RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 RASGRF2O14827 1237 aa12.22□□□□□ -0.45
HNRNPC-221ENST00000555883 CD3EAPO15446 510 aaKnown RBP12.22□□□□□ -0.45
HNRNPC-221ENST00000555883 HCRTR1O43613 425 aa12.22□□□□□ -0.45
HNRNPC-221ENST00000555883 ETS1P14921 441 aa12.22□□□□□ -0.45
HNRNPC-221ENST00000555883 ATP5DP30049 168 aa12.22□□□□□ -0.45
HNRNPC-221ENST00000555883 ARSFP54793 590 aa12.22□□□□□ -0.45
HNRNPC-221ENST00000555883 MLLT10P55197 1068 aa12.22□□□□□ -0.45
HNRNPC-221ENST00000555883 SNX1Q13596 522 aa12.22□□□□□ -0.45
HNRNPC-221ENST00000555883 ATP1A4Q13733 1029 aa12.22□□□□□ -0.45
HNRNPC-221ENST00000555883 GRB7Q14451 532 aa12.22□□□□□ -0.45
HNRNPC-221ENST00000555883 NKAIN1Q4KMZ8 207 aa12.22□□□□□ -0.45
HNRNPC-221ENST00000555883 ZC3H12BQ5HYM0 836 aaKnown RBP12.22□□□□□ -0.45
HNRNPC-221ENST00000555883 RNF187Q5TA31 235 aaPredicted RBP12.22□□□□□ -0.45
HNRNPC-221ENST00000555883 NAPRTQ6XQN6 538 aa12.22□□□□□ -0.45
HNRNPC-221ENST00000555883 VRK3Q8IV63 474 aa12.22□□□□□ -0.45
HNRNPC-221ENST00000555883 FDCSPQ8NFU4 85 aa12.22□□□□□ -0.45
HNRNPC-221ENST00000555883 TRIM58Q8NG06 486 aa12.22□□□□□ -0.45
HNRNPC-221ENST00000555883 CPT1CQ8TCG5 803 aa12.22□□□□□ -0.45
HNRNPC-221ENST00000555883 ZUFSPQ96AP4 578 aa12.22□□□□□ -0.45
HNRNPC-221ENST00000555883 ZNF285Q96NJ3 590 aa12.22□□□□□ -0.45
HNRNPC-221ENST00000555883 NDC1Q9BTX1 674 aa12.22□□□□□ -0.45
HNRNPC-221ENST00000555883 KIFC1Q9BW19 673 aa12.22□□□□□ -0.45
HNRNPC-221ENST00000555883 SPRTNQ9H040 489 aaPredicted RBP12.22□□□□□ -0.45
HNRNPC-221ENST00000555883 TXLNGQ9NUQ3 528 aa12.22□□□□□ -0.45
HNRNPC-221ENST00000555883 EURLQ9NYK6 297 aa12.22□□□□□ -0.45
HNRNPC-221ENST00000555883 BFARQ9NZS9 450 aa12.22□□□□□ -0.45
HNRNPC-221ENST00000555883 IFT80Q9P2H3 777 aaPredicted RBP12.22□□□□□ -0.45
HNRNPC-221ENST00000555883 NDOR1Q9UHB4 597 aa12.22□□□□□ -0.45
HNRNPC-221ENST00000555883 GPN3Q9UHW5 284 aaPredicted RBP12.22□□□□□ -0.45
HNRNPC-221ENST00000555883 MAP4K5Q9Y4K4 846 aa12.22□□□□□ -0.45
HNRNPC-221ENST00000555883 H3BMM5 538 aa12.21□□□□□ -0.45
HNRNPC-221ENST00000555883 PRICKLE3O43900 615 aaPredicted RBP12.21□□□□□ -0.45
HNRNPC-221ENST00000555883 VPS4BO75351 444 aa12.21□□□□□ -0.45
HNRNPC-221ENST00000555883 ALBP02768 609 aa12.21□□□□□ -0.45
HNRNPC-221ENST00000555883 CCDC175P0C221 793 aa12.21□□□□□ -0.45
HNRNPC-221ENST00000555883 ZSCAN5DPP0CG00 497 aa12.21□□□□□ -0.45
HNRNPC-221ENST00000555883 CBSLP0DN79 551 aa12.21□□□□□ -0.45
HNRNPC-221ENST00000555883 PIM1P11309 404 aaPredicted RBP12.21□□□□□ -0.45
HNRNPC-221ENST00000555883 TPSB2P20231 275 aa12.21□□□□□ -0.45
HNRNPC-221ENST00000555883 MAGP20916 626 aa12.21□□□□□ -0.45
HNRNPC-221ENST00000555883 CBSP35520 551 aa12.21□□□□□ -0.45
HNRNPC-221ENST00000555883 CCNFP41002 786 aa12.21□□□□□ -0.45
HNRNPC-221ENST00000555883 FOLR3P41439 243 aa12.21□□□□□ -0.45
HNRNPC-221ENST00000555883 TPSAB1Q15661 275 aa12.21□□□□□ -0.45
HNRNPC-221ENST00000555883 TYSND1Q2T9J0 566 aa12.21□□□□□ -0.45
HNRNPC-221ENST00000555883 DEFB110Q30KQ9 67 aa12.21□□□□□ -0.45
HNRNPC-221ENST00000555883 NADK2Q4G0N4 442 aa12.21□□□□□ -0.45
HNRNPC-221ENST00000555883 TCTE1Q5JU00 501 aa12.21□□□□□ -0.45
HNRNPC-221ENST00000555883 DCAF10Q5QP82 559 aa12.21□□□□□ -0.45
HNRNPC-221ENST00000555883 VWA5B1Q5TIE3 1220 aa12.21□□□□□ -0.45
HNRNPC-221ENST00000555883 PTRHD1Q6GMV3 140 aaKnown RBP12.21□□□□□ -0.45
HNRNPC-221ENST00000555883 MRNIPQ6NTE8 343 aa12.21□□□□□ -0.45
HNRNPC-221ENST00000555883 JMJD6Q6NYC1 403 aaPredicted RBP12.21□□□□□ -0.45
HNRNPC-221ENST00000555883 TTC23LQ6PF05 361 aa12.21□□□□□ -0.45
HNRNPC-221ENST00000555883 IGFL3Q6UXB1 125 aa12.21□□□□□ -0.45
HNRNPC-221ENST00000555883 PRUNE1Q86TP1 453 aa12.21□□□□□ -0.45
HNRNPC-221ENST00000555883 RAB42Q8N4Z0 105 aa12.21□□□□□ -0.45
HNRNPC-221ENST00000555883 ZNF655Q8N720 491 aaPredicted RBP12.21□□□□□ -0.45
HNRNPC-221ENST00000555883 EFCAB3Q8N7B9 438 aa12.21□□□□□ -0.45
HNRNPC-221ENST00000555883 CLEC1AQ8NC01 280 aa12.21□□□□□ -0.45
HNRNPC-221ENST00000555883 GSDMBQ8TAX9 411 aa12.21□□□□□ -0.45
HNRNPC-221ENST00000555883 LKAAEAR1Q8TD35 194 aa12.21□□□□□ -0.45
HNRNPC-221ENST00000555883 MAGEC3Q8TD91 643 aa12.21□□□□□ -0.45
HNRNPC-221ENST00000555883 PNPLA2Q96AD5 504 aa12.21□□□□□ -0.45
HNRNPC-221ENST00000555883 RAD51AP1Q96B01 352 aa12.21□□□□□ -0.45
HNRNPC-221ENST00000555883 PTERQ96BW5 349 aa12.21□□□□□ -0.45
HNRNPC-221ENST00000555883 TCF12Q99081 682 aa12.21□□□□□ -0.45
HNRNPC-221ENST00000555883 NUDT9Q9BW91 350 aa12.21□□□□□ -0.45
HNRNPC-221ENST00000555883 SLC26A1Q9H2B4 701 aa12.21□□□□□ -0.45
HNRNPC-221ENST00000555883 WDR54Q9H977 334 aa12.21□□□□□ -0.45
HNRNPC-221ENST00000555883 IL1RAPL1Q9NZN1 696 aa12.21□□□□□ -0.45
HNRNPC-221ENST00000555883 MARCH4Q9P2E8 410 aaPredicted RBP12.21□□□□□ -0.45
HNRNPC-221ENST00000555883 DHCR7Q9UBM7 475 aaKnown RBP12.21□□□□□ -0.45
HNRNPC-221ENST00000555883 PLAGL1Q9UM63 463 aa12.21□□□□□ -0.45
HNRNPC-221ENST00000555883 VPS4AQ9UN37 437 aa12.21□□□□□ -0.45
HNRNPC-221ENST00000555883 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.2□□□□□ -0.46
HNRNPC-221ENST00000555883 A0A1B0GX78 115 aa12.2□□□□□ -0.46
HNRNPC-221ENST00000555883 FITM1A5D6W6 292 aa12.2□□□□□ -0.46
HNRNPC-221ENST00000555883 IQCF5A8MTL0 148 aa12.2□□□□□ -0.46
HNRNPC-221ENST00000555883 PEX12O00623 359 aa12.2□□□□□ -0.46
HNRNPC-221ENST00000555883 PFDN6O15212 129 aa12.2□□□□□ -0.46
HNRNPC-221ENST00000555883 SRPX2O60687 465 aaPredicted RBP12.2□□□□□ -0.46
HNRNPC-221ENST00000555883 NDUFS3O75489 264 aa12.2□□□□□ -0.46
HNRNPC-221ENST00000555883 IPO13O94829 963 aaKnown RBP12.2□□□□□ -0.46
HNRNPC-221ENST00000555883 C1orf105O95561 183 aa12.2□□□□□ -0.46
HNRNPC-221ENST00000555883 FGGP02679 453 aa12.2□□□□□ -0.46
HNRNPC-221ENST00000555883 ALPPP05187 535 aa12.2□□□□□ -0.46
HNRNPC-221ENST00000555883 ARNTP27540 789 aa12.2□□□□□ -0.46
HNRNPC-221ENST00000555883 MAGEA6P43360 314 aa12.2□□□□□ -0.46
HNRNPC-221ENST00000555883 SESN2P58004 480 aaPredicted RBP12.2□□□□□ -0.46
HNRNPC-221ENST00000555883 BASP1P80723 227 aaKnown RBP12.2□□□□□ -0.46
HNRNPC-221ENST00000555883 GBX1Q14549 363 aa12.2□□□□□ -0.46
HNRNPC-221ENST00000555883 MYBPC3Q14896 1274 aa12.2□□□□□ -0.46
HNRNPC-221ENST00000555883 NAA25Q14CX7 972 aa12.2□□□□□ -0.46
HNRNPC-221ENST00000555883 FAM69BQ5VUD6 431 aa12.2□□□□□ -0.46
HNRNPC-221ENST00000555883 MLIPQ5VWP3 458 aa12.2□□□□□ -0.46
HNRNPC-221ENST00000555883 LRRC8BQ6P9F7 803 aa12.2□□□□□ -0.46
HNRNPC-221ENST00000555883 OTOAQ7RTW8 1153 aa12.2□□□□□ -0.46
HNRNPC-221ENST00000555883 SDCCAG8Q86SQ7 713 aaPredicted RBP12.2□□□□□ -0.46
HNRNPC-221ENST00000555883 MCATQ8IVS2 390 aaKnown RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms