RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 SRD5A1P18405 259 aa3.79□□□□□ -1.8
CHD8-212ENST00000557329 GABRR2P28476 465 aa3.79□□□□□ -1.8
CHD8-212ENST00000557329 HOXA11P31270 313 aaPredicted RBP3.79□□□□□ -1.8
CHD8-212ENST00000557329 GNAQP50148 359 aa3.79□□□□□ -1.8
CHD8-212ENST00000557329 CLDN6P56747 220 aa3.79□□□□□ -1.8
CHD8-212ENST00000557329 ROR1Q01973 937 aa3.79□□□□□ -1.8
CHD8-212ENST00000557329 POU5F1BQ06416 359 aa3.79□□□□□ -1.8
CHD8-212ENST00000557329 LAMTOR4Q0VGL1 99 aa3.79□□□□□ -1.8
CHD8-212ENST00000557329 CAPSQ13938 189 aa3.79□□□□□ -1.8
CHD8-212ENST00000557329 VEPH1Q14D04 833 aa3.79□□□□□ -1.8
CHD8-212ENST00000557329 GPR68Q15743 365 aa3.79□□□□□ -1.8
CHD8-212ENST00000557329 BAK1Q16611 211 aa3.79□□□□□ -1.8
CHD8-212ENST00000557329 UGCGQ16739 394 aa3.79□□□□□ -1.8
CHD8-212ENST00000557329 XKR3Q5GH77 459 aa3.79□□□□□ -1.8
CHD8-212ENST00000557329 GLRA4Q5JXX5 417 aa3.79□□□□□ -1.8
CHD8-212ENST00000557329 WBP2NLQ6ICG8 309 aa3.79□□□□□ -1.8
CHD8-212ENST00000557329 SHFQ7M4L6 423 aa3.79□□□□□ -1.8
CHD8-212ENST00000557329 RNF168Q8IYW5 571 aaPredicted RBP3.79□□□□□ -1.8
CHD8-212ENST00000557329 SRBD1Q8N5C6 995 aaKnown RBP3.79□□□□□ -1.8
CHD8-212ENST00000557329 ZNF461Q8TAF7 563 aa3.79□□□□□ -1.8
CHD8-212ENST00000557329 CD101Q93033 1021 aa3.79□□□□□ -1.8
CHD8-212ENST00000557329 FBXL8Q96CD0 374 aa3.79□□□□□ -1.8
CHD8-212ENST00000557329 CCDC43Q96MW1 224 aaKnown RBP3.79□□□□□ -1.8
CHD8-212ENST00000557329 JPH2Q9BR39 696 aaPredicted RBP3.79□□□□□ -1.8
CHD8-212ENST00000557329 LZTS2Q9BRK4 669 aa3.79□□□□□ -1.8
CHD8-212ENST00000557329 FUZQ9BT04 418 aa3.79□□□□□ -1.8
CHD8-212ENST00000557329 TEKT3Q9BXF9 490 aa3.79□□□□□ -1.8
CHD8-212ENST00000557329 MINDY3Q9H8M7 445 aa3.79□□□□□ -1.8
CHD8-212ENST00000557329 ZDHHC4Q9NPG8 344 aa3.79□□□□□ -1.8
CHD8-212ENST00000557329 TLR8Q9NR97 1041 aaKnown RBP3.79□□□□□ -1.8
CHD8-212ENST00000557329 MPP6Q9NZW5 540 aa3.79□□□□□ -1.8
CHD8-212ENST00000557329 ZNF462Q96JM2 2506 aa3.79□□□□□ -1.8
CHD8-212ENST00000557329 PIEZO2Q9H5I5 2752 aa3.79□□□□□ -1.8
CHD8-212ENST00000557329 NOTCH4Q99466 2003 aa3.78□□□□□ -1.8
CHD8-212ENST00000557329 ACACAQ13085 2346 aa3.78□□□□□ -1.8
CHD8-212ENST00000557329 CACNA1EQ15878 2313 aa3.78□□□□□ -1.8
CHD8-212ENST00000557329 USP9XQ93008 2570 aaPredicted RBP3.78□□□□□ -1.8
CHD8-212ENST00000557329 GOLGA4Q13439 2230 aaKnown RBP3.78□□□□□ -1.8
CHD8-212ENST00000557329 GON4LQ3T8J9 2241 aa3.78□□□□□ -1.8
CHD8-212ENST00000557329 TDRD15B5MCY1 1934 aaKnown RBP3.78□□□□□ -1.8
CHD8-212ENST00000557329 ITPR1Q14643 2758 aa3.78□□□□□ -1.8
CHD8-212ENST00000557329 TCRBV21S2A2A0A5A6 115 aa3.78□□□□□ -1.8
CHD8-212ENST00000557329 MAGEA13PA6NCF6 341 aa3.78□□□□□ -1.8
CHD8-212ENST00000557329 GOLGA6L9A6NEM1 432 aa3.78□□□□□ -1.8
CHD8-212ENST00000557329 HOXC11O43248 304 aaPredicted RBP3.78□□□□□ -1.8
CHD8-212ENST00000557329 TSPAN1O60635 241 aa3.78□□□□□ -1.8
CHD8-212ENST00000557329 LDB3O75112 727 aa3.78□□□□□ -1.8
CHD8-212ENST00000557329 ATP2C2O75185 946 aa3.78□□□□□ -1.8
CHD8-212ENST00000557329 KLF8O95600 359 aaPredicted RBP3.78□□□□□ -1.8
CHD8-212ENST00000557329 GP1BBP13224 206 aa3.78□□□□□ -1.8
CHD8-212ENST00000557329 COX7A2P14406 83 aa3.78□□□□□ -1.8
CHD8-212ENST00000557329 RRM1P23921 792 aa3.78□□□□□ -1.8
CHD8-212ENST00000557329 AXLP30530 894 aa3.78□□□□□ -1.8
CHD8-212ENST00000557329 IFNAR2P48551 515 aa3.78□□□□□ -1.8
CHD8-212ENST00000557329 OSTNP61366 133 aa3.78□□□□□ -1.8
CHD8-212ENST00000557329 EFNB1P98172 346 aa3.78□□□□□ -1.8
CHD8-212ENST00000557329 ZNF33AQ06730 810 aa3.78□□□□□ -1.8
CHD8-212ENST00000557329 TFDP1Q14186 410 aa3.78□□□□□ -1.8
CHD8-212ENST00000557329 FBXO43Q4G163 708 aa3.78□□□□□ -1.8
CHD8-212ENST00000557329 HIST2H2BCQ6DN03 193 aa3.78□□□□□ -1.8
CHD8-212ENST00000557329 C16orf82Q7Z2V1 217 aa3.78□□□□□ -1.8
CHD8-212ENST00000557329 RABEPKQ7Z6M1 372 aa3.78□□□□□ -1.8
CHD8-212ENST00000557329 MAB21L3Q8N8X9 362 aa3.78□□□□□ -1.8
CHD8-212ENST00000557329 TRIML1Q8N9V2 468 aa3.78□□□□□ -1.8
CHD8-212ENST00000557329 GJC3Q8NFK1 279 aa3.78□□□□□ -1.8
CHD8-212ENST00000557329 SPATA3Q8NHX4 192 aa3.78□□□□□ -1.8
CHD8-212ENST00000557329 NCOA7Q8NI08 942 aa3.78□□□□□ -1.8
CHD8-212ENST00000557329 MAELQ96JY0 434 aaKnown RBP3.78□□□□□ -1.8
CHD8-212ENST00000557329 LRRC3BQ96PB8 259 aa3.78□□□□□ -1.8
CHD8-212ENST00000557329 FNBP1Q96RU3 617 aa3.78□□□□□ -1.8
CHD8-212ENST00000557329 SEPT5Q99719 369 aaPredicted RBP3.78□□□□□ -1.8
CHD8-212ENST00000557329 SH3GL2Q99962 352 aa3.78□□□□□ -1.8
CHD8-212ENST00000557329 GPR63Q9BZJ6 419 aa3.78□□□□□ -1.8
CHD8-212ENST00000557329 UNC45AQ9H3U1 944 aa3.78□□□□□ -1.8
CHD8-212ENST00000557329 GAREM1Q9H706 876 aa3.78□□□□□ -1.8
CHD8-212ENST00000557329 DDX31Q9H8H2 851 aaKnown RBP3.78□□□□□ -1.8
CHD8-212ENST00000557329 TRPC7Q9HCX4 862 aa3.78□□□□□ -1.8
CHD8-212ENST00000557329 CYSLTR2Q9NS75 346 aa3.78□□□□□ -1.8
CHD8-212ENST00000557329 SMARCAL1Q9NZC9 954 aa3.78□□□□□ -1.8
CHD8-212ENST00000557329 ANKMY1Q9P2S6 941 aa3.78□□□□□ -1.8
CHD8-212ENST00000557329 MTRRQ9UBK8 725 aa3.78□□□□□ -1.8
CHD8-212ENST00000557329 PEMTQ9UBM1 199 aa3.78□□□□□ -1.8
CHD8-212ENST00000557329 PILRBQ9UKJ0 227 aa3.78□□□□□ -1.8
CHD8-212ENST00000557329 NFE2L3Q9Y4A8 694 aa3.78□□□□□ -1.8
CHD8-212ENST00000557329 PLXNB3Q9ULL4 1909 aa3.78□□□□□ -1.81
CHD8-212ENST00000557329 KIF26AQ9ULI4 1882 aaPredicted RBP3.77□□□□□ -1.81
CHD8-212ENST00000557329 EML5Q05BV3 1969 aa3.77□□□□□ -1.81
CHD8-212ENST00000557329 PLSCR5A0PG75 271 aa3.77□□□□□ -1.81
CHD8-212ENST00000557329 ARHGEF37A1IGU5 675 aa3.77□□□□□ -1.81
CHD8-212ENST00000557329 PABPN1LA6NDY0 278 aaKnown RBP3.77□□□□□ -1.81
CHD8-212ENST00000557329 LRRIQ4A6NIV6 560 aa3.77□□□□□ -1.81
CHD8-212ENST00000557329 MEI4A8MW99 385 aa3.77□□□□□ -1.81
CHD8-212ENST00000557329 AKR1B15C9JRZ8 316 aaPredicted RBP3.77□□□□□ -1.81
CHD8-212ENST00000557329 TRDMT1O14717 391 aaKnown RBP3.77□□□□□ -1.81
CHD8-212ENST00000557329 B4GALT5O43286 388 aa3.77□□□□□ -1.81
CHD8-212ENST00000557329 PRAMEF12O95522 483 aa3.77□□□□□ -1.81
CHD8-212ENST00000557329 MT-CYBP00156 380 aaPredicted RBP3.77□□□□□ -1.81
CHD8-212ENST00000557329 HEXAP06865 529 aa3.77□□□□□ -1.81
CHD8-212ENST00000557329 MMP2P08253 660 aa3.77□□□□□ -1.81
CHD8-212ENST00000557329 SNRNP70P08621 437 aaKnown RBP3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms