RNA–Protein interactions for RNA: ENST00000556237.1

HIF1A-208, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 4

Gene HIF1A, Length 595 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-208ENST00000556237 IKZF3Q9UKT9 509 aa6.22□□□□□ -1.41
HIF1A-208ENST00000556237 TMEM98Q9Y2Y6 226 aa6.22□□□□□ -1.41
HIF1A-208ENST00000556237 BRWD1Q9NSI6 2320 aa6.22□□□□□ -1.41
HIF1A-208ENST00000556237 COL4A3Q01955 1670 aa6.21□□□□□ -1.42
HIF1A-208ENST00000556237 NPEPPSL1A6NEC2 478 aa6.21□□□□□ -1.42
HIF1A-208ENST00000556237 NEMP2A6NFY4 417 aa6.21□□□□□ -1.42
HIF1A-208ENST00000556237 LRRC72A6NJI9 287 aa6.21□□□□□ -1.42
HIF1A-208ENST00000556237 OR2AG2A6NM03 316 aa6.21□□□□□ -1.42
HIF1A-208ENST00000556237 A8MT66 165 aa6.21□□□□□ -1.42
HIF1A-208ENST00000556237 TMEM114B3SHH9 223 aa6.21□□□□□ -1.42
HIF1A-208ENST00000556237 SUPT3HB4E1H0 165 aa6.21□□□□□ -1.42
HIF1A-208ENST00000556237 UBXN8O00124 270 aa6.21□□□□□ -1.42
HIF1A-208ENST00000556237 SGTAO43765 313 aa6.21□□□□□ -1.42
HIF1A-208ENST00000556237 VEGFDO43915 354 aa6.21□□□□□ -1.42
HIF1A-208ENST00000556237 SNX3O60493 162 aa6.21□□□□□ -1.42
HIF1A-208ENST00000556237 H2AFYO75367 372 aaKnown RBP6.21□□□□□ -1.42
HIF1A-208ENST00000556237 SUPT3HO75486 399 aa6.21□□□□□ -1.42
HIF1A-208ENST00000556237 LYPLA1O75608 230 aaPredicted RBP6.21□□□□□ -1.42
HIF1A-208ENST00000556237 POP7O75817 140 aaKnown RBP6.21□□□□□ -1.42
HIF1A-208ENST00000556237 HSPA4LO95757 839 aa6.21□□□□□ -1.42
HIF1A-208ENST00000556237 TSPAN12O95859 305 aa6.21□□□□□ -1.42
HIF1A-208ENST00000556237 SOD1P00441 154 aa6.21□□□□□ -1.42
HIF1A-208ENST00000556237 FTH1P02794 183 aa6.21□□□□□ -1.42
HIF1A-208ENST00000556237 CBSLP0DN79 551 aa6.21□□□□□ -1.42
HIF1A-208ENST00000556237 TROVE2P10155 538 aaKnown RBP eCLIP6.21□□□□□ -1.42
HIF1A-208ENST00000556237 KITP10721 976 aa6.21□□□□□ -1.42
HIF1A-208ENST00000556237 GFAPP14136 432 aa6.21□□□□□ -1.42
HIF1A-208ENST00000556237 ZNF8P17098 575 aaPredicted RBP6.21□□□□□ -1.42
HIF1A-208ENST00000556237 IMPDH1P20839 514 aa6.21□□□□□ -1.42
HIF1A-208ENST00000556237 ACSL1P33121 698 aa6.21□□□□□ -1.42
HIF1A-208ENST00000556237 CBSP35520 551 aa6.21□□□□□ -1.42
HIF1A-208ENST00000556237 TPMTP51580 245 aa6.21□□□□□ -1.42
HIF1A-208ENST00000556237 DGKEP52429 567 aa6.21□□□□□ -1.42
HIF1A-208ENST00000556237 CTSCP53634 463 aa6.21□□□□□ -1.42
HIF1A-208ENST00000556237 ADPRHP54922 357 aa6.21□□□□□ -1.42
HIF1A-208ENST00000556237 DNAJB13P59910 316 aa6.21□□□□□ -1.42
HIF1A-208ENST00000556237 HSPA14Q0VDF9 509 aa6.21□□□□□ -1.42
HIF1A-208ENST00000556237 OVGP1Q12889 678 aa6.21□□□□□ -1.42
HIF1A-208ENST00000556237 ABRQ12979 859 aa6.21□□□□□ -1.42
HIF1A-208ENST00000556237 FGL2Q14314 439 aa6.21□□□□□ -1.42
HIF1A-208ENST00000556237 TSNQ15631 228 aaKnown RBP6.21□□□□□ -1.42
HIF1A-208ENST00000556237 PLEKHS1Q5SXH7 462 aa6.21□□□□□ -1.42
HIF1A-208ENST00000556237 CES4AQ5XG92 561 aa6.21□□□□□ -1.42
HIF1A-208ENST00000556237 SYT13Q7L8C5 426 aa6.21□□□□□ -1.42
HIF1A-208ENST00000556237 PIWIL4Q7Z3Z4 852 aaKnown RBP6.21□□□□□ -1.42
HIF1A-208ENST00000556237 SPATA21Q7Z572 469 aa6.21□□□□□ -1.42
HIF1A-208ENST00000556237 TRIM74Q86UV6 250 aa6.21□□□□□ -1.42
HIF1A-208ENST00000556237 SLC22A9Q8IVM8 553 aa6.21□□□□□ -1.42
HIF1A-208ENST00000556237 CFAP206Q8IYR0 622 aa6.21□□□□□ -1.42
HIF1A-208ENST00000556237 CACNA2D3Q8IZS8 1091 aa6.21□□□□□ -1.42
HIF1A-208ENST00000556237 TP53I13Q8NBR0 393 aaPredicted RBP6.21□□□□□ -1.42
HIF1A-208ENST00000556237 CCDC197Q8NCU1 140 aa6.21□□□□□ -1.42
HIF1A-208ENST00000556237 OR6Y1Q8NGX8 325 aa6.21□□□□□ -1.42
HIF1A-208ENST00000556237 RHEBL1Q8TAI7 183 aa6.21□□□□□ -1.42
HIF1A-208ENST00000556237 PPP4R1Q8TF05 950 aa6.21□□□□□ -1.42
HIF1A-208ENST00000556237 SKA2Q8WVK7 121 aaPredicted RBP6.21□□□□□ -1.42
HIF1A-208ENST00000556237 FAM131CQ96AQ9 280 aa6.21□□□□□ -1.42
HIF1A-208ENST00000556237 ATOH8Q96SQ7 321 aa6.21□□□□□ -1.42
HIF1A-208ENST00000556237 FAM126AQ9BYI3 521 aaPredicted RBP6.21□□□□□ -1.42
HIF1A-208ENST00000556237 TRIM54Q9BYV2 358 aa6.21□□□□□ -1.42
HIF1A-208ENST00000556237 TRIM55Q9BYV6 548 aa6.21□□□□□ -1.42
HIF1A-208ENST00000556237 C20orf27Q9GZN8 174 aa6.21□□□□□ -1.42
HIF1A-208ENST00000556237 PRDM14Q9GZV8 571 aa6.21□□□□□ -1.42
HIF1A-208ENST00000556237 BTBD1Q9H0C5 482 aa6.21□□□□□ -1.42
HIF1A-208ENST00000556237 ILKAPQ9H0C8 392 aaPredicted RBP6.21□□□□□ -1.42
HIF1A-208ENST00000556237 OR2AG1Q9H205 316 aa6.21□□□□□ -1.42
HIF1A-208ENST00000556237 EPHX3Q9H6B9 360 aa6.21□□□□□ -1.42
HIF1A-208ENST00000556237 SGK2Q9HBY8 427 aa6.21□□□□□ -1.42
HIF1A-208ENST00000556237 NCKIPSDQ9NZQ3 722 aa6.21□□□□□ -1.42
HIF1A-208ENST00000556237 CD274Q9NZQ7 290 aa6.21□□□□□ -1.42
HIF1A-208ENST00000556237 THEGQ9P2T0 379 aa6.21□□□□□ -1.42
HIF1A-208ENST00000556237 ATXN10Q9UBB4 475 aa6.21□□□□□ -1.42
HIF1A-208ENST00000556237 FZD4Q9ULV1 537 aa6.21□□□□□ -1.42
HIF1A-208ENST00000556237 CHD9Q3L8U1 2897 aa6.21□□□□□ -1.42
HIF1A-208ENST00000556237 MUC22E2RYF6 1773 aaPredicted RBP6.21□□□□□ -1.42
HIF1A-208ENST00000556237 F5P12259 2224 aa6.21□□□□□ -1.42
HIF1A-208ENST00000556237 CHD7Q9P2D1 2997 aa6.21□□□□□ -1.42
HIF1A-208ENST00000556237 CCDC189A1A4V9 331 aa6.2□□□□□ -1.42
HIF1A-208ENST00000556237 NCF1BA6NI72 391 aaPredicted RBP6.2□□□□□ -1.42
HIF1A-208ENST00000556237 SYCE1LA8MT33 242 aa6.2□□□□□ -1.42
HIF1A-208ENST00000556237 NCF1CA8MVU1 366 aaPredicted RBP6.2□□□□□ -1.42
HIF1A-208ENST00000556237 EBAG9O00559 213 aa6.2□□□□□ -1.42
HIF1A-208ENST00000556237 SHOXO15266 292 aa6.2□□□□□ -1.42
HIF1A-208ENST00000556237 RAD51BO15315 384 aa6.2□□□□□ -1.42
HIF1A-208ENST00000556237 NPHS1O60500 1241 aa6.2□□□□□ -1.42
HIF1A-208ENST00000556237 SNX2O60749 519 aa6.2□□□□□ -1.42
HIF1A-208ENST00000556237 KERAO60938 352 aa6.2□□□□□ -1.42
HIF1A-208ENST00000556237 SNNO75324 88 aaPredicted RBP6.2□□□□□ -1.42
HIF1A-208ENST00000556237 GPC4O75487 556 aa6.2□□□□□ -1.42
HIF1A-208ENST00000556237 IPO13O94829 963 aaKnown RBP6.2□□□□□ -1.42
HIF1A-208ENST00000556237 SUPT7LO94864 414 aa6.2□□□□□ -1.42
HIF1A-208ENST00000556237 TGDSO95455 350 aa6.2□□□□□ -1.42
HIF1A-208ENST00000556237 HPXP02790 462 aa6.2□□□□□ -1.42
HIF1A-208ENST00000556237 S100BP04271 92 aaPredicted RBP6.2□□□□□ -1.42
HIF1A-208ENST00000556237 MPC1LP0DKB6 136 aa6.2□□□□□ -1.42
HIF1A-208ENST00000556237 ENO3P13929 434 aaPredicted RBP6.2□□□□□ -1.42
HIF1A-208ENST00000556237 MTHFD2P13995 350 aa6.2□□□□□ -1.42
HIF1A-208ENST00000556237 NCF1P14598 390 aaPredicted RBP6.2□□□□□ -1.42
HIF1A-208ENST00000556237 TEAD1P28347 426 aa6.2□□□□□ -1.42
HIF1A-208ENST00000556237 TPP2P29144 1249 aaPredicted RBP6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms