RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 ASPMQ8IZT6 3477 aa16.91■□□□□ 0.3
SHMT2-225ENST00000556798 EFCAB7A8K855 629 aa16.91■□□□□ 0.3
SHMT2-225ENST00000556798 C1QTNF9BB2RNN3 333 aa16.91■□□□□ 0.3
SHMT2-225ENST00000556798 CDC7O00311 574 aa16.91■□□□□ 0.3
SHMT2-225ENST00000556798 MATN2O00339 956 aa16.91■□□□□ 0.3
SHMT2-225ENST00000556798 BRINP1O60477 761 aa16.91■□□□□ 0.3
SHMT2-225ENST00000556798 ANKRD34CP0C6C1 535 aa16.91■□□□□ 0.3
SHMT2-225ENST00000556798 C1QTNF9P0C862 333 aa16.91■□□□□ 0.3
SHMT2-225ENST00000556798 PVRP15151 417 aa16.91■□□□□ 0.3
SHMT2-225ENST00000556798 CYP2A7P20853 494 aa16.91■□□□□ 0.3
SHMT2-225ENST00000556798 CDH3P22223 829 aa16.91■□□□□ 0.3
SHMT2-225ENST00000556798 PRDX3P30048 256 aaKnown RBP16.91■□□□□ 0.3
SHMT2-225ENST00000556798 MSH2P43246 934 aa16.91■□□□□ 0.3
SHMT2-225ENST00000556798 MAPK10P53779 464 aa16.91■□□□□ 0.3
SHMT2-225ENST00000556798 FOXK2Q01167 660 aa16.91■□□□□ 0.3
SHMT2-225ENST00000556798 SP140Q13342 867 aa16.91■□□□□ 0.3
SHMT2-225ENST00000556798 ANKS6Q68DC2 871 aa16.91■□□□□ 0.3
SHMT2-225ENST00000556798 SPESP1Q6UW49 350 aa16.91■□□□□ 0.3
SHMT2-225ENST00000556798 RAPH1Q70E73 1250 aa16.91■□□□□ 0.3
SHMT2-225ENST00000556798 FAM20CQ8IXL6 584 aa16.91■□□□□ 0.3
SHMT2-225ENST00000556798 FBXO15Q8NCQ5 510 aaPredicted RBP16.91■□□□□ 0.3
SHMT2-225ENST00000556798 PPFIBP2Q8ND30 876 aa16.91■□□□□ 0.3
SHMT2-225ENST00000556798 FLVCR1-AS1Q8TAF5 88 aa16.91■□□□□ 0.3
SHMT2-225ENST00000556798 MDM1Q8TC05 714 aa16.91■□□□□ 0.3
SHMT2-225ENST00000556798 AENQ8WTP8 325 aaKnown RBP16.91■□□□□ 0.3
SHMT2-225ENST00000556798 DCAKDQ8WVC6 231 aa16.91■□□□□ 0.3
SHMT2-225ENST00000556798 PRR11Q96HE9 360 aaPredicted RBP16.91■□□□□ 0.3
SHMT2-225ENST00000556798 OR2A14Q96R47 310 aa16.91■□□□□ 0.3
SHMT2-225ENST00000556798 CD180Q99467 661 aa16.91■□□□□ 0.3
SHMT2-225ENST00000556798 SLC12A9Q9BXP2 914 aa16.91■□□□□ 0.3
SHMT2-225ENST00000556798 PARD6BQ9BYG5 372 aa16.91■□□□□ 0.3
SHMT2-225ENST00000556798 RRAGDQ9NQL2 400 aaPredicted RBP16.91■□□□□ 0.3
SHMT2-225ENST00000556798 LNPEPQ9UIQ6 1025 aa16.91■□□□□ 0.3
SHMT2-225ENST00000556798 IGF2RP11717 2491 aa16.9■□□□□ 0.3
SHMT2-225ENST00000556798 SLC16A5O15375 505 aa16.9■□□□□ 0.3
SHMT2-225ENST00000556798 TOX3O15405 576 aaPredicted RBP16.9■□□□□ 0.3
SHMT2-225ENST00000556798 TNFSF15O95150 251 aa16.9■□□□□ 0.3
SHMT2-225ENST00000556798 SLC16A8O95907 504 aa16.9■□□□□ 0.3
SHMT2-225ENST00000556798 SLC35E2BP0CK96 405 aa16.9■□□□□ 0.3
SHMT2-225ENST00000556798 CCDC166P0CW27 439 aa16.9■□□□□ 0.3
SHMT2-225ENST00000556798 PSMB5P28074 263 aa16.9■□□□□ 0.3
SHMT2-225ENST00000556798 GCAP28676 217 aa16.9■□□□□ 0.3
SHMT2-225ENST00000556798 SH3BP2P78314 561 aa16.9■□□□□ 0.3
SHMT2-225ENST00000556798 CYP4F3Q08477 520 aa16.9■□□□□ 0.3
SHMT2-225ENST00000556798 TSTA3Q13630 321 aaPredicted RBP16.9■□□□□ 0.3
SHMT2-225ENST00000556798 KCNAB1Q14722 419 aa16.9■□□□□ 0.3
SHMT2-225ENST00000556798 RTP5Q14D33 572 aa16.9■□□□□ 0.3
SHMT2-225ENST00000556798 CYP2A13Q16696 494 aa16.9■□□□□ 0.3
SHMT2-225ENST00000556798 SBSNQ6UWP8 590 aa16.9■□□□□ 0.3
SHMT2-225ENST00000556798 PMEPA1Q969W9 287 aa16.9■□□□□ 0.3
SHMT2-225ENST00000556798 PDLIM5Q96HC4 596 aaKnown RBP16.9■□□□□ 0.3
SHMT2-225ENST00000556798 TWSG1Q9GZX9 223 aa16.9■□□□□ 0.3
SHMT2-225ENST00000556798 PARVBQ9HBI1 364 aa16.9■□□□□ 0.3
SHMT2-225ENST00000556798 SNX15Q9NRS6 342 aa16.9■□□□□ 0.3
SHMT2-225ENST00000556798 UTP6Q9NYH9 597 aaKnown RBP16.9■□□□□ 0.3
SHMT2-225ENST00000556798 SLC9B1P1A6NJY1 282 aa16.89■□□□□ 0.29
SHMT2-225ENST00000556798 PRAMEF10O60809 474 aa16.89■□□□□ 0.29
SHMT2-225ENST00000556798 ALDOAP04075 364 aaKnown RBP16.89■□□□□ 0.29
SHMT2-225ENST00000556798 SHBGP04278 402 aa16.89■□□□□ 0.29
SHMT2-225ENST00000556798 SPTBP11277 2137 aa16.89■□□□□ 0.29
SHMT2-225ENST00000556798 ERGP11308 486 aa16.89■□□□□ 0.29
SHMT2-225ENST00000556798 FGF3P11487 239 aaPredicted RBP16.89■□□□□ 0.29
SHMT2-225ENST00000556798 ST6GAL1P15907 406 aa16.89■□□□□ 0.29
SHMT2-225ENST00000556798 IMPA1P29218 277 aa16.89■□□□□ 0.29
SHMT2-225ENST00000556798 SERPINB9P50453 376 aa16.89■□□□□ 0.29
SHMT2-225ENST00000556798 PNLIPRP1P54315 467 aa16.89■□□□□ 0.29
SHMT2-225ENST00000556798 CSHL1Q14406 222 aa16.89■□□□□ 0.29
SHMT2-225ENST00000556798 KIR2DS3Q14952 304 aa16.89■□□□□ 0.29
SHMT2-225ENST00000556798 TSNQ15631 228 aaKnown RBP16.89■□□□□ 0.29
SHMT2-225ENST00000556798 SUSD1Q6UWL2 747 aa16.89■□□□□ 0.29
SHMT2-225ENST00000556798 UNQ6494/PRO21346Q6UXR6 183 aa16.89■□□□□ 0.29
SHMT2-225ENST00000556798 TAOK1Q7L7X3 1001 aa16.89■□□□□ 0.29
SHMT2-225ENST00000556798 BMPERQ8N8U9 685 aa16.89■□□□□ 0.29
SHMT2-225ENST00000556798 HMGCLL1Q8TB92 370 aa16.89■□□□□ 0.29
SHMT2-225ENST00000556798 MCOLN3Q8TDD5 553 aa16.89■□□□□ 0.29
SHMT2-225ENST00000556798 ZNF480Q8WV37 535 aa16.89■□□□□ 0.29
SHMT2-225ENST00000556798 KLHL6Q8WZ60 621 aa16.89■□□□□ 0.29
SHMT2-225ENST00000556798 DHRS4Q9BTZ2 278 aa16.89■□□□□ 0.29
SHMT2-225ENST00000556798 PITPNM3Q9BZ71 974 aa16.89■□□□□ 0.29
SHMT2-225ENST00000556798 DERL2Q9GZP9 239 aa16.89■□□□□ 0.29
SHMT2-225ENST00000556798 C1GALT1Q9NS00 363 aa16.89■□□□□ 0.29
SHMT2-225ENST00000556798 ABCF3Q9NUQ8 709 aa16.89■□□□□ 0.29
SHMT2-225ENST00000556798 SOHLH2Q9NX45 425 aa16.89■□□□□ 0.29
SHMT2-225ENST00000556798 SIDT1Q9NXL6 827 aaKnown RBP16.89■□□□□ 0.29
SHMT2-225ENST00000556798 SEMA5BQ9P283 1151 aa16.89■□□□□ 0.29
SHMT2-225ENST00000556798 ZNF180Q9UJW8 692 aa16.89■□□□□ 0.29
SHMT2-225ENST00000556798 PCDHGA8Q9Y5G5 932 aa16.89■□□□□ 0.29
SHMT2-225ENST00000556798 SDK2Q58EX2 2172 aa16.89■□□□□ 0.29
SHMT2-225ENST00000556798 A0A0J9YY10 115 aa16.88■□□□□ 0.29
SHMT2-225ENST00000556798 A0A1W2PPV9 198 aa16.88■□□□□ 0.29
SHMT2-225ENST00000556798 GUCA1CO95843 209 aa16.88■□□□□ 0.29
SHMT2-225ENST00000556798 EBLN1P0CF75 366 aa16.88■□□□□ 0.29
SHMT2-225ENST00000556798 CD1DP15813 335 aa16.88■□□□□ 0.29
SHMT2-225ENST00000556798 NELFEP18615 380 aaKnown RBP16.88■□□□□ 0.29
SHMT2-225ENST00000556798 CRABP2P29373 138 aa16.88■□□□□ 0.29
SHMT2-225ENST00000556798 RBMS1P29558 406 aaKnown RBP16.88■□□□□ 0.29
SHMT2-225ENST00000556798 HSD17B3P37058 310 aa16.88■□□□□ 0.29
SHMT2-225ENST00000556798 ARL4DP49703 201 aa16.88■□□□□ 0.29
SHMT2-225ENST00000556798 SERPINB8P50452 374 aa16.88■□□□□ 0.29
SHMT2-225ENST00000556798 IRF9Q00978 393 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms