RNA–Protein interactions for RNA: ENST00000557280.5

SEC23A-213, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 4 BASIC

Gene SEC23A, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-213ENST00000557280 GATA6Q92908 595 aa20.23■□□□□ 0.83
SEC23A-213ENST00000557280 CAVIN3Q969G5 261 aa20.23■□□□□ 0.83
SEC23A-213ENST00000557280 KLHL25Q9H0H3 589 aa20.23■□□□□ 0.83
SEC23A-213ENST00000557280 ZNF768Q9H5H4 540 aaKnown RBP20.23■□□□□ 0.83
SEC23A-213ENST00000557280 SYTL2Q9HCH5 934 aa20.23■□□□□ 0.83
SEC23A-213ENST00000557280 OCIAD1Q9NX40 245 aa20.23■□□□□ 0.83
SEC23A-213ENST00000557280 CTNNAL1Q9UBT7 734 aa20.23■□□□□ 0.83
SEC23A-213ENST00000557280 ZNF180Q9UJW8 692 aa20.23■□□□□ 0.83
SEC23A-213ENST00000557280 TMX2-CTNND1H3BSU7 103 aa20.22■□□□□ 0.83
SEC23A-213ENST00000557280 HGSO14964 777 aaPredicted RBP20.22■□□□□ 0.83
SEC23A-213ENST00000557280 KDM1AO60341 852 aa20.22■□□□□ 0.83
SEC23A-213ENST00000557280 PRAMEF10O60809 474 aa20.22■□□□□ 0.83
SEC23A-213ENST00000557280 CYP2A7P20853 494 aa20.22■□□□□ 0.83
SEC23A-213ENST00000557280 MAP4P27816 1152 aaKnown RBP20.22■□□□□ 0.83
SEC23A-213ENST00000557280 IMPA1P29218 277 aa20.22■□□□□ 0.83
SEC23A-213ENST00000557280 SERPINB8P50452 374 aa20.22■□□□□ 0.83
SEC23A-213ENST00000557280 CSHL1Q14406 222 aa20.22■□□□□ 0.83
SEC23A-213ENST00000557280 TSNQ15631 228 aaKnown RBP20.22■□□□□ 0.83
SEC23A-213ENST00000557280 ANKS6Q68DC2 871 aa20.22■□□□□ 0.83
SEC23A-213ENST00000557280 EMBQ6PCB8 327 aa20.22■□□□□ 0.83
SEC23A-213ENST00000557280 SPESP1Q6UW49 350 aa20.22■□□□□ 0.83
SEC23A-213ENST00000557280 RAPH1Q70E73 1250 aa20.22■□□□□ 0.83
SEC23A-213ENST00000557280 PMEPA1Q969W9 287 aa20.22■□□□□ 0.83
SEC23A-213ENST00000557280 PTERQ96BW5 349 aa20.22■□□□□ 0.83
SEC23A-213ENST00000557280 GRAMD1AQ96CP6 724 aa20.22■□□□□ 0.83
SEC23A-213ENST00000557280 UBXN10Q96LJ8 280 aa20.22■□□□□ 0.83
SEC23A-213ENST00000557280 RAB11FIP5Q9BXF6 653 aa20.22■□□□□ 0.83
SEC23A-213ENST00000557280 PITPNM3Q9BZ71 974 aa20.22■□□□□ 0.83
SEC23A-213ENST00000557280 DERL2Q9GZP9 239 aa20.22■□□□□ 0.83
SEC23A-213ENST00000557280 PARVBQ9HBI1 364 aa20.22■□□□□ 0.83
SEC23A-213ENST00000557280 IGSF5Q9NSI5 407 aa20.22■□□□□ 0.83
SEC23A-213ENST00000557280 SEMA5BQ9P283 1151 aa20.22■□□□□ 0.83
SEC23A-213ENST00000557280 IKBKGQ9Y6K9 419 aa20.22■□□□□ 0.83
SEC23A-213ENST00000557280 WDFY3Q8IZQ1 3526 aa20.22■□□□□ 0.83
SEC23A-213ENST00000557280 EFCAB7A8K855 629 aa20.21■□□□□ 0.83
SEC23A-213ENST00000557280 ISM1B1AKI9 464 aa20.21■□□□□ 0.83
SEC23A-213ENST00000557280 TRIM49D1C9J1S8 452 aa20.21■□□□□ 0.83
SEC23A-213ENST00000557280 PLD2O14939 933 aa20.21■□□□□ 0.83
SEC23A-213ENST00000557280 SLC16A5O15375 505 aa20.21■□□□□ 0.83
SEC23A-213ENST00000557280 PRICKLE3O43900 615 aaPredicted RBP20.21■□□□□ 0.83
SEC23A-213ENST00000557280 C2P06681 752 aa20.21■□□□□ 0.83
SEC23A-213ENST00000557280 CD1DP15813 335 aa20.21■□□□□ 0.83
SEC23A-213ENST00000557280 ST6GAL1P15907 406 aa20.21■□□□□ 0.83
SEC23A-213ENST00000557280 CRABP2P29373 138 aa20.21■□□□□ 0.83
SEC23A-213ENST00000557280 MAGEA12P43365 314 aa20.21■□□□□ 0.83
SEC23A-213ENST00000557280 SERPINB9P50453 376 aa20.21■□□□□ 0.83
SEC23A-213ENST00000557280 SH3BP2P78314 561 aa20.21■□□□□ 0.83
SEC23A-213ENST00000557280 KCNAB1Q14722 419 aa20.21■□□□□ 0.83
SEC23A-213ENST00000557280 ZXDCQ2QGD7 858 aaPredicted RBP20.21■□□□□ 0.83
SEC23A-213ENST00000557280 ADGRD1Q6QNK2 874 aa20.21■□□□□ 0.83
SEC23A-213ENST00000557280 SUSD1Q6UWL2 747 aa20.21■□□□□ 0.83
SEC23A-213ENST00000557280 LRRC56Q8IYG6 542 aaPredicted RBP20.21■□□□□ 0.83
SEC23A-213ENST00000557280 CENPLQ8N0S6 344 aaPredicted RBP20.21■□□□□ 0.83
SEC23A-213ENST00000557280 FBXO39Q8N4B4 442 aa20.21■□□□□ 0.83
SEC23A-213ENST00000557280 BMPERQ8N8U9 685 aa20.21■□□□□ 0.83
SEC23A-213ENST00000557280 WDR36Q8NI36 951 aaKnown RBP20.21■□□□□ 0.83
SEC23A-213ENST00000557280 HMGCLL1Q8TB92 370 aa20.21■□□□□ 0.83
SEC23A-213ENST00000557280 KLHL6Q8WZ60 621 aa20.21■□□□□ 0.83
SEC23A-213ENST00000557280 ISL2Q96A47 359 aa20.21■□□□□ 0.83
SEC23A-213ENST00000557280 CD180Q99467 661 aa20.21■□□□□ 0.83
SEC23A-213ENST00000557280 CMKLR1Q99788 373 aa20.21■□□□□ 0.83
SEC23A-213ENST00000557280 POLR1BQ9H9Y6 1135 aa20.21■□□□□ 0.83
SEC23A-213ENST00000557280 SIDT1Q9NXL6 827 aaKnown RBP20.21■□□□□ 0.83
SEC23A-213ENST00000557280 UTP6Q9NYH9 597 aaKnown RBP20.21■□□□□ 0.83
SEC23A-213ENST00000557280 STOX2Q9P2F5 926 aaPredicted RBP20.21■□□□□ 0.83
SEC23A-213ENST00000557280 PISDQ9UG56 409 aa20.21■□□□□ 0.83
SEC23A-213ENST00000557280 KLHL20Q9Y2M5 609 aa20.21■□□□□ 0.83
SEC23A-213ENST00000557280 SLC9B1P1A6NJY1 282 aa20.2■□□□□ 0.82
SEC23A-213ENST00000557280 MATN2O00339 956 aa20.2■□□□□ 0.82
SEC23A-213ENST00000557280 TOX3O15405 576 aaPredicted RBP20.2■□□□□ 0.82
SEC23A-213ENST00000557280 FGF3P11487 239 aaPredicted RBP20.2■□□□□ 0.82
SEC23A-213ENST00000557280 CDH3P22223 829 aa20.2■□□□□ 0.82
SEC23A-213ENST00000557280 CSTF2P33240 577 aaKnown RBP eCLIP20.2■□□□□ 0.82
SEC23A-213ENST00000557280 PNLIPRP1P54315 467 aa20.2■□□□□ 0.82
SEC23A-213ENST00000557280 YBX1P67809 324 aaKnown RBP20.2■□□□□ 0.82
SEC23A-213ENST00000557280 KIR2DS3Q14952 304 aa20.2■□□□□ 0.82
SEC23A-213ENST00000557280 OR4D1Q15615 310 aa20.2■□□□□ 0.82
SEC23A-213ENST00000557280 FAM129CQ86XR2 697 aa20.2■□□□□ 0.82
SEC23A-213ENST00000557280 AGBL5Q8NDL9 886 aa20.2■□□□□ 0.82
SEC23A-213ENST00000557280 OR2W6PQ8NHA6 318 aa20.2■□□□□ 0.82
SEC23A-213ENST00000557280 MCOLN3Q8TDD5 553 aa20.2■□□□□ 0.82
SEC23A-213ENST00000557280 KCTD4Q8WVF5 259 aa20.2■□□□□ 0.82
SEC23A-213ENST00000557280 SLC41A2Q96JW4 573 aa20.2■□□□□ 0.82
SEC23A-213ENST00000557280 NRSN2Q9GZP1 204 aa20.2■□□□□ 0.82
SEC23A-213ENST00000557280 KNTC1P50748 2209 aa20.2■□□□□ 0.82
SEC23A-213ENST00000557280 ASPMQ8IZT6 3477 aa20.2■□□□□ 0.82
SEC23A-213ENST00000557280 A0A096LPK6 155 aa20.19■□□□□ 0.82
SEC23A-213ENST00000557280 C1QTNF9BB2RNN3 333 aa20.19■□□□□ 0.82
SEC23A-213ENST00000557280 E7ENX8 843 aa20.19■□□□□ 0.82
SEC23A-213ENST00000557280 BRINP1O60477 761 aa20.19■□□□□ 0.82
SEC23A-213ENST00000557280 C1QTNF9P0C862 333 aa20.19■□□□□ 0.82
SEC23A-213ENST00000557280 TYK2P29597 1187 aa20.19■□□□□ 0.82
SEC23A-213ENST00000557280 SLCO1A2P46721 670 aa20.19■□□□□ 0.82
SEC23A-213ENST00000557280 TAP2Q03519 686 aa20.19■□□□□ 0.82
SEC23A-213ENST00000557280 EIF3IQ13347 325 aaKnown RBP20.19■□□□□ 0.82
SEC23A-213ENST00000557280 TSTA3Q13630 321 aaPredicted RBP20.19■□□□□ 0.82
SEC23A-213ENST00000557280 RTP5Q14D33 572 aa20.19■□□□□ 0.82
SEC23A-213ENST00000557280 ZIC1Q15915 447 aa20.19■□□□□ 0.82
SEC23A-213ENST00000557280 TAOK1Q7L7X3 1001 aa20.19■□□□□ 0.82
SEC23A-213ENST00000557280 SYTL1Q8IYJ3 562 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms