RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 L3MBTL4Q8NA19 623 aa12.6□□□□□ -0.39
SMAD3-207ENST00000558763 CCDC124Q96CT7 223 aaKnown RBP12.6□□□□□ -0.39
SMAD3-207ENST00000558763 HIC2Q96JB3 615 aa12.6□□□□□ -0.39
SMAD3-207ENST00000558763 TRIM54Q9BYV2 358 aa12.6□□□□□ -0.39
SMAD3-207ENST00000558763 SLC29A3Q9BZD2 475 aa12.6□□□□□ -0.39
SMAD3-207ENST00000558763 MBNL1Q9NR56 388 aaKnown RBP12.6□□□□□ -0.39
SMAD3-207ENST00000558763 RIC8BQ9NVN3 520 aa12.6□□□□□ -0.39
SMAD3-207ENST00000558763 SPATA6Q9NWH7 488 aaPredicted RBP12.6□□□□□ -0.39
SMAD3-207ENST00000558763 STOX2Q9P2F5 926 aaPredicted RBP12.6□□□□□ -0.39
SMAD3-207ENST00000558763 EBF1Q9UH73 591 aa12.6□□□□□ -0.39
SMAD3-207ENST00000558763 GPR34Q9UPC5 381 aa12.6□□□□□ -0.39
SMAD3-207ENST00000558763 SLC22A14Q9Y267 594 aa12.6□□□□□ -0.39
SMAD3-207ENST00000558763 NCKAP1Q9Y2A7 1128 aa12.6□□□□□ -0.39
SMAD3-207ENST00000558763 ANGPTL3Q9Y5C1 460 aa12.6□□□□□ -0.39
SMAD3-207ENST00000558763 ZDBF2Q9HCK1 2354 aa12.59□□□□□ -0.39
SMAD3-207ENST00000558763 USP34Q70CQ2 3546 aa12.59□□□□□ -0.39
SMAD3-207ENST00000558763 WDFY4Q6ZS81 3184 aa12.59□□□□□ -0.39
SMAD3-207ENST00000558763 FXYD1O00168 92 aa12.59□□□□□ -0.39
SMAD3-207ENST00000558763 MANBAO00462 879 aa12.59□□□□□ -0.39
SMAD3-207ENST00000558763 VEGFDO43915 354 aa12.59□□□□□ -0.39
SMAD3-207ENST00000558763 PCDH8O95206 1070 aa12.59□□□□□ -0.39
SMAD3-207ENST00000558763 APBB3O95704 486 aa12.59□□□□□ -0.39
SMAD3-207ENST00000558763 HIST1H2AGP0C0S8 130 aaPredicted RBP12.59□□□□□ -0.39
SMAD3-207ENST00000558763 HIST1H2ADP20671 130 aa12.59□□□□□ -0.39
SMAD3-207ENST00000558763 ITPKAP23677 461 aa12.59□□□□□ -0.39
SMAD3-207ENST00000558763 IMPA1P29218 277 aa12.59□□□□□ -0.39
SMAD3-207ENST00000558763 IL12AP29459 219 aa12.59□□□□□ -0.39
SMAD3-207ENST00000558763 HMOX2P30519 316 aa12.59□□□□□ -0.39
SMAD3-207ENST00000558763 ARL1P40616 181 aaPredicted RBP12.59□□□□□ -0.39
SMAD3-207ENST00000558763 CXCL12P48061 93 aa12.59□□□□□ -0.39
SMAD3-207ENST00000558763 ADPRHP54922 357 aa12.59□□□□□ -0.39
SMAD3-207ENST00000558763 RCN1Q15293 331 aa12.59□□□□□ -0.39
SMAD3-207ENST00000558763 TMEM259Q4ZIN3 620 aa12.59□□□□□ -0.39
SMAD3-207ENST00000558763 PDCD4Q53EL6 469 aaKnown RBP12.59□□□□□ -0.39
SMAD3-207ENST00000558763 HACD2Q6Y1H2 254 aa12.59□□□□□ -0.39
SMAD3-207ENST00000558763 KBTBD6Q86V97 674 aa12.59□□□□□ -0.39
SMAD3-207ENST00000558763 TP53I13Q8NBR0 393 aaPredicted RBP12.59□□□□□ -0.39
SMAD3-207ENST00000558763 FBXO15Q8NCQ5 510 aaPredicted RBP12.59□□□□□ -0.39
SMAD3-207ENST00000558763 ZNF514Q96K75 400 aaPredicted RBP12.59□□□□□ -0.39
SMAD3-207ENST00000558763 HIST1H2AHQ96KK5 128 aa12.59□□□□□ -0.39
SMAD3-207ENST00000558763 OR4K3Q96R72 315 aa12.59□□□□□ -0.39
SMAD3-207ENST00000558763 CDRT15Q96T59 188 aa12.59□□□□□ -0.39
SMAD3-207ENST00000558763 HIST1H2AJQ99878 128 aa12.59□□□□□ -0.39
SMAD3-207ENST00000558763 H2AFJQ9BTM1 129 aa12.59□□□□□ -0.39
SMAD3-207ENST00000558763 ATG10Q9H0Y0 220 aa12.59□□□□□ -0.39
SMAD3-207ENST00000558763 INTS7Q9NVH2 962 aaKnown RBP12.59□□□□□ -0.39
SMAD3-207ENST00000558763 MAP10Q9P2G4 905 aa12.59□□□□□ -0.39
SMAD3-207ENST00000558763 CYP8B1Q9UNU6 501 aa12.59□□□□□ -0.39
SMAD3-207ENST00000558763 TMEM98Q9Y2Y6 226 aa12.59□□□□□ -0.39
SMAD3-207ENST00000558763 PCM1Q15154 2024 aa12.58□□□□□ -0.39
SMAD3-207ENST00000558763 C17orf113A0A1B0GUU1 675 aa12.58□□□□□ -0.4
SMAD3-207ENST00000558763 NR5A2O00482 541 aa12.58□□□□□ -0.4
SMAD3-207ENST00000558763 MRASO14807 208 aa12.58□□□□□ -0.4
SMAD3-207ENST00000558763 PLRG1O43660 514 aaKnown RBP12.58□□□□□ -0.4
SMAD3-207ENST00000558763 CIB2O75838 187 aa12.58□□□□□ -0.4
SMAD3-207ENST00000558763 CLDN9O95484 217 aa12.58□□□□□ -0.4
SMAD3-207ENST00000558763 C1orf105O95561 183 aa12.58□□□□□ -0.4
SMAD3-207ENST00000558763 SLC16A8O95907 504 aa12.58□□□□□ -0.4
SMAD3-207ENST00000558763 PCCBP05166 539 aa12.58□□□□□ -0.4
SMAD3-207ENST00000558763 XRCC1P18887 633 aaPredicted RBP12.58□□□□□ -0.4
SMAD3-207ENST00000558763 CD22P20273 847 aa12.58□□□□□ -0.4
SMAD3-207ENST00000558763 ACADLP28330 430 aa12.58□□□□□ -0.4
SMAD3-207ENST00000558763 ACSL1P33121 698 aa12.58□□□□□ -0.4
SMAD3-207ENST00000558763 ERFP50548 548 aa12.58□□□□□ -0.4
SMAD3-207ENST00000558763 CCR3P51677 355 aa12.58□□□□□ -0.4
SMAD3-207ENST00000558763 PSME3P61289 254 aa12.58□□□□□ -0.4
SMAD3-207ENST00000558763 UFM1P61960 85 aa12.58□□□□□ -0.4
SMAD3-207ENST00000558763 YBX1P67809 324 aaKnown RBP12.58□□□□□ -0.4
SMAD3-207ENST00000558763 EMX2Q04743 252 aa12.58□□□□□ -0.4
SMAD3-207ENST00000558763 ATP6AP1LQ52LC2 224 aa12.58□□□□□ -0.4
SMAD3-207ENST00000558763 RFTN2Q52LD8 501 aaPredicted RBP12.58□□□□□ -0.4
SMAD3-207ENST00000558763 CRTC3Q6UUV7 619 aa12.58□□□□□ -0.4
SMAD3-207ENST00000558763 USP30Q70CQ3 517 aa12.58□□□□□ -0.4
SMAD3-207ENST00000558763 OR2L2Q8NH16 312 aa12.58□□□□□ -0.4
SMAD3-207ENST00000558763 CFAP61Q8NHU2 1237 aa12.58□□□□□ -0.4
SMAD3-207ENST00000558763 PROKR1Q8TCW9 393 aa12.58□□□□□ -0.4
SMAD3-207ENST00000558763 RLN3Q8WXF3 142 aa12.58□□□□□ -0.4
SMAD3-207ENST00000558763 PKP4Q99569 1192 aa12.58□□□□□ -0.4
SMAD3-207ENST00000558763 GPATCH1Q9BRR8 931 aaKnown RBP12.58□□□□□ -0.4
SMAD3-207ENST00000558763 TEX101Q9BY14 249 aa12.58□□□□□ -0.4
SMAD3-207ENST00000558763 MRPL1Q9BYD6 325 aaKnown RBP12.58□□□□□ -0.4
SMAD3-207ENST00000558763 OR52A5Q9H2C5 316 aa12.58□□□□□ -0.4
SMAD3-207ENST00000558763 EBF2Q9HAK2 575 aa12.58□□□□□ -0.4
SMAD3-207ENST00000558763 DNAJC11Q9NVH1 559 aa12.58□□□□□ -0.4
SMAD3-207ENST00000558763 NDE1Q9NXR1 346 aa12.58□□□□□ -0.4
SMAD3-207ENST00000558763 KLQ9UEF7 1012 aa12.58□□□□□ -0.4
SMAD3-207ENST00000558763 CIDEBQ9UHD4 219 aa12.58□□□□□ -0.4
SMAD3-207ENST00000558763 FZD4Q9ULV1 537 aa12.58□□□□□ -0.4
SMAD3-207ENST00000558763 BBIP1A8MTZ0 92 aa12.58□□□□□ -0.4
SMAD3-207ENST00000558763 E7ENX8 843 aa12.58□□□□□ -0.4
SMAD3-207ENST00000558763 H3BM21 787 aa12.58□□□□□ -0.4
SMAD3-207ENST00000558763 POP7O75817 140 aaKnown RBP12.58□□□□□ -0.4
SMAD3-207ENST00000558763 CATP04040 527 aaKnown RBP12.58□□□□□ -0.4
SMAD3-207ENST00000558763 TEAD1P28347 426 aa12.58□□□□□ -0.4
SMAD3-207ENST00000558763 TRIM23P36406 574 aa12.58□□□□□ -0.4
SMAD3-207ENST00000558763 HMGCS1Q01581 520 aa12.58□□□□□ -0.4
SMAD3-207ENST00000558763 PCDH1Q08174 1060 aa12.58□□□□□ -0.4
SMAD3-207ENST00000558763 ART3Q13508 389 aa12.58□□□□□ -0.4
SMAD3-207ENST00000558763 NFE2L1Q14494 772 aa12.58□□□□□ -0.4
SMAD3-207ENST00000558763 IRF4Q15306 451 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms