RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 GOLGA8TH3BQL2 631 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 NR5A2O00482 541 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 SDHDO14521 159 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 ZNF195O14628 629 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 HNRNPRO43390 633 aaKnown RBP4.34□□□□□ -1.71
ATXN3-241ENST00000556374 GRID2O43424 1007 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 HCRTO43612 131 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 VPS4BO75351 444 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 GPR32O75388 356 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 PMPCBO75439 489 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 GMNNO75496 209 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 GSRP00390 522 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 PRKCGP05129 697 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 THP07101 528 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 CA3P07451 260 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 SLC35E2BP0CK96 405 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 SMIM18P0DKX4 95 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 SLC2A3P11169 496 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 ZNF23P17027 643 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 TPH1P17752 444 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 KCNA5P22460 613 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 LMO2P25791 158 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 SLC7A1P30825 629 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 CCR1P32246 355 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 TTKP33981 857 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 RANBP1P43487 201 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 AVPR1BP47901 424 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 CXCR3P49682 368 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 GZMKP49863 264 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 RENBPP51606 427 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 TPD52P55327 224 aaPredicted RBP4.34□□□□□ -1.71
ATXN3-241ENST00000556374 NUP107P57740 925 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 KCNK10P57789 538 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 LILRA4P59901 499 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 NAA20P61599 178 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 TUBA4AP68366 448 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 FOXM1Q08050 763 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 ITKQ08881 620 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 NSUN2Q08J23 767 aaKnown RBP eCLIP4.34□□□□□ -1.71
ATXN3-241ENST00000556374 SEMA3BQ13214 749 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 TMED1Q13445 227 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 DCTN2Q13561 401 aaKnown RBP4.34□□□□□ -1.71
ATXN3-241ENST00000556374 CSHL1Q14406 222 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 GRB14Q14449 540 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 ACAP2Q15057 778 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 DLG2Q15700 870 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 NADK2Q4G0N4 442 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 AASDHQ4L235 1098 aaPredicted RBP4.34□□□□□ -1.71
ATXN3-241ENST00000556374 TIGD2Q4W5G0 525 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 C19orf54Q5BKX5 351 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 C6orf52Q5T4I8 152 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 IRAK1BP1Q5VVH5 260 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 WSCD1Q658N2 575 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 MRNIPQ6NTE8 343 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 NEPROQ6NW34 567 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 TTC33Q6PID6 262 aaPredicted RBP4.34□□□□□ -1.71
ATXN3-241ENST00000556374 NAPRTQ6XQN6 538 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 HACD2Q6Y1H2 254 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 BEND5Q7L4P6 421 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 BNIPLQ7Z465 357 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 GPR141Q7Z602 305 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 CUZD1Q86UP6 607 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 DHFR2Q86XF0 187 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 SPATA2LQ8IUW3 424 aaPredicted RBP4.34□□□□□ -1.71
ATXN3-241ENST00000556374 CROCCP3Q8IVE0 287 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 DDIASQ8IXT1 998 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 MIER2Q8N344 545 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 TMEM199Q8N511 208 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.34□□□□□ -1.71
ATXN3-241ENST00000556374 NPWQ8N729 165 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 ZNF610Q8N9Z0 462 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 OR2T34Q8NGX1 318 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 OR2T3Q8NH03 318 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 HM13Q8TCT9 377 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 MAPK15Q8TD08 544 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 DQX1Q8TE96 717 aaKnown RBP4.34□□□□□ -1.71
ATXN3-241ENST00000556374 DNAJB3Q8WWF6 145 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 SLC9A6Q92581 669 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 NDRG1Q92597 394 aaKnown RBP4.34□□□□□ -1.71
ATXN3-241ENST00000556374 ATOH1Q92858 354 aaPredicted RBP4.34□□□□□ -1.71
ATXN3-241ENST00000556374 EXT2Q93063 718 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 NT5C3BQ969T7 300 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 MYLPFQ96A32 169 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 VOPP1Q96AW1 172 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 NXNL1Q96CM4 212 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 C19orf60Q96EN9 201 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 SGF29Q96ES7 293 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 NRBF2Q96F24 287 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 MAELQ96JY0 434 aaKnown RBP4.34□□□□□ -1.71
ATXN3-241ENST00000556374 SENP8Q96LD8 212 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 UROC1Q96N76 676 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 SERPINB11Q96P15 392 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 RANBP9Q96S59 729 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 PKP2Q99959 881 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 HOPXQ9BPY8 73 aaPredicted RBP4.34□□□□□ -1.71
ATXN3-241ENST00000556374 CPPED1Q9BRF8 314 aaPredicted RBP4.34□□□□□ -1.71
ATXN3-241ENST00000556374 TMEM79Q9BSE2 394 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 NDC1Q9BTX1 674 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 C9orf16Q9BUW7 83 aa4.34□□□□□ -1.71
ATXN3-241ENST00000556374 COLEC11Q9BWP8 271 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms