.48
SMAD3-208ENST00000558827 TCTN2Q96GX1 697 aa12.06□□□□□ -0.48
SMAD3-208ENST00000558827 SIGLEC10Q96LC7 697 aa12.06□□□□□ -0.48
SMAD3-208ENST00000558827 MIPEPQ99797 713 aa12.06□□□□□ -0.48
SMAD3-208ENST00000558827 MENTQ9BUN1 341 aa12.06□□□□□ -0.48
SMAD3-208ENST00000558827 ACAT2Q9BWD1 397 aa12.06□□□□□ -0.48
SMAD3-208ENST00000558827 IARS2Q9NSE4 1012 aaKnown RBP12.06□□□□□ -0.48
SMAD3-208ENST00000558827 STOX2Q9P2F5 926 aaPredicted RBP12.06□□□□□ -0.48
SMAD3-208ENST00000558827 TLK1Q9UKI8 766 aa12.06□□□□□ -0.48
SMAD3-208ENST00000558827 SNX7Q9UNH6 387 aa12.06□□□□□ -0.48
SMAD3-208ENST00000558827 TP53TG5Q9Y2B4 290 aa12.06□□□□□ -0.48
SMAD3-208ENST00000558827 ZCWPW2A0A1B0GU75 182 aa12.05□□□□□ -0.48
SMAD3-208ENST00000558827 FAM237BA0A1B0GVD1 139 aa12.05□□□□□ -0.48
SMAD3-208ENST00000558827 C21orf140B9A014 251 aa12.05□□□□□ -0.48
SMAD3-208ENST00000558827 E5RI56 91 aa12.05□□□□□ -0.48
SMAD3-208ENST00000558827 RASGRF2O14827 1237 aa12.05□□□□□ -0.48
SMAD3-208ENST00000558827 RPN2P04844 631 aa12.05□□□□□ -0.48
SMAD3-208ENST00000558827 CAPN1P07384 714 aa12.05□□□□□ -0.48
SMAD3-208ENST00000558827 SFTPCP11686 197 aa12.05□□□□□ -0.48
SMAD3-208ENST00000558827 PAMP19021 973 aa12.05□□□□□ -0.48
SMAD3-208ENST00000558827 ALAS2P22557 587 aa12.05□□□□□ -0.48
SMAD3-208ENST00000558827 RORAP35398 523 aa12.05□□□□□ -0.48
SMAD3-208ENST00000558827 KIR2DS3Q14952 304 aa12.05□□□□□ -0.48
SMAD3-208ENST00000558827 SLC5A12Q1EHB4 618 aa12.05□□□□□ -0.48
SMAD3-208ENST00000558827 KLHL38Q2WGJ6 581 aa12.05□□□□□ -0.48
SMAD3-208ENST00000558827 BBS9Q3SYG4 887 aa12.05□□□□□ -0.48
SMAD3-208ENST00000558827 MSS51Q4VC12 460 aa12.05□□□□□ -0.48
SMAD3-208ENST00000558827 HSP90AA5PQ58FG0 334 aa12.05□□□□□ -0.48
SMAD3-208ENST00000558827 FCRL6Q6DN72 434 aa12.05□□□□□ -0.48
SMAD3-208ENST00000558827 ZNF549Q6P9A3 640 aa12.05□□□□□ -0.48
SMAD3-208ENST00000558827 FIGLAQ6QHK4 219 aa12.05□□□□□ -0.48
SMAD3-208ENST00000558827 LRRC6Q86X45 466 aa12.05□□□□□ -0.48
SMAD3-208ENST00000558827 CILP2Q8IUL8 1156 aa12.05□□□□□ -0.48
SMAD3-208ENST00000558827 MCATQ8IVS2 390 aaKnown RBP12.05□□□□□ -0.48
SMAD3-208ENST00000558827 PPIL6Q8IXY8 311 aa12.05□□□□□ -0.48
SMAD3-208ENST00000558827 DTWD1Q8N5C7 304 aa12.05□□□□□ -0.48
SMAD3-208ENST00000558827 ZBTB2Q8N680 514 aa12.05□□□□□ -0.48
SMAD3-208ENST00000558827 METTL27Q8N6F8 245 aaPredicted RBP12.05□□□□□ -0.48
SMAD3-208ENST00000558827 OR2L8Q8NGY9 312 aa12.05□□□□□ -0.48
SMAD3-208ENST00000558827 GRK7Q8WTQ7 553 aa12.05□□□□□ -0.48
SMAD3-208ENST00000558827 GPR87Q9BY21 358 aa12.05□□□□□ -0.48
SMAD3-208ENST00000558827 ADNPQ9H2P0 1102 aa12.05□□□□□ -0.48
SMAD3-208ENST00000558827 XAB2Q9HCS7 855 aaKnown RBP12.05□□□□□ -0.48
SMAD3-208ENST00000558827 LATS2Q9NRM7 1088 aa12.05□□□□□ -0.48
SMAD3-208ENST00000558827 SLC17A6Q9P2U8 582 aa12.05□□□□□ -0.48
SMAD3-208ENST00000558827 NDOR1Q9UHB4 597 aa12.05□□□□□ -0.48
SMAD3-208ENST00000558827 PCDHGA6Q9Y5G7 932 aa12.05□□□□□ -0.48
SMAD3-208ENST00000558827 PCM1Q15154 2024 aa12.04□□□□□ -0.48
SMAD3-208ENST00000558827 ANKRD12Q6UB98 2062 aa12.04□□□□□ -0.48
SMAD3-208ENST00000558827 A6NL46 340 aa12.04□□□□□ -0.48
SMAD3-208ENST00000558827 ARHGEF33A8MVX0 844 aa12.04□□□□□ -0.48
SMAD3-208ENST00000558827 MASP2O00187 686 aa12.04□□□□□ -0.48
SMAD3-208ENST00000558827 SUV39H1O43463 412 aa12.04□□□□□ -0.48
SMAD3-208ENST00000558827 KDM1AO60341 852 aa12.04□□□□□ -0.48
SMAD3-208ENST00000558827 HAUS5O94927 633 aa12.04□□□□□ -0.48
SMAD3-208ENST00000558827 SYF2O95926 243 aaKnown RBP12.04□□□□□ -0.48
SMAD3-208ENST00000558827 ESR1P03372 595 aa12.04□□□□□ -0.48
SMAD3-208ENST00000558827 ERVK-10P10266 1014 aa12.04□□□□□ -0.48
SMAD3-208ENST00000558827 MLNP12872 115 aa12.04□□□□□ -0.48
SMAD3-208ENST00000558827 OGNP20774 298 aaKnown RBP12.04□□□□□ -0.48
SMAD3-208ENST00000558827 OTX2P32243 289 aa12.04□□□□□ -0.48
SMAD3-208ENST00000558827 SLC1A2P43004 574 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms