RNA–Protein interactions for RNA: ENST00000557356.5

PSEN1-222, Transcript of presenilin 1, human

TSL 4

Gene PSEN1, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSEN1-222	ENST00000557356	C2orf54	Q08AI8	447 aa		7.59	□□□□□ -1.19
PSEN1-222	ENST00000557356	SP140	Q13342	867 aa		7.59	□□□□□ -1.19
PSEN1-222	ENST00000557356	PDAP1	Q13442	181 aa	Known RBP	7.59	□□□□□ -1.19
PSEN1-222	ENST00000557356	SF1	Q15637	639 aa	Known RBP	7.59	□□□□□ -1.19
PSEN1-222	ENST00000557356	CYP2A13	Q16696	494 aa		7.59	□□□□□ -1.19
PSEN1-222	ENST00000557356	MSS51	Q4VC12	460 aa		7.59	□□□□□ -1.19
PSEN1-222	ENST00000557356	CRTC2	Q53ET0	693 aa	Predicted RBP	7.59	□□□□□ -1.19
PSEN1-222	ENST00000557356	ACSBG2	Q5FVE4	666 aa		7.59	□□□□□ -1.19
PSEN1-222	ENST00000557356	TEDDM1	Q5T9Z0	273 aa		7.59	□□□□□ -1.19
PSEN1-222	ENST00000557356	YOD1	Q5VVQ6	348 aa	Predicted RBP	7.59	□□□□□ -1.19
PSEN1-222	ENST00000557356	FAM45BP	Q6NSW5	357 aa		7.59	□□□□□ -1.19
PSEN1-222	ENST00000557356	TLDC1	Q6P9B6	456 aa		7.59	□□□□□ -1.19
PSEN1-222	ENST00000557356	CNST	Q6PJW8	725 aa		7.59	□□□□□ -1.19
PSEN1-222	ENST00000557356	C3orf62	Q6ZUJ4	267 aa		7.59	□□□□□ -1.19
PSEN1-222	ENST00000557356	TMEM126B	Q8IUX1	230 aa		7.59	□□□□□ -1.19
PSEN1-222	ENST00000557356	VRK3	Q8IV63	474 aa		7.59	□□□□□ -1.19
PSEN1-222	ENST00000557356	MYO1H	Q8N1T3	1032 aa		7.59	□□□□□ -1.19
PSEN1-222	ENST00000557356	AGGF1	Q8N302	714 aa	eCLIP	7.59	□□□□□ -1.19
PSEN1-222	ENST00000557356	MMGT1	Q8N4V1	131 aa		7.59	□□□□□ -1.19
PSEN1-222	ENST00000557356	CEP112	Q8N8E3	955 aa		7.59	□□□□□ -1.19
PSEN1-222	ENST00000557356	FBXO36	Q8NEA4	188 aa		7.59	□□□□□ -1.19
PSEN1-222	ENST00000557356	FAM45A	Q8TCE6	357 aa		7.59	□□□□□ -1.19
PSEN1-222	ENST00000557356	LKAAEAR1	Q8TD35	194 aa		7.59	□□□□□ -1.19
PSEN1-222	ENST00000557356	JPH3	Q8WXH2	748 aa	Predicted RBP	7.59	□□□□□ -1.19
PSEN1-222	ENST00000557356	ANKRD7	Q92527	254 aa		7.59	□□□□□ -1.19
PSEN1-222	ENST00000557356	OR2A14	Q96R47	310 aa		7.59	□□□□□ -1.19
PSEN1-222	ENST00000557356	UBL7	Q96S82	380 aa	Predicted RBP	7.59	□□□□□ -1.19
PSEN1-222	ENST00000557356	GPR21	Q99679	349 aa		7.59	□□□□□ -1.19
PSEN1-222	ENST00000557356	CTRC	Q99895	268 aa		7.59	□□□□□ -1.19
PSEN1-222	ENST00000557356	GPR87	Q9BY21	358 aa		7.59	□□□□□ -1.19
PSEN1-222	ENST00000557356	TWSG1	Q9GZX9	223 aa		7.59	□□□□□ -1.19
PSEN1-222	ENST00000557356	DPH5	Q9H2P9	285 aa		7.59	□□□□□ -1.19
PSEN1-222	ENST00000557356	XKR8	Q9H6D3	395 aa		7.59	□□□□□ -1.19
PSEN1-222	ENST00000557356	GPN2	Q9H9Y4	310 aa	Predicted RBP	7.59	□□□□□ -1.19
PSEN1-222	ENST00000557356	MOCS1	Q9NZB8	636 aa		7.59	□□□□□ -1.19
PSEN1-222	ENST00000557356	MTRF1L	Q9UGC7	380 aa	Known RBP	7.59	□□□□□ -1.19
PSEN1-222	ENST00000557356	SRPK3	Q9UPE1	567 aa		7.59	□□□□□ -1.19
PSEN1-222	ENST00000557356	PLCL2	Q9UPR0	1127 aa		7.59	□□□□□ -1.19
PSEN1-222	ENST00000557356	EIF4E1B	A6NMX2	242 aa	Known RBP	7.58	□□□□□ -1.2
PSEN1-222	ENST00000557356		E7EQ34	232 aa		7.58	□□□□□ -1.2
PSEN1-222	ENST00000557356	MYO1C	O00159	1063 aa		7.58	□□□□□ -1.2
PSEN1-222	ENST00000557356	SRPX2	O60687	465 aa	Predicted RBP	7.58	□□□□□ -1.2
PSEN1-222	ENST00000557356	SCRG1	O75711	98 aa		7.58	□□□□□ -1.2
PSEN1-222	ENST00000557356	KRT37	O76014	449 aa		7.58	□□□□□ -1.2
PSEN1-222	ENST00000557356	KIAA0754	O94854	1291 aa		7.58	□□□□□ -1.2
PSEN1-222	ENST00000557356	DLGAP3	O95886	979 aa		7.58	□□□□□ -1.2
PSEN1-222	ENST00000557356	ITGB2	P05107	769 aa		7.58	□□□□□ -1.2
PSEN1-222	ENST00000557356	EBLN1	P0CF75	366 aa		7.58	□□□□□ -1.2
PSEN1-222	ENST00000557356	PIM1	P11309	404 aa	Predicted RBP	7.58	□□□□□ -1.2
PSEN1-222	ENST00000557356	CCND1	P24385	295 aa		7.58	□□□□□ -1.2
PSEN1-222	ENST00000557356	STX2	P32856	288 aa		7.58	□□□□□ -1.2
PSEN1-222	ENST00000557356	PHB	P35232	272 aa		7.58	□□□□□ -1.2
PSEN1-222	ENST00000557356	RPA3	P35244	121 aa	Predicted RBP	7.58	□□□□□ -1.2
PSEN1-222	ENST00000557356	ARSF	P54793	590 aa		7.58	□□□□□ -1.2
PSEN1-222	ENST00000557356	ITGA1	P56199	1179 aa		7.58	□□□□□ -1.2
PSEN1-222	ENST00000557356	RPS15	P62841	145 aa	Known RBP	7.58	□□□□□ -1.2
PSEN1-222	ENST00000557356	SH3BP2	P78314	561 aa		7.58	□□□□□ -1.2
PSEN1-222	ENST00000557356	ABAT	P80404	500 aa		7.58	□□□□□ -1.2
PSEN1-222	ENST00000557356	RELA	Q04206	551 aa		7.58	□□□□□ -1.2
PSEN1-222	ENST00000557356	NAB1	Q13506	487 aa		7.58	□□□□□ -1.2
PSEN1-222	ENST00000557356	FAM214A	Q32MH5	1076 aa		7.58	□□□□□ -1.2
PSEN1-222	ENST00000557356	ZNF789	Q5FWF6	425 aa		7.58	□□□□□ -1.2
PSEN1-222	ENST00000557356	TCTE1	Q5JU00	501 aa		7.58	□□□□□ -1.2
PSEN1-222	ENST00000557356	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	7.58	□□□□□ -1.2
PSEN1-222	ENST00000557356	ARHGAP40	Q5TG30	622 aa		7.58	□□□□□ -1.2
PSEN1-222	ENST00000557356	ZNF549	Q6P9A3	640 aa		7.58	□□□□□ -1.2
PSEN1-222	ENST00000557356	CYHR1	Q6ZMK1	362 aa		7.58	□□□□□ -1.2
PSEN1-222	ENST00000557356	CCDC91	Q7Z6B0	441 aa		7.58	□□□□□ -1.2
PSEN1-222	ENST00000557356	ANKMY2	Q8IV38	441 aa		7.58	□□□□□ -1.2
PSEN1-222	ENST00000557356	IGDCC3	Q8IVU1	814 aa		7.58	□□□□□ -1.2
PSEN1-222	ENST00000557356	NKAP	Q8N5F7	415 aa	Known RBP	7.58	□□□□□ -1.2
PSEN1-222	ENST00000557356	C19orf47	Q8N9M1	422 aa	Known RBP	7.58	□□□□□ -1.2
PSEN1-222	ENST00000557356	LMNTD1	Q8N9Z9	388 aa		7.58	□□□□□ -1.2
PSEN1-222	ENST00000557356	CD200R1	Q8TD46	325 aa		7.58	□□□□□ -1.2
PSEN1-222	ENST00000557356	ATL1	Q8WXF7	558 aa		7.58	□□□□□ -1.2
PSEN1-222	ENST00000557356	DLG3	Q92796	817 aa		7.58	□□□□□ -1.2
PSEN1-222	ENST00000557356	ZNF501	Q96CX3	271 aa	Predicted RBP	7.58	□□□□□ -1.2
PSEN1-222	ENST00000557356	TSPAN17	Q96FV3	270 aa		7.58	□□□□□ -1.2
PSEN1-222	ENST00000557356	PDLIM5	Q96HC4	596 aa	Known RBP	7.58	□□□□□ -1.2
PSEN1-222	ENST00000557356	SLC45A3	Q96JT2	553 aa		7.58	□□□□□ -1.2
PSEN1-222	ENST00000557356	CCDC138	Q96M89	665 aa		7.58	□□□□□ -1.2
PSEN1-222	ENST00000557356	CPNE1	Q99829	537 aa		7.58	□□□□□ -1.2
PSEN1-222	ENST00000557356	TRIM56	Q9BRZ2	755 aa	Known RBP	7.58	□□□□□ -1.2
PSEN1-222	ENST00000557356	SLC12A9	Q9BXP2	914 aa		7.58	□□□□□ -1.2
PSEN1-222	ENST00000557356	PCBD2	Q9H0N5	130 aa		7.58	□□□□□ -1.2
PSEN1-222	ENST00000557356	PARVB	Q9HBI1	364 aa		7.58	□□□□□ -1.2
PSEN1-222	ENST00000557356	POPDC3	Q9HBV1	291 aa		7.58	□□□□□ -1.2
PSEN1-222	ENST00000557356	APMAP	Q9HDC9	416 aa		7.58	□□□□□ -1.2
PSEN1-222	ENST00000557356	SAYSD1	Q9NPB0	183 aa		7.58	□□□□□ -1.2
PSEN1-222	ENST00000557356	GRHL1	Q9NZI5	618 aa		7.58	□□□□□ -1.2
PSEN1-222	ENST00000557356	IL1RAPL1	Q9NZN1	696 aa		7.58	□□□□□ -1.2
PSEN1-222	ENST00000557356	ANKMY1	Q9P2S6	941 aa		7.58	□□□□□ -1.2
PSEN1-222	ENST00000557356	SNX7	Q9UNH6	387 aa		7.58	□□□□□ -1.2
PSEN1-222	ENST00000557356	LAMA1	P25391	3075 aa		7.58	□□□□□ -1.2
PSEN1-222	ENST00000557356	TMEM150C	B9EJG8	249 aa		7.57	□□□□□ -1.2
PSEN1-222	ENST00000557356	ERVH48-1	M5A8F1	160 aa		7.57	□□□□□ -1.2
PSEN1-222	ENST00000557356	TXNDC9	O14530	226 aa		7.57	□□□□□ -1.2
PSEN1-222	ENST00000557356	TP73	O15350	636 aa		7.57	□□□□□ -1.2
PSEN1-222	ENST00000557356	EFS	O43281	561 aa		7.57	□□□□□ -1.2
PSEN1-222	ENST00000557356	OR2B3	O76000	313 aa		7.57	□□□□□ -1.2

Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms