RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 OR2A14Q96R47 310 aa11.93□□□□□ -0.5
PSEN1-220ENST00000557037 TRIM7Q9C029 511 aa11.93□□□□□ -0.5
PSEN1-220ENST00000557037 NDST4Q9H3R1 872 aa11.93□□□□□ -0.5
PSEN1-220ENST00000557037 TFB2MQ9H5Q4 396 aaKnown RBP11.93□□□□□ -0.5
PSEN1-220ENST00000557037 MAGEE1Q9HCI5 957 aa11.93□□□□□ -0.5
PSEN1-220ENST00000557037 IL26Q9NPH9 171 aa11.93□□□□□ -0.5
PSEN1-220ENST00000557037 CUTCQ9NTM9 273 aa11.93□□□□□ -0.5
PSEN1-220ENST00000557037 ANKRD10Q9NXR5 420 aa11.93□□□□□ -0.5
PSEN1-220ENST00000557037 SPHK1Q9NYA1 384 aa11.93□□□□□ -0.5
PSEN1-220ENST00000557037 KLHL20Q9Y2M5 609 aa11.93□□□□□ -0.5
PSEN1-220ENST00000557037 SPO11Q9Y5K1 396 aa11.93□□□□□ -0.5
PSEN1-220ENST00000557037 MPDZO75970 2070 aa11.93□□□□□ -0.5
PSEN1-220ENST00000557037 ASPDHA6ND91 283 aa11.92□□□□□ -0.5
PSEN1-220ENST00000557037 PES1O00541 588 aaKnown RBP11.92□□□□□ -0.5
PSEN1-220ENST00000557037 MATN3O15232 486 aa11.92□□□□□ -0.5
PSEN1-220ENST00000557037 RNF8O76064 485 aa11.92□□□□□ -0.5
PSEN1-220ENST00000557037 PRKCSHP14314 528 aaPredicted RBP11.92□□□□□ -0.5
PSEN1-220ENST00000557037 EEF1DP29692 281 aaKnown RBP11.92□□□□□ -0.5
PSEN1-220ENST00000557037 SERPINB6P35237 376 aa11.92□□□□□ -0.5
PSEN1-220ENST00000557037 SOX5P35711 763 aa11.92□□□□□ -0.5
PSEN1-220ENST00000557037 PPP2R5EQ16537 467 aa11.92□□□□□ -0.5
PSEN1-220ENST00000557037 LONRF2Q1L5Z9 754 aa11.92□□□□□ -0.5
PSEN1-220ENST00000557037 RNFT1Q5M7Z0 435 aa11.92□□□□□ -0.5
PSEN1-220ENST00000557037 LDLRAP1Q5SW96 308 aa11.92□□□□□ -0.5
PSEN1-220ENST00000557037 FCRLBQ6BAA4 426 aa11.92□□□□□ -0.5
PSEN1-220ENST00000557037 ACAD10Q6JQN1 1059 aa11.92□□□□□ -0.5
PSEN1-220ENST00000557037 SARM1Q6SZW1 724 aa11.92□□□□□ -0.5
PSEN1-220ENST00000557037 ARSKQ6UWY0 536 aa11.92□□□□□ -0.5
PSEN1-220ENST00000557037 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.92□□□□□ -0.5
PSEN1-220ENST00000557037 LAPTM4BQ86VI4 370 aa11.92□□□□□ -0.5
PSEN1-220ENST00000557037 PSTKQ8IV42 348 aaKnown RBP11.92□□□□□ -0.5
PSEN1-220ENST00000557037 MCATQ8IVS2 390 aaKnown RBP11.92□□□□□ -0.5
PSEN1-220ENST00000557037 BEST3Q8N1M1 668 aa11.92□□□□□ -0.5
PSEN1-220ENST00000557037 CPSF7Q8N684 471 aaKnown RBP11.92□□□□□ -0.5
PSEN1-220ENST00000557037 ARMC2Q8NEN0 867 aa11.92□□□□□ -0.5
PSEN1-220ENST00000557037 MIEF2Q96C03 454 aa11.92□□□□□ -0.5
PSEN1-220ENST00000557037 SEC16BQ96JE7 1060 aa11.92□□□□□ -0.5
PSEN1-220ENST00000557037 TRIB3Q96RU7 358 aa11.92□□□□□ -0.5
PSEN1-220ENST00000557037 CHRNA10Q9GZZ6 450 aa11.92□□□□□ -0.5
PSEN1-220ENST00000557037 TAS2R14Q9NYV8 317 aa11.92□□□□□ -0.5
PSEN1-220ENST00000557037 IGHV1-45A0A0A0MS14 117 aa11.91□□□□□ -0.5
PSEN1-220ENST00000557037 A0A0J9YY10 115 aa11.91□□□□□ -0.5
PSEN1-220ENST00000557037 MFSD11O43934 449 aa11.91□□□□□ -0.5
PSEN1-220ENST00000557037 ZGLP1P0C6A0 271 aa11.91□□□□□ -0.5
PSEN1-220ENST00000557037 TCF4P15884 667 aa11.91□□□□□ -0.5
PSEN1-220ENST00000557037 MSH3P20585 1137 aa11.91□□□□□ -0.5
PSEN1-220ENST00000557037 CXCR2P25025 360 aa11.91□□□□□ -0.5
PSEN1-220ENST00000557037 IL1R2P27930 398 aa11.91□□□□□ -0.5
PSEN1-220ENST00000557037 PTGS2P35354 604 aa11.91□□□□□ -0.5
PSEN1-220ENST00000557037 OCA2Q04671 838 aa11.91□□□□□ -0.5
PSEN1-220ENST00000557037 PMPCAQ10713 525 aa11.91□□□□□ -0.5
PSEN1-220ENST00000557037 MAMLD1Q13495 774 aa11.91□□□□□ -0.5
PSEN1-220ENST00000557037 PCSK7Q16549 785 aa11.91□□□□□ -0.5
PSEN1-220ENST00000557037 DPYSL2Q16555 572 aa11.91□□□□□ -0.5
PSEN1-220ENST00000557037 ATP13A4Q4VNC1 1196 aa11.91□□□□□ -0.5
PSEN1-220ENST00000557037 RIPOR1Q6ZS17 1223 aa11.91□□□□□ -0.5
PSEN1-220ENST00000557037 VWA5B2Q8N398 1253 aa11.91□□□□□ -0.5
PSEN1-220ENST00000557037 MDS2Q8NDY4 140 aa11.91□□□□□ -0.5
PSEN1-220ENST00000557037 DDHD1Q8NEL9 900 aa11.91□□□□□ -0.5
PSEN1-220ENST00000557037 FAM57AQ8TBR7 257 aa11.91□□□□□ -0.5
PSEN1-220ENST00000557037 DMRT3Q9NQL9 472 aa11.91□□□□□ -0.5
PSEN1-220ENST00000557037 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.91□□□□□ -0.5
PSEN1-220ENST00000557037 HAUS2Q9NVX0 235 aa11.91□□□□□ -0.5
PSEN1-220ENST00000557037 TRPS1Q9UHF7 1281 aa11.91□□□□□ -0.5
PSEN1-220ENST00000557037 RWDD2AQ9UIY3 292 aa11.91□□□□□ -0.5
PSEN1-220ENST00000557037 GNPTGQ9UJJ9 305 aa11.91□□□□□ -0.5
PSEN1-220ENST00000557037 ICKQ9UPZ9 632 aa11.91□□□□□ -0.5
PSEN1-220ENST00000557037 ZDHHC9Q9Y397 364 aa11.91□□□□□ -0.5
PSEN1-220ENST00000557037 CHD3Q12873 2000 aaKnown RBP11.91□□□□□ -0.5
PSEN1-220ENST00000557037 ANK2Q01484 3957 aa11.9□□□□□ -0.5
PSEN1-220ENST00000557037 A0A1B0GTH9 108 aa11.9□□□□□ -0.5
PSEN1-220ENST00000557037 ZNF24P17028 368 aa11.9□□□□□ -0.5
PSEN1-220ENST00000557037 KIR2DL3P43628 341 aa11.9□□□□□ -0.5
PSEN1-220ENST00000557037 EMP2P54851 167 aa11.9□□□□□ -0.5
PSEN1-220ENST00000557037 NUP107P57740 925 aa11.9□□□□□ -0.5
PSEN1-220ENST00000557037 FANCCQ00597 558 aa11.9□□□□□ -0.5
PSEN1-220ENST00000557037 GALNT2Q10471 571 aa11.9□□□□□ -0.5
PSEN1-220ENST00000557037 TUBA3CQ13748 450 aa11.9□□□□□ -0.5
PSEN1-220ENST00000557037 SYCP1Q15431 976 aa11.9□□□□□ -0.5
PSEN1-220ENST00000557037 OR1C1Q15619 314 aa11.9□□□□□ -0.5
PSEN1-220ENST00000557037 HSP90AA4PQ58FG1 418 aa11.9□□□□□ -0.5
PSEN1-220ENST00000557037 SPINK14Q6IE38 97 aa11.9□□□□□ -0.5
PSEN1-220ENST00000557037 TUBA3EQ6PEY2 450 aa11.9□□□□□ -0.5
PSEN1-220ENST00000557037 KDELC1Q6UW63 502 aa11.9□□□□□ -0.5
PSEN1-220ENST00000557037 UNC5AQ6ZN44 842 aa11.9□□□□□ -0.5
PSEN1-220ENST00000557037 C16orf47Q6ZP98 133 aaPredicted RBP11.9□□□□□ -0.5
PSEN1-220ENST00000557037 GALNTL5Q7Z4T8 443 aa11.9□□□□□ -0.5
PSEN1-220ENST00000557037 LRRC49Q8IUZ0 686 aa11.9□□□□□ -0.5
PSEN1-220ENST00000557037 MCOLN2Q8IZK6 566 aa11.9□□□□□ -0.5
PSEN1-220ENST00000557037 SIMC1Q8NDZ2 872 aa11.9□□□□□ -0.5
PSEN1-220ENST00000557037 MYRIPQ8NFW9 859 aa11.9□□□□□ -0.5
PSEN1-220ENST00000557037 FLVCR1-AS1Q8TAF5 88 aa11.9□□□□□ -0.5
PSEN1-220ENST00000557037 TIGD1Q96MW7 591 aa11.9□□□□□ -0.5
PSEN1-220ENST00000557037 CCM2Q9BSQ5 444 aa11.9□□□□□ -0.5
PSEN1-220ENST00000557037 XPO4Q9C0E2 1151 aaKnown RBP11.9□□□□□ -0.5
PSEN1-220ENST00000557037 RIC8BQ9NVN3 520 aa11.9□□□□□ -0.5
PSEN1-220ENST00000557037 CRIM1Q9NZV1 1036 aa11.9□□□□□ -0.5
PSEN1-220ENST00000557037 AMACRQ9UHK6 382 aa11.9□□□□□ -0.5
PSEN1-220ENST00000557037 TEKT2Q9UIF3 430 aa11.9□□□□□ -0.5
PSEN1-220ENST00000557037 ANK3Q12955 4377 aaKnown RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms