RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 PLCL1Q15111 1095 aa10.71□□□□□ -0.69
TMEM260-208ENST00000555905 PCBP2Q15366 365 aaKnown RBP eCLIP10.71□□□□□ -0.69
TMEM260-208ENST00000555905 SHBQ15464 509 aa10.71□□□□□ -0.69
TMEM260-208ENST00000555905 CCDC6Q16204 474 aa10.71□□□□□ -0.69
TMEM260-208ENST00000555905 PLA2G2CQ5R387 149 aa10.71□□□□□ -0.69
TMEM260-208ENST00000555905 ZNF678Q5SXM1 525 aa10.71□□□□□ -0.69
TMEM260-208ENST00000555905 RALGAPA1Q6GYQ0 2036 aa10.71□□□□□ -0.69
TMEM260-208ENST00000555905 WDFY4Q6ZS81 3184 aa10.71□□□□□ -0.69
TMEM260-208ENST00000555905 RGS9BPQ6ZS82 235 aa10.71□□□□□ -0.69
TMEM260-208ENST00000555905 ZCCHC23Q6ZST2 131 aa10.71□□□□□ -0.69
TMEM260-208ENST00000555905 SYTL1Q8IYJ3 562 aa10.71□□□□□ -0.69
TMEM260-208ENST00000555905 NAGSQ8N159 534 aa10.71□□□□□ -0.69
TMEM260-208ENST00000555905 SLC25A45Q8N413 288 aa10.71□□□□□ -0.69
TMEM260-208ENST00000555905 OR52E1Q8NGJ3 308 aa10.71□□□□□ -0.69
TMEM260-208ENST00000555905 SLC37A2Q8TED4 501 aa10.71□□□□□ -0.69
TMEM260-208ENST00000555905 LCN9Q8WX39 176 aa10.71□□□□□ -0.69
TMEM260-208ENST00000555905 MED8Q96G25 268 aa10.71□□□□□ -0.69
TMEM260-208ENST00000555905 CNDP1Q96KN2 507 aa10.71□□□□□ -0.69
TMEM260-208ENST00000555905 TRMOQ9BU70 441 aa10.71□□□□□ -0.69
TMEM260-208ENST00000555905 DUSP23Q9BVJ7 150 aa10.71□□□□□ -0.69
TMEM260-208ENST00000555905 GATA5Q9BWX5 397 aaPredicted RBP10.71□□□□□ -0.69
TMEM260-208ENST00000555905 C1QTNF3Q9BXJ4 246 aa10.71□□□□□ -0.69
TMEM260-208ENST00000555905 KCNH6Q9H252 994 aa10.71□□□□□ -0.69
TMEM260-208ENST00000555905 CCDC134Q9H6E4 229 aa10.71□□□□□ -0.69
TMEM260-208ENST00000555905 SLC40A1Q9NP59 571 aa10.71□□□□□ -0.69
TMEM260-208ENST00000555905 NLGN3Q9NZ94 848 aa10.71□□□□□ -0.69
TMEM260-208ENST00000555905 OPTCQ9UBM4 332 aa10.71□□□□□ -0.69
TMEM260-208ENST00000555905 ADAM21Q9UKJ8 722 aa10.71□□□□□ -0.69
TMEM260-208ENST00000555905 PLAGL1Q9UM63 463 aa10.71□□□□□ -0.69
TMEM260-208ENST00000555905 PRAMEF33A0A0G2JMD5 474 aa10.7□□□□□ -0.7
TMEM260-208ENST00000555905 KRT87PA6NCN2 255 aa10.7□□□□□ -0.7
TMEM260-208ENST00000555905 TCP11X1B4DZS4 312 aa10.7□□□□□ -0.7
TMEM260-208ENST00000555905 K7EPI3 171 aa10.7□□□□□ -0.7
TMEM260-208ENST00000555905 WDR47O94967 919 aa10.7□□□□□ -0.7
TMEM260-208ENST00000555905 SNUPNO95149 360 aaKnown RBP10.7□□□□□ -0.7
TMEM260-208ENST00000555905 HSPA4LO95757 839 aa10.7□□□□□ -0.7
TMEM260-208ENST00000555905 RPS17P08708 135 aaKnown RBP10.7□□□□□ -0.7
TMEM260-208ENST00000555905 CCND1P24385 295 aa10.7□□□□□ -0.7
TMEM260-208ENST00000555905 IMPA1P29218 277 aa10.7□□□□□ -0.7
TMEM260-208ENST00000555905 SHMT2P34897 504 aa10.7□□□□□ -0.7
TMEM260-208ENST00000555905 SLC1A6P48664 564 aa10.7□□□□□ -0.7
TMEM260-208ENST00000555905 RAB28P51157 221 aa10.7□□□□□ -0.7
TMEM260-208ENST00000555905 ABCE1P61221 599 aaKnown RBP10.7□□□□□ -0.7
TMEM260-208ENST00000555905 HHEXQ03014 270 aa10.7□□□□□ -0.7
TMEM260-208ENST00000555905 BST1Q10588 318 aa10.7□□□□□ -0.7
TMEM260-208ENST00000555905 NAE1Q13564 534 aa10.7□□□□□ -0.7
TMEM260-208ENST00000555905 TSTA3Q13630 321 aaPredicted RBP10.7□□□□□ -0.7
TMEM260-208ENST00000555905 GTF2H2Q13888 395 aa10.7□□□□□ -0.7
TMEM260-208ENST00000555905 RCN2Q14257 317 aa10.7□□□□□ -0.7
TMEM260-208ENST00000555905 GRB7Q14451 532 aa10.7□□□□□ -0.7
TMEM260-208ENST00000555905 CYP2A13Q16696 494 aa10.7□□□□□ -0.7
TMEM260-208ENST00000555905 C18orf21Q32NC0 220 aaPredicted RBP10.7□□□□□ -0.7
TMEM260-208ENST00000555905 PTCHD3Q3KNS1 767 aa10.7□□□□□ -0.7
TMEM260-208ENST00000555905 C14orf28Q4W4Y0 310 aa10.7□□□□□ -0.7
TMEM260-208ENST00000555905 UNC50Q53HI1 259 aa10.7□□□□□ -0.7
TMEM260-208ENST00000555905 FBXO48Q5FWF7 155 aa10.7□□□□□ -0.7
TMEM260-208ENST00000555905 C6orf132Q5T0Z8 1188 aa10.7□□□□□ -0.7
TMEM260-208ENST00000555905 CAPN13Q6MZZ7 669 aaPredicted RBP10.7□□□□□ -0.7
TMEM260-208ENST00000555905 GTF2H2CQ6P1K8 395 aa10.7□□□□□ -0.7
TMEM260-208ENST00000555905 OGFOD3Q6PK18 319 aa10.7□□□□□ -0.7
TMEM260-208ENST00000555905 FRMD7Q6ZUT3 714 aa10.7□□□□□ -0.7
TMEM260-208ENST00000555905 LRRC70Q7Z2Q7 622 aa10.7□□□□□ -0.7
TMEM260-208ENST00000555905 SNX31Q8N9S9 440 aa10.7□□□□□ -0.7
TMEM260-208ENST00000555905 SUMF1Q8NBK3 374 aa10.7□□□□□ -0.7
TMEM260-208ENST00000555905 OR6Y1Q8NGX8 325 aa10.7□□□□□ -0.7
TMEM260-208ENST00000555905 SAP25Q8TEE9 199 aa10.7□□□□□ -0.7
TMEM260-208ENST00000555905 ZNF480Q8WV37 535 aa10.7□□□□□ -0.7
TMEM260-208ENST00000555905 PATE1Q8WXA2 126 aa10.7□□□□□ -0.7
TMEM260-208ENST00000555905 ESAMQ96AP7 390 aa10.7□□□□□ -0.7
TMEM260-208ENST00000555905 SH3KBP1Q96B97 665 aa10.7□□□□□ -0.7
TMEM260-208ENST00000555905 TMEM79Q9BSE2 394 aa10.7□□□□□ -0.7
TMEM260-208ENST00000555905 DRC3Q9H069 523 aa10.7□□□□□ -0.7
TMEM260-208ENST00000555905 ATG10Q9H0Y0 220 aa10.7□□□□□ -0.7
TMEM260-208ENST00000555905 SRMSQ9H3Y6 488 aa10.7□□□□□ -0.7
TMEM260-208ENST00000555905 SMOC1Q9H4F8 434 aa10.7□□□□□ -0.7
TMEM260-208ENST00000555905 SLC32A1Q9H598 525 aa10.7□□□□□ -0.7
TMEM260-208ENST00000555905 IL21RQ9HBE5 538 aa10.7□□□□□ -0.7
TMEM260-208ENST00000555905 EML4Q9HC35 981 aaKnown RBP10.7□□□□□ -0.7
TMEM260-208ENST00000555905 CCDC177Q9NQR7 707 aaPredicted RBP10.7□□□□□ -0.7
TMEM260-208ENST00000555905 THAP1Q9NVV9 213 aa10.7□□□□□ -0.7
TMEM260-208ENST00000555905 PCTPQ9UKL6 214 aa10.7□□□□□ -0.7
TMEM260-208ENST00000555905 STK38LQ9Y2H1 464 aa10.7□□□□□ -0.7
TMEM260-208ENST00000555905 LRRC14BA6NHZ5 514 aa10.69□□□□□ -0.7
TMEM260-208ENST00000555905 E2F3O00716 465 aa10.69□□□□□ -0.7
TMEM260-208ENST00000555905 GIPC1O14908 333 aa10.69□□□□□ -0.7
TMEM260-208ENST00000555905 PCDHGA12O60330 932 aa10.69□□□□□ -0.7
TMEM260-208ENST00000555905 NOBOXO60393 691 aa10.69□□□□□ -0.7
TMEM260-208ENST00000555905 KATNA1O75449 491 aa10.69□□□□□ -0.7
TMEM260-208ENST00000555905 MLYCDO95822 493 aa10.69□□□□□ -0.7
TMEM260-208ENST00000555905 VIMP08670 466 aaKnown RBP10.69□□□□□ -0.7
TMEM260-208ENST00000555905 ZNF806P0C7X5 589 aa10.69□□□□□ -0.7
TMEM260-208ENST00000555905 ERGP11308 486 aa10.69□□□□□ -0.7
TMEM260-208ENST00000555905 EPB42P16452 691 aa10.69□□□□□ -0.7
TMEM260-208ENST00000555905 PKLRP30613 574 aa10.69□□□□□ -0.7
TMEM260-208ENST00000555905 LSP1P33241 339 aa10.69□□□□□ -0.7
TMEM260-208ENST00000555905 GDF5P43026 501 aa10.69□□□□□ -0.7
TMEM260-208ENST00000555905 FASLGP48023 281 aa10.69□□□□□ -0.7
TMEM260-208ENST00000555905 SLC6A12P48065 614 aa10.69□□□□□ -0.7
TMEM260-208ENST00000555905 MAZP56270 477 aaKnown RBP10.69□□□□□ -0.7
TMEM260-208ENST00000555905 CLCQ05315 142 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms