RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 SIGLEC10Q96LC7 697 aa9.97□□□□□ -0.81
SHMT2-224ENST00000556737 CATSPER2Q96P56 530 aa9.97□□□□□ -0.81
SHMT2-224ENST00000556737 PANX3Q96QZ0 392 aa9.97□□□□□ -0.81
SHMT2-224ENST00000556737 CHRNA10Q9GZZ6 450 aa9.97□□□□□ -0.81
SHMT2-224ENST00000556737 DPH5Q9H2P9 285 aa9.97□□□□□ -0.81
SHMT2-224ENST00000556737 ACTL8Q9H568 366 aa9.97□□□□□ -0.81
SHMT2-224ENST00000556737 FANCEQ9HB96 536 aa9.97□□□□□ -0.81
SHMT2-224ENST00000556737 SYTL2Q9HCH5 934 aa9.97□□□□□ -0.81
SHMT2-224ENST00000556737 PCMTD2Q9NV79 361 aa9.97□□□□□ -0.81
SHMT2-224ENST00000556737 GALPQ9UBC7 116 aa9.97□□□□□ -0.81
SHMT2-224ENST00000556737 PADI1Q9ULC6 663 aa9.97□□□□□ -0.81
SHMT2-224ENST00000556737 MED16Q9Y2X0 877 aa9.97□□□□□ -0.81
SHMT2-224ENST00000556737 B8ZZF3 427 aa9.96□□□□□ -0.82
SHMT2-224ENST00000556737 DNALI1O14645 258 aaPredicted RBP9.96□□□□□ -0.82
SHMT2-224ENST00000556737 RASGRF2O14827 1237 aa9.96□□□□□ -0.82
SHMT2-224ENST00000556737 CREG1O75629 220 aa9.96□□□□□ -0.82
SHMT2-224ENST00000556737 C1orf105O95561 183 aa9.96□□□□□ -0.82
SHMT2-224ENST00000556737 S1PR4O95977 384 aa9.96□□□□□ -0.82
SHMT2-224ENST00000556737 ESR1P03372 595 aa9.96□□□□□ -0.82
SHMT2-224ENST00000556737 RPN2P04844 631 aa9.96□□□□□ -0.82
SHMT2-224ENST00000556737 CAPN1P07384 714 aa9.96□□□□□ -0.82
SHMT2-224ENST00000556737 PAMP19021 973 aa9.96□□□□□ -0.82
SHMT2-224ENST00000556737 TCN2P20062 427 aa9.96□□□□□ -0.82
SHMT2-224ENST00000556737 MCM3P25205 808 aa9.96□□□□□ -0.82
SHMT2-224ENST00000556737 IVDP26440 423 aa9.96□□□□□ -0.82
SHMT2-224ENST00000556737 ATP5DP30049 168 aa9.96□□□□□ -0.82
SHMT2-224ENST00000556737 FMO4P31512 558 aa9.96□□□□□ -0.82
SHMT2-224ENST00000556737 SLC1A2P43004 574 aa9.96□□□□□ -0.82
SHMT2-224ENST00000556737 MC1RQ01726 317 aa9.96□□□□□ -0.82
SHMT2-224ENST00000556737 KCNAB2Q13303 367 aa9.96□□□□□ -0.82
SHMT2-224ENST00000556737 IL10RAQ13651 578 aa9.96□□□□□ -0.82
SHMT2-224ENST00000556737 DEFB110Q30KQ9 67 aa9.96□□□□□ -0.82
SHMT2-224ENST00000556737 ZNF470Q6ECI4 717 aa9.96□□□□□ -0.82
SHMT2-224ENST00000556737 NEPROQ6NW34 567 aa9.96□□□□□ -0.82
SHMT2-224ENST00000556737 C16orf46Q6P387 395 aa9.96□□□□□ -0.82
SHMT2-224ENST00000556737 ZNF549Q6P9A3 640 aa9.96□□□□□ -0.82
SHMT2-224ENST00000556737 DENND6AQ8IWF6 608 aa9.96□□□□□ -0.82
SHMT2-224ENST00000556737 FAM20CQ8IXL6 584 aa9.96□□□□□ -0.82
SHMT2-224ENST00000556737 PPIL6Q8IXY8 311 aa9.96□□□□□ -0.82
SHMT2-224ENST00000556737 IFT20Q8IY31 132 aa9.96□□□□□ -0.82
SHMT2-224ENST00000556737 DSELQ8IZU8 1212 aa9.96□□□□□ -0.82
SHMT2-224ENST00000556737 OR2L8Q8NGY9 312 aa9.96□□□□□ -0.82
SHMT2-224ENST00000556737 CFAP61Q8NHU2 1237 aa9.96□□□□□ -0.82
SHMT2-224ENST00000556737 GIMAP7Q8NHV1 300 aa9.96□□□□□ -0.82
SHMT2-224ENST00000556737 IFT81Q8WYA0 676 aa9.96□□□□□ -0.82
SHMT2-224ENST00000556737 FAM136AQ96C01 138 aa9.96□□□□□ -0.82
SHMT2-224ENST00000556737 TCF12Q99081 682 aa9.96□□□□□ -0.82
SHMT2-224ENST00000556737 SLC30A3Q99726 388 aa9.96□□□□□ -0.82
SHMT2-224ENST00000556737 ARHGAP9Q9BRR9 750 aa9.96□□□□□ -0.82
SHMT2-224ENST00000556737 WDR83Q9BRX9 315 aaKnown RBP9.96□□□□□ -0.82
SHMT2-224ENST00000556737 CHST8Q9H2A9 424 aa9.96□□□□□ -0.82
SHMT2-224ENST00000556737 ADNPQ9H2P0 1102 aa9.96□□□□□ -0.82
SHMT2-224ENST00000556737 PLAC1Q9HBJ0 212 aa9.96□□□□□ -0.82
SHMT2-224ENST00000556737 INTS10Q9NVR2 710 aaKnown RBP9.96□□□□□ -0.82
SHMT2-224ENST00000556737 GEMIN8Q9NWZ8 242 aaKnown RBP9.96□□□□□ -0.82
SHMT2-224ENST00000556737 SAMD15Q9P1V8 674 aa9.96□□□□□ -0.82
SHMT2-224ENST00000556737 PCYOX1Q9UHG3 505 aa9.96□□□□□ -0.82
SHMT2-224ENST00000556737 KCND3Q9UK17 655 aa9.96□□□□□ -0.82
SHMT2-224ENST00000556737 CRYL1Q9Y2S2 319 aa9.96□□□□□ -0.82
SHMT2-224ENST00000556737 SPTBP11277 2137 aa9.95□□□□□ -0.82
SHMT2-224ENST00000556737 ESYT3A0FGR9 886 aa9.95□□□□□ -0.82
SHMT2-224ENST00000556737 SDR42E2A6NKP2 422 aa9.95□□□□□ -0.82
SHMT2-224ENST00000556737 H3BMM5 538 aa9.95□□□□□ -0.82
SHMT2-224ENST00000556737 KPNA5O15131 536 aa9.95□□□□□ -0.82
SHMT2-224ENST00000556737 CTIFO43310 598 aaKnown RBP9.95□□□□□ -0.82
SHMT2-224ENST00000556737 PRICKLE3O43900 615 aaPredicted RBP9.95□□□□□ -0.82
SHMT2-224ENST00000556737 KDM1AO60341 852 aa9.95□□□□□ -0.82
SHMT2-224ENST00000556737 KATNA1O75449 491 aa9.95□□□□□ -0.82
SHMT2-224ENST00000556737 BANF1O75531 89 aa9.95□□□□□ -0.82
SHMT2-224ENST00000556737 USP1O94782 785 aa9.95□□□□□ -0.82
SHMT2-224ENST00000556737 MATN4O95460 622 aa9.95□□□□□ -0.82
SHMT2-224ENST00000556737 RECKO95980 971 aa9.95□□□□□ -0.82
SHMT2-224ENST00000556737 CCNYL3P0C7X3 344 aa9.95□□□□□ -0.82
SHMT2-224ENST00000556737 ERGP11308 486 aa9.95□□□□□ -0.82
SHMT2-224ENST00000556737 PKMP14618 531 aaKnown RBP9.95□□□□□ -0.82
SHMT2-224ENST00000556737 CYP2A7P20853 494 aa9.95□□□□□ -0.82
SHMT2-224ENST00000556737 MAGP20916 626 aa9.95□□□□□ -0.82
SHMT2-224ENST00000556737 CD9P21926 228 aa9.95□□□□□ -0.82
SHMT2-224ENST00000556737 PTPN4P29074 926 aa9.95□□□□□ -0.82
SHMT2-224ENST00000556737 GCGRP47871 477 aa9.95□□□□□ -0.82
SHMT2-224ENST00000556737 CLCN7P51798 805 aa9.95□□□□□ -0.82
SHMT2-224ENST00000556737 ITGA1P56199 1179 aa9.95□□□□□ -0.82
SHMT2-224ENST00000556737 NFKB2Q00653 900 aa9.95□□□□□ -0.82
SHMT2-224ENST00000556737 NFATC3Q12968 1075 aa9.95□□□□□ -0.82
SHMT2-224ENST00000556737 ERV3-1Q14264 604 aa9.95□□□□□ -0.82
SHMT2-224ENST00000556737 UGT8Q16880 541 aa9.95□□□□□ -0.82
SHMT2-224ENST00000556737 DEFB109BQ30KR1 87 aa9.95□□□□□ -0.82
SHMT2-224ENST00000556737 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.95□□□□□ -0.82
SHMT2-224ENST00000556737 IZUMO3Q5VZ72 239 aa9.95□□□□□ -0.82
SHMT2-224ENST00000556737 CNSTQ6PJW8 725 aa9.95□□□□□ -0.82
SHMT2-224ENST00000556737 SYDE1Q6ZW31 735 aaPredicted RBP9.95□□□□□ -0.82
SHMT2-224ENST00000556737 OTOAQ7RTW8 1153 aa9.95□□□□□ -0.82
SHMT2-224ENST00000556737 SDCCAG8Q86SQ7 713 aaPredicted RBP9.95□□□□□ -0.82
SHMT2-224ENST00000556737 TAX1BP1Q86VP1 789 aa9.95□□□□□ -0.82
SHMT2-224ENST00000556737 SYTL1Q8IYJ3 562 aa9.95□□□□□ -0.82
SHMT2-224ENST00000556737 DNAJC22Q8N4W6 341 aa9.95□□□□□ -0.82
SHMT2-224ENST00000556737 C2orf73Q8N5S3 287 aaPredicted RBP9.95□□□□□ -0.82
SHMT2-224ENST00000556737 ZBTB2Q8N680 514 aa9.95□□□□□ -0.82
SHMT2-224ENST00000556737 TCTN2Q96GX1 697 aa9.95□□□□□ -0.82
SHMT2-224ENST00000556737 ANKZF1Q9H8Y5 726 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms