RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 MAP7D3Q8IWC1 876 aa1.62□□□□□ -2.15
HIF1A-212ENST00000557538 AMER3Q8N944 861 aa1.62□□□□□ -2.15
HIF1A-212ENST00000557538 ACVR1CQ8NER5 493 aa1.62□□□□□ -2.15
HIF1A-212ENST00000557538 OCC1Q8TAD7 63 aa1.62□□□□□ -2.15
HIF1A-212ENST00000557538 UTP15Q8TED0 518 aaKnown RBP1.62□□□□□ -2.15
HIF1A-212ENST00000557538 SLC20A1Q8WUM9 679 aa1.62□□□□□ -2.15
HIF1A-212ENST00000557538 TEKT4Q8WW24 435 aa1.62□□□□□ -2.15
HIF1A-212ENST00000557538 ARHGAP45Q92619 1136 aa1.62□□□□□ -2.15
HIF1A-212ENST00000557538 CNDP2Q96KP4 475 aaKnown RBP1.62□□□□□ -2.15
HIF1A-212ENST00000557538 SEMA3CQ99985 751 aa1.62□□□□□ -2.15
HIF1A-212ENST00000557538 NTMT1Q9BV86 223 aa1.62□□□□□ -2.15
HIF1A-212ENST00000557538 TSGA10Q9BZW7 698 aa1.62□□□□□ -2.15
HIF1A-212ENST00000557538 FTOQ9C0B1 505 aaKnown RBP eCLIP1.62□□□□□ -2.15
HIF1A-212ENST00000557538 C2orf40Q9H1Z8 148 aa1.62□□□□□ -2.15
HIF1A-212ENST00000557538 SLA2Q9H6Q3 261 aa1.62□□□□□ -2.15
HIF1A-212ENST00000557538 SLC28A3Q9HAS3 691 aa1.62□□□□□ -2.15
HIF1A-212ENST00000557538 FLRT3Q9NZU0 649 aa1.62□□□□□ -2.15
HIF1A-212ENST00000557538 CDH7Q9ULB5 785 aa1.62□□□□□ -2.15
HIF1A-212ENST00000557538 VDAC3Q9Y277 283 aa1.62□□□□□ -2.15
HIF1A-212ENST00000557538 R3HDM2Q9Y2K5 976 aaKnown RBP1.62□□□□□ -2.15
HIF1A-212ENST00000557538 MTF2Q9Y483 593 aaPredicted RBP1.62□□□□□ -2.15
HIF1A-212ENST00000557538 JRKLQ9Y4A0 524 aa1.62□□□□□ -2.15
HIF1A-212ENST00000557538 INSL5Q9Y5Q6 135 aa1.62□□□□□ -2.15
HIF1A-212ENST00000557538 BAZ1BQ9UIG0 1483 aaKnown RBP1.62□□□□□ -2.15
HIF1A-212ENST00000557538 MAP3K19Q56UN5 1328 aa1.62□□□□□ -2.15
HIF1A-212ENST00000557538 MROH5Q6ZUA9 1318 aa1.62□□□□□ -2.15
HIF1A-212ENST00000557538 FHAD1B1AJZ9 1412 aa1.62□□□□□ -2.15
HIF1A-212ENST00000557538 C5orf52A6NGY3 159 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 CASTOR2A6NHX0 329 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 ENO4A6NNW6 628 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 SMTNL1A8MU46 457 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 CAPN9O14815 690 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 IFIT3O14879 490 aaKnown RBP1.61□□□□□ -2.15
HIF1A-212ENST00000557538 CASQ2O14958 399 aaPredicted RBP1.61□□□□□ -2.15
HIF1A-212ENST00000557538 WDR46O15213 610 aaKnown RBP1.61□□□□□ -2.15
HIF1A-212ENST00000557538 TTI1O43156 1089 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 SMC2O95347 1197 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 TRUB2O95900 331 aaKnown RBP1.61□□□□□ -2.15
HIF1A-212ENST00000557538 SLC4A1P02730 911 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 TFAP2AP05549 437 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 PFKFB1P16118 471 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 ADRA2CP18825 462 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 CA6P23280 308 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 NMBRP28336 390 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 TIMP3P35625 211 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 PRPHP41219 470 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 GPC3P51654 580 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 TMF1P82094 1093 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 DDR1Q08345 913 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 HSPA14Q0VDF9 509 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 UGCGQ16739 394 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 BMP2KLQ5H9B9 411 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 NDUFAF5Q5TEU4 345 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 NADSYN1Q6IA69 706 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 SPATA21Q7Z572 469 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 LRRC43Q8N309 656 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 AFAP1Q8N556 730 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 ARL10Q8N8L6 244 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 ZNF441Q8N8Z8 693 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 OR6C4Q8NGE1 309 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 TBC1D16Q8TBP0 767 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 ACMSDQ8TDX5 336 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 AFAP1L1Q8TED9 768 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 MTBPQ96DY7 904 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 CFAP36Q96G28 342 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 SEPHS2Q99611 448 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 SH3GL3Q99963 347 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 OSBPL10Q9BXB5 764 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 DNAJC18Q9H819 358 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 CHMP1AQ9HD42 196 aaPredicted RBP1.61□□□□□ -2.15
HIF1A-212ENST00000557538 RNF7Q9UBF6 113 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 RSPH14Q9UHP6 348 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 WDR37Q9Y2I8 494 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 KLHL20Q9Y2M5 609 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 ABCC9O60706 1549 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 FLT1P17948 1338 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 INSRP06213 1382 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 LOC105371267A0A1B0GV96 52 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 ANKUB1A6NFN9 424 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 EIF3DO15371 548 aaKnown RBP eCLIP1.61□□□□□ -2.15
HIF1A-212ENST00000557538 BAG2O95816 211 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 AFPP02771 609 aaKnown RBP1.61□□□□□ -2.15
HIF1A-212ENST00000557538 VTNP04004 478 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 F7P08709 466 aaPredicted RBP1.61□□□□□ -2.15
HIF1A-212ENST00000557538 SNHG28P0DPA3 235 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 IDO1P14902 403 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 DESP17661 470 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 ACHEP22303 614 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 HPDP32754 393 aaPredicted RBP1.61□□□□□ -2.15
HIF1A-212ENST00000557538 TMPRSS3P57727 454 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 SNRPEP62304 92 aaKnown RBP1.61□□□□□ -2.15
HIF1A-212ENST00000557538 PLIN5Q00G26 463 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 ACY1Q03154 408 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 SGCGQ13326 291 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 TUBB2AQ13885 445 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 TYSND1Q2T9J0 566 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 TEX38Q6PEX7 206 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 DCLRE1AQ6PJP8 1040 aa1.61□□□□□ -2.15
HIF1A-212ENST00000557538 C15orf52Q6ZUT6 534 aaKnown RBP1.61□□□□□ -2.15
HIF1A-212ENST00000557538 IL17RELQ6ZVW7 336 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms